Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,614,823 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,614,8230GC100.0% 578.8 / NA 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (104/141);  total (104/141)
*CP0425831,614,8240CG99.2% 564.6 / ‑4.6 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/1);  major base G (103/139);  minor base A (1/1);  total (104/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,614,8250TA99.2% 576.1 / NA 245intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (104/139);  minor base G (0/2);  total (104/141)
Fisher's exact test for biased strand distribution p-value = 5.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 245 total aligned reads displayed.

TGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTTATA  >  CP042583/1614544‑1615104
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
tGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCt                                                                                                                                                                                                                                                                                   <  1:4791/289‑1 (MQ=255)
               aTCGCGCAGCGGAGAATCCGAATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑Acc                                                                                                                                                                                                                                                                    <  1:1907382/288‑1 (MQ=255)
                 cgcgCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCgg                                                                                                                                                                                                                                                                 >  1:1525329/1‑289 (MQ=255)
                  gcgcAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCggg                                                                                                                                                                                                                                                                >  1:243135/1‑289 (MQ=255)
                        cGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACaa                                                                                                                                                                                                                                                            >  2:296917/1‑287 (MQ=255)
                           agaATCCGGATGAACAAAAGAAGAGCCTTGCATCTGCATCCCCTTAAACTCCACCACCATCTGGTTGGTGTTGGCGGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGTTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCtt                                                                                                                                                                                                                                                        <  1:1852102/288‑1 (MQ=255)
                           agaATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCtt                                                                                                                                                                                                                                                        <  1:817774/288‑1 (MQ=255)
                           agaATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCtt                                                                                                                                                                                                                                                        <  1:83557/288‑1 (MQ=255)
                                ccGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCCTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGca                                                                                                                                                                                                                                                  <  1:964029/289‑1 (MQ=255)
                                ccGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGca                                                                                                                                                                                                                                                  <  1:1440356/289‑1 (MQ=255)
                                ccGGATGAACAAAAGAAGAGCCTGGCAACGGCATCCCCATGAACTCCACGACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGca                                                                                                                                                                                                                                                  <  2:921764/289‑1 (MQ=255)
                                  ggATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGcac                                                                                                                                                                                                                                                 >  1:1734720/1‑288 (MQ=255)
                                     tGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGcacaca                                                                                                                                                                                                                                              >  1:1550495/1‑288 (MQ=255)
                                       aaCAAAAGAAGAACCTGCAAACTGCCTCCCCCAAAACCCCCCCCCCATCGGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCg                                                                                                                                                                                                                                           <  2:1343529/289‑1 (MQ=255)
                                                     cTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCAcc                                                                                                                                                                                                                             <  1:1434792/289‑1 (MQ=255)
                                                           aatgactCCCCAAAACCCCCGCCGTCATCTGGTTGGTGTTGTCAGTACCTGAGAAAGTAAATGTTCCCTGCGCATGGTAAGACGCGGCTTCTGATTCCATTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTGGTCATCGCTCCAGACGG‑CACAAACAACGCAGGCAAATGACCAACCGACAGGGCTGCCATCGTCAG‑ACCCGGGACAAGCTTGTCGCACACACCGAGGAACAGAGCACCATCaaa                                                                                                                                                                                                                       <  2:82434/283‑1 (MQ=255)
                                                             tgtaTCCCCATGAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGTTTAAACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                     <  1:1811423/286‑1 (MQ=255)
                                                             tcaaTCCCCATAACCACACCCGCCCTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTATACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                     <  2:243135/286‑1 (MQ=255)
                                                             tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CCCAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGACAG‑CCCCGGGACAAACTTGTCGCCCACACCGAGGAACAGAGCACCACCAAAc                                                                                                                                                                                                                      >  2:1790625/1‑288 (MQ=255)
                                                             tGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                     <  1:1236863/289‑1 (MQ=255)
                                                                 tCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGAAAGGCTATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGCCAGCACCCGGG‑CAATCTCGTCACACACAACGAGGAACCGAGAACCAACAAACATGtg                                                                                                                                                                                                                 >  2:629700/1‑288 (MQ=255)
                                                                  ccccATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTa                                                                                                                                                                                                                >  1:1410605/1‑289 (MQ=255)
                                                                       tAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCaaa                                                                                                                                                                                                                       >  2:519131/1‑277 (MQ=255)
                                                                              caccaccaTCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGccc                                                                                                                                                                                                     >  1:1591202/1‑288 (MQ=255)
                                                                                      tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                >  1:1632160/1‑237 (MQ=255)
