Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,541,713 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,541,7130GC98.5% 471.3 / NA 207intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/3);  new base C (130/73);  total (131/76)
Fisher's exact test for biased strand distribution p-value = 4.90e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,541,7140CG98.0% 457.7 / NA 207intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/2);  new base G (129/71);  total (131/76)
Fisher's exact test for biased strand distribution p-value = 6.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,541,7150TA99.0% 482.0 / NA 207intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (130/75);  minor base C (1/1);  total (131/76)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 207 total aligned reads displayed.

TGTGTACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCACTATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGGCTTTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGGC‑TCAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAAACTACAGAGCGGATAACTCCAGTTGCCAATAAAGGAAACCCGACTACTCCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGACTGAAAGCACCGACAACCATGCTGGCAAT  >  CP042583/1541440‑1541991
                                                                                                                                                                                                                                                                                  ||||                                                                                                                                                                                                                                                                                    
  tgtACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCCTCTATACTCCGCATGACTTTCTCGTCTTCCTGATACCGTCCGCGCGCTTCCAGCCAGCGCGGGGATTCATGAACGGAGCGCCAGGCCGTCCCCGTAGCGATAGGAC‑ACAATATTGCAGAGAt                                                                                                                                                                                                                                                                       >  2:568550/1‑289 (MQ=255)
  tgtACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGC‑AAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCCCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATCAGCG‑ACAATATTGCAGGGATa                                                                                                                                                                                                                                                                      >  1:1618556/1‑289 (MQ=255)
    tACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATa                                                                                                                                                                                                                                                                      >  2:1142680/1‑288 (MQ=255)
    tACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATa                                                                                                                                                                                                                                                                      <  1:1142680/288‑1 (MQ=255)
        taacaACGTTCATGGCAATCAGCACACAAGGGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAg                                                                                                                                                                                                                                                                 <  2:63367/287‑1 (MQ=255)
         cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCGGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCCGCGCCGTAGCGATAAGCG‑CCAATCTTGCAGGGATAAGCAGt                                                                                                                                                                                                                                                                >  2:1033136/1‑289 (MQ=255)
         cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAggg                                                                                                                                                                                                                                                                         >  2:1321133/1‑280 (MQ=255)
         cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAggg                                                                                                                                                                                                                                                                         <  1:1321133/280‑1 (MQ=255)
         cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGt                                                                                                                                                                                                                                                                >  1:1440469/1‑289 (MQ=255)
                 tCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTAccc                                                                                                                                                                                                                                                         <  1:1338487/288‑1 (MQ=255)
                 tCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCCCGATTCCAGCCAGCCCGGGGATTCAGGAAAGTAGCGCCAGGCACGCGCCGTAGCGTACAGCG‑ACAAAATTGCAGGGAGAACACGTTGTActc                                                                                                                                                                                                                                                         >  2:1175295/1‑286 (MQ=255)
                  cagggaactaggCACAAAGGAGCCTAATATCCCGCGTTTCATTATTCCTCC‑GTCAGGTAGGGCGGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACCCCGCATGCCTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGGAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGc                                                                                                                                                                                                                                                       <  2:434465/278‑1 (MQ=255)
                          tCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCCCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCCATTTGACCCGCCAGTTcc                                                                                                                                                                                                                                                >  2:1378778/1‑288 (MQ=255)
                                        ccTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCAAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAGGCAGATGGACCCGCAAGTTCCACTCTCCACTAATCa                                                                                                                                                                                                                                 >  2:275096/1‑289 (MQ=255)
                                         cTAATATCACTCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAg                                                                                                                                                                                                                                <  1:1403894/289‑1 (MQ=255)
                                           aaTATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAgcg                                                                                                                                                                                                                              >  2:1343429/1‑289 (MQ=255)
                                             tatCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAGGCG‑ACACTATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAgcggc                                                                                                                                                                                                                            >  2:713180/1‑289 (MQ=255)
                                               accgccgTTTCAGTAATTCTCCTGTCA‑GAAAGGCTGAATACGGCACCTCTTGTGGCGCTTTCCCGTAACCAGCAATAACCACAGGCGGCAAAGGTTTCCCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGCCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGt                                                                                                                                                                                                                          <  2:608943/284‑1 (MQ=255)
                                                       ttCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATaa                                                                                                                                                                                                                                                                     >  2:933715/1‑238 (MQ=255)
                                                       ttCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTccc                                                                                                                                                                                                                   >  2:1451625/1‑288 (MQ=255)
