Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,614,823 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,614,8230GC99.6% 562.0 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (103/133);  total (103/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,614,8240CG99.6% 553.1 / NA 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base G (103/133);  total (103/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,614,8250TA99.2% 548.4 / ‑6.4 237intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (102/131);  minor base G (1/1);  total (103/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 237 total aligned reads displayed.

GCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTTAT  >  CP042583/1614548‑1615103
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                      
gcggTCAAGGCATAGCGCAGCGCGGAAGCCGGAGGAACAAAAGAAGGGCCTGGCAACTGCATCCCCATAAACTCCGCCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGcc                                                                                                                                                                                                                                                                              <  2:1603474/288‑1 (MQ=255)
gcggTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGcc                                                                                                                                                                                                                                                                              <  2:1523003/288‑1 (MQ=255)
        aGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAg                                                                                                                                                                                                                                                                      >  1:479062/1‑288 (MQ=255)
             cgcgCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCgg                                                                                                                                                                                                                                                                >  1:1104215/1‑289 (MQ=255)
              gcgcAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTGTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCggg                                                                                                                                                                                                                                                               >  1:1819901/1‑289 (MQ=255)
                     ggAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACaa                                                                                                                                                                                                                                                           <  1:1329609/286‑1 (MQ=255)
                     ggAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATc                                                                                                                                                                                                                                                         <  1:67201/288‑1 (MQ=255)
                       agaATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTg                                                                                                                                                                                                                                                      >  2:320129/1‑289 (MQ=255)
                            ccGGAGGGAAAAAAGAAGACCCAGGCAACTTCATCCCCATAGACTCCCCCACCATCTGGATGGTGTTGGCAGAACCGTTGCAAGGACATGTTCCCGGGCCAGGGTAAGAGGTGGCTTCTGACTCCAGTAAGCCCATGCGGTCCACTTTATCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTGATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAGCACCGCAGGGAAATGCCCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAAGCTTGTCGca                                                                                                                                                                                                                                                 <  2:667227/289‑1 (MQ=255)
                              ggATGAACAAAAGGAGAGCCTGGCAACTGCATCCCACTCAACTCCACCCCCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                               <  2:1047712/289‑1 (MQ=255)
                              ggATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                               <  1:267733/289‑1 (MQ=255)
                              ggATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGATTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                               <  1:1173123/289‑1 (MQ=255)
                                 tGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATGTTGTCGcacaca                                                                                                                                                                                                                                             <  1:403170/288‑1 (MQ=255)
                                   aaCAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCg                                                                                                                                                                                                                                          >  1:1729346/1‑289 (MQ=255)
                                    aCAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGGTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCg                                                                                                                                                                                                                                          <  2:1186534/288‑1 (MQ=255)
                                     aaaaaGAAGAGCCTGCCAACTGCAGCCCCGTCAACTCAACCGCCATCTGGTGAGTGATGGAAGTACCGTAGAAGGTACAGGGACCCGGTGCATGGTAAGACGCGGCTTCTGACTCCAGGAAGGACATGAGGTCCAGTATACCGTCGGCATAAAGCTAGGGAATACGCAATGTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCAACGTCAGACCCGGGACAATCTTGTCGCACACACCGAg                                                                                                                                                                                                                                        <  2:799186/288‑1 (MQ=255)
                                        aagaagAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGaa                                                                                                                                                                                                                                     <  1:1202407/289‑1 (MQ=255)
                                                ccTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCa                                                                                                                                                                                                                              >  1:890193/1‑288 (MQ=255)
                                                ccTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCa                                                                                                                                                                                                                              >  2:565723/1‑288 (MQ=255)
                                                  tGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCa                                                                                                                                                                                                                           >  2:731825/1‑289 (MQ=255)
                                                  tGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCa                                                                                                                                                                                                                           >  1:356617/1‑289 (MQ=255)
                                                         tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGGCAGGGCTGCCATCGTCAGACCCGGGACAATCTAGTCGCACACACCGAGCAACAGAGCACCACCAAACa                                                                                                                                                                                                                    >  2:490771/1‑289 (MQ=255)
                                                         tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    <  1:85371/289‑1 (MQ=255)
                                                         tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    <  1:314222/289‑1 (MQ=255)
                                                          gCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCAGCGTCAGACCCGGGACAATCTGGTCGCACACACCGAGGAACAGAGCACCATCAAACag                                                                                                                                                                                                                   >  1:1903717/1‑288 (MQ=255)
                                                             tCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAg                                                                                                                                                                                                                                        <  2:274059/265‑1 (MQ=255)
                                                              ccccATCAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTa                                                                                                                                                                                                               <  1:490771/289‑1 (MQ=255)
                                                                  aTAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTAAATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATggg                                                                                                                                                                                                           <  2:1486336/289‑1 (MQ=255)
                                                                     aaCTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACa                                                                                                                                                                                                        >  2:383220/1‑289 (MQ=255)
                                                                          caccaccaTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGccc                                                                                                                                                                                                    >  1:10907/1‑288 (MQ=255)
                                                                          caccaccaTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGccc                                                                                                                                                                                                    >  1:1522214/1‑288 (MQ=255)