                                                                                      tCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGcaca                                                                                                                                                                                                                                                <  2:1632160/237‑1 (MQ=255)
                                                                                          gttggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACT‑CAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGcacaca                                                                                                                                                                                                                                              <  2:573576/234‑1 (MQ=255)
                                                                                           ttggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                                                                                                                                                        <  2:1517705/288‑1 (MQ=255)
                                                                                           ttggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGATGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACCTGTAATGGGACAGCCCCACgcccgccgcc                                                                                                                                                                                        >  2:17559/1‑284 (MQ=255)
                                                                                           gtggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCTGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGAc                                                                                                                                                                                        <  1:1393714/287‑1 (MQ=255)
                                                                                             ggtGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCAGCGTCAG‑ACCCGGGCCAATCTTGTCGCACACACCGAGGAACAGAGCACCATCACACATGTTATGGGACCGCCACACCGCCGCCGACac                                                                                                                                                                                      >  2:1052292/1‑287 (MQ=255)
                                                                                              gtgtTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                     >  2:652836/1‑256 (MQ=255)
                                                                                               tgtTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGCGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACACCg                                                                                                                                                                                    >  2:1149144/1‑288 (MQ=255)
                                                                                                   ggCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCg                                                                                                                                                                                                                                           <  1:534115/229‑1 (MQ=255)
                                                                                                         aCCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTc                                                                                                                                                                          >  2:1112935/1‑288 (MQ=255)
                                                                                                         aCCGTAGAAAGTACATGTGCCCGGCGCATGGTAAGACGCGGCTTCTGCCTCCAGTAAGGCCATGCGTTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTcg                                                                                                                                                                         <  2:30126/289‑1 (MQ=255)
                                                                                                            gTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCgg                                                                                                                                                                      <  1:1033519/289‑1 (MQ=255)
                                                                                                                  aGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCAccgcc                                                                                                                                                                                              <  1:911464/259‑1 (MQ=255)
                                                                                                                  aGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGc                                                                                                                                                                <  1:1174649/289‑1 (MQ=255)
                                                                                                                    tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑Acc                                                                                                                                                                                                                                                                    >  2:1438051/1‑187 (MQ=255)
                                                                                                                    tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCCCCATCACTTCGCGGCATAGCa                                                                                                                                                               >  2:1536645/1‑288 (MQ=255)
                                                                                                                    tACATGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCAACAAACATGATATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCa                                                                                                                                                               >  1:666070/1‑288 (MQ=255)
                                                                                                                       aTGTTCCCGGCGCATGGTAAGCCGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCCCTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcga                                                                                                                                                           <  2:419926/289‑4 (MQ=255)
                                                                                                                       aTGTTCCCGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAgcga                                                                                                                                                           <  2:1483170/289‑4 (MQ=255)
                                                                                                                              cGGCGCATGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGAc                                                                                                                                                                                                          >  1:1585622/1‑235 (MQ=255)
                                                                                                                                    aTGGTAAGACGCGGCTTCTGACTCCAGTAAGGGCATGCGGTCCTCTTTACCGTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTTCCATCGGTCCAGACGG‑CCAAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAAttccattcca                                                                                                                                              <  1:1361147/289‑1 (MQ=255)
                                                                                                                                    aTGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACa                                                                                                                                                                                                                     <  2:1297805/218‑1 (MQ=255)
                                                                                                                                    aTGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAattccattcc                                                                                                                                               >  2:1879294/1‑288 (MQ=255)
                                                                                                                                     tGGTAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAAttccattcca                                                                                                                                              >  1:1785736/1‑288 (MQ=255)
                                                                                                                                        tAAGACGCGGCTTCTGACTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATcc                                                                                                                                           <  2:585024/288‑1 (MQ=255)