                                                       ttCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTccc                                                                                                                                                                                                                   >  2:1564538/1‑288 (MQ=255)
                                                       ttCAGTAATACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCa                                                                                                                                                                                                                  >  1:208825/1‑289 (MQ=255)
                                                             aaTTCTCGTGTCA‑GTAAGGCGGAATACGGCACCGCTTGTGGCGCTTTACCTTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGAATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCAAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTa                                                                                                                                                                                                            <  1:568550/289‑1 (MQ=255)
                                                             aaTACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGc                                                                                                                                                                                                              <  1:1458212/287‑1 (MQ=255)
                                                             aaTACTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTa                                                                                                                                                                                                            <  1:597950/289‑1 (MQ=255)
                                                             aaTACTCCTGTAA‑GTAGGGCTGACAACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCCCAGGCGGCAAAGGTTTACCCGTCGGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGc                                                                                                                                                                                                              <  2:860088/287‑1 (MQ=255)
                                                                 cTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAg                                                                                                                                                                                                                                                                    >  1:1750010/1‑229 (MQ=255)
                                                                 cTCCTGTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAg                                                                                                                                                                                                                                                                    <  2:1750010/229‑1 (MQ=255)
                                                                     tGTCA‑TTAAGGCTGACTACGGCCCCGCTGTTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGAAAAGGTTTACCCGTCTGGCGAATGACGCTTTCTTCTATCCTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCGGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCaatgaa                                                                                                                                                                                                    <  2:77468/289‑5 (MQ=255)
                                                                      gTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCaatgaac                                                                                                                                                                                                   >  2:1095310/1‑284 (MQ=255)
                                                                      gTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCaatgaac                                                                                                                                                                                                   >  1:624862/1‑284 (MQ=255)
                                                                      gTCA‑GTAAGGCTGAATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTATATACTCCGCATGACTTTCTCGGCTTCCTGATAACGTCAGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAAAATTGCAGGGATAAGCAGGTGTACCCGCCAGTTCCACTCTGCACTAATAAGCGGCGTGAGTCCCATCGTTATCaatgaac                                                                                                                                                                                                   >  1:1068289/1‑284 (MQ=255)
                                                                            taaggctgaataCGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGc                                                                                                                                                                                              >  2:1074854/10‑289 (MQ=255)
                                                                             aaggctgaataCGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACagag                                                                                                                                                                                               <  1:578587/279‑1 (MQ=255)
                                                                                     ataCGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATatgac                                                                                                                                                                                     <  1:1485612/289‑5 (MQ=255)
                                                                                          gCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTg                                                                                                                                                                                                                                                                              >  1:703906/1‑195 (MQ=255)
                                                                                                tttGTGGAGTTTACCCGTCACCAGCAATACCCCCGGGGGGCAAAGGTTTCCCCGTCTGCGGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCATGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCaa                                                                                                                                                                           <  2:1624128/287‑1 (MQ=255)
                                                                                                cTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGGGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGAAGGGATAAGCAGTGGTACCCGCAAGTTCCACTCTGAACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGACAAt                                                                                                                                                                          >  1:1734401/1‑289 (MQ=255)
                                                                                                cTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAAt                                                                                                                                                                          >  1:1085731/1‑289 (MQ=255)
                                                                                                   gtgGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACCCTGCACTAATCAGCGGCGGGAGTCCCATCGCTATCAATGAACAGAGCGGATATGAACAGTTCCCCATaaa                                                                                                                                                                       >  2:553410/1‑289 (MQ=255)
                                                                                                         cTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGaaa                                                                                                                                                                  >  1:968124/1‑288 (MQ=255)
                                                                                                         cTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGaaa                                                                                                                                                                  >  1:594154/1‑288 (MQ=255)
                                                                                                         cTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGCTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGTaaa                                                                                                                                                                  >  2:1483854/1‑288 (MQ=255)
                                                                                                               cGTCATCAGCAATAACCACAGGCGGCAAAGTTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGact                                                                                                                                                           <  1:321476/289‑1 (MQ=255)