                                                                             caccaTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGCCTCCCATCGTCAGACCCGGGACCACCTTGTCGCACCCACCGAGGAACCACGCACCATCAAACATGTTACGGGACAGcccccc                                                                                                                                                                                                 >  2:1848110/1‑286 (MQ=255)
                                                                                  tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                               <  1:1602395/237‑1 (MQ=255)
                                                                                  tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGccc                                                                                                                                                                                                    >  2:880315/1‑280 (MQ=255)
                                                                                  tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCAccgccg                                                                                                                                                                                            >  2:285826/1‑288 (MQ=255)
                                                                                  tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACcgccgc                                                                                                                                                                                           >  1:1675825/1‑289 (MQ=255)
                                                                                     ggttggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGa                                                                                                                                                                                        <  1:565723/289‑1 (MQ=255)
                                                                                          gtgtTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATc                                                                                                                                                                                    >  1:1797861/1‑288 (MQ=255)
                                                                                             ttGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGCGGACCAGAGCACCCCCAAACACGTTAAGGGACAGCCCCACCACCGCAGAccacgca                                                                                                                                                                                 >  2:1298634/1‑282 (MQ=255)
                                                                                                     gacGTAGAAAGAACATGTTCACGGAGCATGGTAAGACCGGTCTTCTGACTCCAGTAAGGCGATGTGGACCACGTTACCTTAGGCAAAAAGCTGGCGAATACGAACTTTTTCATTATTTGGCAAATCGCTTGCCAGCAGTCCAGACGGCACAAACACCGCAGGCAAATGAACAAACGACAGGGCTGCCATCGTCAGACCCGGGACGATCGCGTCGCACACACCGAGGAACAGAGCACCATCAAGCATGTTATGGGACAGCCCCACCGCGGCAGACATCGCTATCACTTcg                                                                                                                                                                        <  2:1141583/287‑1 (MQ=255)
                                                                                                     aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTc                                                                                                                                                                         >  1:387154/1‑288 (MQ=255)
                                                                                                     aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTc                                                                                                                                                                         >  2:1025743/1‑288 (MQ=255)
                                                                                                         tAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                                                                                                                                                       <  1:541613/270‑1 (MQ=255)
                                                                                                         tAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTcgcg                                                                                                                                                                      >  1:786760/1‑287 (MQ=255)
                                                                                                                tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTc                                                                                                                                                                                                                                                                        >  1:749365/1‑182 (MQ=255)
                                                                                                                 aCATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgc                                                                                                                                                            <  2:472559/289‑2 (MQ=255)
                                                                                                                   aTGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    >  1:622687/1‑231 (MQ=255)
                                                                                                                   aTGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    <  2:622687/231‑1 (MQ=255)
                                                                                                                   aTGTGCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATTCGGTCCAAGTTACATTCGGCATAAAGCAGGCGAATACGCACTGTTTCTTGATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcga                                                                                                                                                          <  2:1672580/289‑4 (MQ=255)
                                                                                                                        cccGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcgacaatt                                                                                                                                                     <  2:914128/289‑9 (MQ=255)
                                                                                                                        cccGGCGCATGGTAAGACGCGGCTTCTGACTCAAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCATGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcgacaatt                                                                                                                                                     <  1:827407/289‑9 (MQ=255)
                                                                                                                          cGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    >  2:903350/1‑224 (MQ=255)
                                                                                                                              gcATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAattccatt                                                                                                                                                <  2:393272/288‑1 (MQ=255)
                                                                                                                                   gTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACCTCGCGGCTTAGCAGCGACAATTCCATCCCCTc                                                                                                                                           >  1:821958/1‑288 (MQ=255)
                                                                                                                                            ggcttctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTgg                                                                                                                                 >  2:204576/10‑289 (MQ=255)
                                                                                                                                            ggcttctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTgg                                                                                                                                 >  2:479426/10‑289 (MQ=255)
                                                                                                                                                tctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGa                                                                                                                             <  1:1374375/284‑1 (MQ=255)
                                                                                                                                                tctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGa                                                                                                                             <  1:1576748/284‑1 (MQ=255)
                                                                                                                                                tatgactcCCGTAAGGCCATGCGGTGCACTTTACCTTCGGCATAAAGCAGGCGAATACGAACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGa                                                                                                                             <  2:1565498/284‑1 (MQ=255)
                                                                                                                                                  tgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGaca                                                                                                                           <  1:1025743/286‑1 (MQ=255)
                                                                                                                                                        cAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATc                                                                                                                      >  1:469171/1‑288 (MQ=255)
                                                                                                                                                         aGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTGAGCAGCGACAATTCCATTCCATCCTGcccc                                                                                                                                    <  1:1489955/273‑1 (MQ=255)
                                                                                                                                                            aaGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATcacac                                                                                                                  <  1:383220/288‑1 (MQ=255)
                                                                                                                                                            aaGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCATCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATcacac                                                                                                                  <  2:1377185/288‑1 (MQ=255)