                                                                                                                                                ggcttctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTgg                                                                                                                                  >  1:752790/10‑289 (MQ=255)
                                                                                                                                                ggcttctgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTgg                                                                                                                                  >  1:683226/10‑289 (MQ=255)
                                                                                                                                                 gcttctgactcCAGTAAGGCCATGCGTTCCACTTTACCTTCGGCATAAACCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATCACCAAACGACAGAGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCAAACACCGAGGCACAGAGCACCATCAACCAAGTTATCGTCCAACCCCACCCCCGCAGACAGCGCTATCCCTGCGCGGCTCAGCACCACCAATTCCACTCCAACCCTCCCCtcga                                                                                                                                 >  2:1564874/9‑286 (MQ=255)
                                                                                                                                                      tgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGac                                                                                                                             >  2:698222/4‑288 (MQ=255)
                                                                                                                                                      cgactcCAGTAAGGCCATGCGGTCCACTTTACCTTCAGCATAAAGCTGACGAATACGCACTTTTTCTTTATTTGGCAACCCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGaca                                                                                                                            <  1:629700/286‑1 (MQ=255)
                                                                                                                                                          tcCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCAt                                                                                                                        <  1:12881/289‑1 (MQ=255)
                                                                                                                                                            cAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCGGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATc                                                                                                                       >  2:90759/1‑288 (MQ=255)
                                                                                                                                                                aaGGCGATGCTGTCCGCCTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTAGGCAACCCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATcacac                                                                                                                   <  2:1689682/288‑1 (MQ=255)
                                                                                                                                                                 aGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACAt                                                                                                                 <  1:1640447/289‑1 (MQ=255)
                                                                                                                                                                      aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCACCCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCCGGGGTACACCATcccaccaccccg                                                                                                            >  2:1042515/1‑282 (MQ=255)
                                                                                                                                                                      aTGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACAACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCg                                                                                                            >  1:565478/1‑289 (MQ=255)
                                                                                                                                                                       tGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCaaa                                                                                                                                                                                                                       >  1:1053734/1‑181 (MQ=255)
                                                                                                                                                                           gTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGcccc                                                                                                                                     <  2:1226304/259‑1 (MQ=255)
                                                                                                                                                                            tCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCCTCAAACATGTTATGGGACAGCCCCACCGCCGCAGCCATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCAACCTGCCCCTGGGTGACACCATCACACCTCCGCGGAacc                                                                                                       >  2:863201/1‑287 (MQ=255)
                                                                                                                                                                            tCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAaca                                                                                                       <  1:1086159/288‑1 (MQ=255)
                                                                                                                                                                             ccACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATcc                                                                                                                                           >  2:786896/1‑251 (MQ=255)
                                                                                                                                                                              cACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACAcc                                                                                                     >  1:647474/1‑288 (MQ=255)
                                                                                                                                                                              cACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGATATCACTTCGCGGCTTAGCAGCGACCATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACAcc                                                                                                     >  1:1473918/1‑288 (MQ=255)
                                                                                                                                                                                cTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACAccgcc                                                                                                  <  1:1318260/289‑1 (MQ=255)
                                                                                                                                                                                cTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACAccgcc                                                                                                  <  2:1591202/289‑1 (MQ=255)
                                                                                                                                                                                cTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACAccgcc                                                                                                  <  2:170920/289‑1 (MQ=255)
                                                                                                                                                                                 ttacccTTCAGCATAAAGCTACCTAATACGCCCTTTTTCTTTATTTGCCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAGCACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACAccgccc                                                                                                 <  2:311528/285‑1 (MQ=255)
                                                                                                                                                                                     ccTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCaa                                                                                             <  1:440643/289‑1 (MQ=255)
                                                                                                                                                                                      cTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCaa                                                                                             >  1:212279/1‑288 (MQ=255)
                                                                                                                                                                                      cTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAAc                                                                                            <  2:392356/289‑1 (MQ=255)