                                                                                                                                                             aGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACAt                                                                                                                <  2:1797861/289‑1 (MQ=255)
                                                                                                                                                                ccATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCg                                                                                                              >  2:1746222/1‑288 (MQ=255)
                                                                                                                                                                  aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCg                                                                                                           >  1:1451395/1‑289 (MQ=255)
                                                                                                                                                                  aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCg                                                                                                           >  2:1691222/1‑289 (MQ=255)
                                                                                                                                                                   tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGTGACAATCTTGTCGCACACACCGAGGATCAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCgg                                                                                                          >  1:95/1‑289 (MQ=255)
                                                                                                                                                                   tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCCAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCgg                                                                                                          >  1:64167/1‑289 (MQ=255)
                                                                                                                                                                   tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCgg                                                                                                          >  1:1422506/1‑289 (MQ=255)
                                                                                                                                                                   tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCgg                                                                                                          >  1:888069/1‑289 (MQ=255)
                                                                                                                                                                    gCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                    >  1:1008058/1‑182 (MQ=255)
                                                                                                                                                                        tCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGAAAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAacac                                                                                                     <  2:1168609/289‑1 (MQ=255)
                                                                                                                                                                         ccACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACagag                                                                                                                                                                                                                                <  1:698636/165‑1 (MQ=255)
                                                                                                                                                                                    tCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAAc                                                                                                                                                                                                                     >  2:385303/1‑165 (MQ=255)
                                                                                                                                                                                      ggCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTg                                                                                        >  1:1063978/1‑288 (MQ=255)
                                                                                                                                                                                                      aTACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCt                                                                        <  1:986630/288‑1 (MQ=255)
                                                                                                                                                                                                      aTACGCACTTTTTCTGTCTTTGGCAAACAGCGTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGACTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCTCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCt                                                                        <  2:865393/288‑1 (MQ=255)
                                                                                                                                                                                                       tACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcga                                                                                                                                                          <  2:528738/205‑4 (MQ=255)
                                                                                                                                                                                                            aCTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCa                                                                 >  2:579338/1‑289 (MQ=255)
                                                                                                                                                                                                                      tATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACg                                                       >  1:997073/1‑289 (MQ=255)
                                                                                                                                                                                                                         gtGGCAAACCGCTTGCCAGCGGTCCAGACGGCACAAACACCGCAGGCAAAGGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAAt                                                    <  1:90768/288‑1 (MQ=255)
                                                                                                                                                                                                                                   gCTTGCCATCGTGCCAGACGGAACCAACACCGCAGGCAAATGACCAAACGACAGGGCGGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGa                                          <  2:786760/289‑1 (MQ=255)
                                                                                                                                                                                                                                   gCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGa                                          <  1:204576/289‑1 (MQ=255)
                                                                                                                                                                                                                                       gCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAgt                                      <  2:826768/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         acaAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCAc                                                                                                                                                                                                 >  2:439473/1‑116 (MQ=255)
                                                                                                                                                                                                                                                         acaAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCAc                                                                                                                                                                                                 <  1:439473/116‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaaCACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGcgcg                  <  1:278876/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaaCACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGcgcg                  <  1:1128475/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aaacccGCAGGAAAAGGCCCAAACGCAAGGGCTGCCATCGTCATACCCTGAATCAACTTGTCGCACACACCGAGGAACAAAGCAGCATCAAACATGTTATGGGACAGCCCCACCGCCACAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCACTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCgg                 <  2:1903717/285‑1 (MQ=255)
                                                                                                                                                                                                                                                             acacCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGga                <  2:1386425/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTAt                                                                                                                                                                               <  2:1109857/125‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCa           <  1:1788058/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCa           <  1:285826/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCAt          <  1:1166035/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCAt          <  2:837199/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCAt          <  1:579338/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aGGCAAATGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCAt          <  1:700944/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tGACCAAACGACAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTtat  <  2:10907/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                   |||                                                                                                                                                                                                                                                                                      
GCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGGCACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAGACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTTAT  >  CP042583/1614548‑1615103

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A