                                                                                                                                                                                         cGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACACCGCCGGAACCCCCCCCGCAAcccg                                                                                         >  2:190560/1‑287 (MQ=255)
                                                                                                                                                                                          ggCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTg                                                                                         >  1:871901/1‑288 (MQ=255)
                                                                                                                                                                                           gCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAg                                                                                                                                                                                                                                         <  1:608087/143‑1 (MQ=255)
                                                                                                                                                                                                    tGGGGAATACGCACTTTTTCTTTAGTGGGCAAACCGATTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGAAAACACCGAGGAACAGAGCACCATCAAACATGTTATGGGAAAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCACCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCAt                                                                              <  2:785170/289‑1 (MQ=255)
                                                                                                                                                                                                    tGGCGCATCCCCACTTTTTCTTTATTTGGCCAACCGCTTGCCATCGGACCAGACGG‑CACAAACCCCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCAt                                                                              <  2:683226/289‑1 (MQ=255)
                                                                                                                                                                                                     ggCGAATACGCACTTTTTCTTTAGTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCAt                                                                              <  2:1408225/288‑1 (MQ=255)
                                                                                                                                                                                                             cGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGaca                                                                                                                            >  1:341254/1‑234 (MQ=255)
                                                                                                                                                                                                             cGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGaca                                                                                                                            <  2:341254/234‑1 (MQ=255)
                                                                                                                                                                                                                    tttCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTc                                                                            <  1:1849081/275‑1 (MQ=255)
                                                                                                                                                                                                                    tttCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAgg                                                                >  1:1194643/1‑287 (MQ=255)
                                                                                                                                                                                                                        tgtataTGGCAAACGGCTTGCCACCGGGCCAGACGGCCACAAACA‑CGCAAGCAAAAGGCCAAACGGCAGGGCTGCCATGGTCAG‑AATCGGGACAAGCTAGTCGCACACCCCGGGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGGCATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCGGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTa                                                          <  2:1683704/287‑1 (MQ=255)
                                                                                                                                                                                                                              tGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCCATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCCGCGTAACACCATCACACACCGCCGGGCCACCCCCCGCCACCTGACCAACCGCAATCGACTCATACAgccatcccttatc                                                     >  2:1849081/1‑276 (MQ=255)
                                                                                                                                                                                                                                  aaaCCGCTTGCCAACGGTCCAGACGG‑CGCAAACACCGAAGGAAAATGAGCAAACGACAGGGCCGACATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGAttt                                                <  2:1734720/289‑1 (MQ=255)
                                                                                                                                                                                                                                      cGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGCCAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCCACCGCATTCGCTTCCTGCTGGGCTTTACGAATGATTTCggg                                            >  2:1431069/1‑289 (MQ=255)
                                                                                                                                                                                                                                       gCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCTCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGa                                           <  1:264795/289‑1 (MQ=255)
                                                                                                                                                                                                                                          tGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAg                                        <  1:497651/289‑1 (MQ=255)
                                                                                                                                                                                                                                            ccgacGGTCCAGACGT‑CACAAACACCGCAGGCAAATGACCAAACGACCGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAgt                                       <  2:1076481/284‑1 (MQ=255)
                                                                                                                                                                                                                                                         cGG‑CACAAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTgg                         <  1:17559/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          ctgcccaAACACCGCAGGCAAATGACCAAACGACAAGGCTGCCATCGTCAG‑ACCCGTGACAATCGTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCt                           <  2:217565/282‑1 (MQ=255)
                                                                                                                                                                                                                                                              acaAACACCGCAGGCAAATGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCCGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGCTAGAGTGCATAAGGCTGGTgc                      >  2:670786/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                              aaTGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCAt           >  1:708989/1‑283 (MQ=255)
                                                                                                                                                                                                                                                                                tGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTtat   >  1:1805286/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                tGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTtat   >  1:318133/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                tGACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGGCGTtat   >  1:413355/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                 gACCAAACGACAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGCGACAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTtata  <  1:1879294/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
TGCGGCGGTCAAAGCATCGCGCAGCGGAGAATCCGGATGAACAAAAGAAGAGCCTGGCAACTGCATCCCCATAAACTCCACCACCATCTGGTTGGTGTTGGCAGTACCGTAGAAAGTACATGTTCCCGGCGCATGGTAAGACGCGGCTTCACTCTCCAGTAAGGCCATGCGGTCCACTTTACCTTCGGCATAAAGCTGGCGAATACGCACTTTTTCTTTATTTGGCAAACCGCTTGCCATCGGTCCAGACGG‑CACAAACACCGCAGGCAAATGACCAAAGCTCAGGGCTGCCATCGTCAG‑ACCCGGGACAATCTTGTCGCACACACCGAGGAACAGAGCACCATCAAACATGTTATGGGACAGCCCCACCGCCGCAGACATCGCTATCACTTCGCGGCTTAGCAGGCTCAATTCCATTCCATCCTGCCCCTGGGTGACACCATCACACATCGCCGGAACACCGCCCGCAACCTGACCAACCGCATTCGCTTCATGCAGGGCTTTACGAATGATTTCTGGATAGTGTTCATAAGGCTGGTGCGCGGAGAGCATGTCGTTATA  >  CP042583/1614544‑1615104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A