                                                                                                                ttcgtcaGCAGTACCCGCCGGCCGCAACGTTTTCCCCTTCGGGCCTATGACGCCTTCTTCCATCCTCCGCATACCTTTCTCGGCTTCCTGATCCCGTCCGCGCGATCCCAGCCAGCGCGGGGATTCACGAAAGTAGCGCCAGGCCAGCGCCATAGCGATAATCG‑ACAATATTGCAGGCATAAGCATTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGactt                                                                                                                                                          <  2:1734401/285‑2 (MQ=255)
                                                                                                                   atcaGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCa                                                                                                                                                                                                                                               <  1:1705101/201‑1 (MQ=255)
                                                                                                                   atcaGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCa                                                                                                                                                                                                                                               >  2:1705101/1‑201 (MQ=255)
                                                                                                                   atcaGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGacttga                                                                                                                                                        >  1:4265/1‑285 (MQ=255)
                                                                                                                     caGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTTTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGacttgacca                                                                                                                                                     <  1:938761/289‑7 (MQ=255)
                                                                                                                        cAATACCCACAGCCGGCAAAGGTTTCCCCGTTGGGCGTATGCCGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGCCCGCGCGATTCCAGCCAGCGCGGGGATTCAGAAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGt                                                                                                                                                  <  2:797253/289‑1 (MQ=255)
                                                                                                                           tAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCa                                                                                                                                                                                                                                                                            <  2:1462866/164‑1 (MQ=255)
                                                                                                                             caccagggcggcAAGGGTTTCCCCGGCTGGCTTATGCCGCCTTTTTCTATACCCCGCATGACTTGCTCGGCTTCCTGATCCCGCCCGCGCAATTCAAGCCAGCGCGGGGATTCAGGAAAGTAGCGCAAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCAc                                                                                                                                             <  2:1907905/283‑1 (MQ=255)
                                                                                                                                       gcAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                    <  1:1535589/288‑1 (MQ=255)
                                                                                                                                       gcAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                    <  1:1202104/288‑1 (MQ=255)
                                                                                                                                        cAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCg                                                                                                                                  >  1:1371825/1‑289 (MQ=255)
                                                                                                                                                                      tctttctgcaCTCCGAATGACTTTAGCGCTTTCCCGATCCCGTCAGGGCGCTTCCAGACAGCGAGGGGATTAAGTAAAGTAGCGCCAGGCCAGGGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGc                                                                                                    <  2:670009/280‑1 (MQ=255)
                                                                                                                                                                             ataCTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCa                                                                                             <  1:1095310/289‑1 (MQ=255)
                                                                                                                                                                                 tCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTaa                                                                                         >  1:1824957/1‑289 (MQ=255)
                                                                                                                                                                                   cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCaatgaa                                                                                                                                                                                                    <  1:914112/180‑5 (MQ=255)
                                                                                                                                                                                   cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCaatgaa                                                                                                                                                                                                    >  2:914112/1‑176 (MQ=255)
                                                                                                                                                                                   cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACagag                                                                                                                                                                                               <  1:610484/185‑1 (MQ=255)
                                                                                                                                                                                   cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACagag                                                                                                                                                                                               >  2:610484/1‑185 (MQ=255)
                                                                                                                                                                                   cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCCTGTTCCACGATTTCTACCGGGAATATATTCGGTGAAACATACAAACAGCCAAACCAGTaaa                                                                                        >  2:1399020/1‑288 (MQ=255)
                                                                                                                                                                                   cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCAACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTaaa                                                                                        >  1:1264052/1‑288 (MQ=255)
                                                                                                                                                                                   cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGATATCAATGAACAGAGCGGATATCACCAGTTCCCAATAAAGGAAACCCGACTTGACCACCTTCCCCAATTCCTCCCGGGCATATATTCGGTGAAACCAGCAAACAGCGCACCCAGTaac                                                                                        >  2:111022/1‑287 (MQ=255)
                                                                                                                                                                                     cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGac                                                                                                                                                            >  1:1075250/1‑218 (MQ=255)
                                                                                                                                                                                     cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTcc                                                                                                                                               <  2:1122560/231‑1 (MQ=255)
                                                                                                                                                                                     cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGc                                                                                      >  1:1505408/1‑288 (MQ=255)
                                                                                                                                                                                     cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGc                                                                                      >  1:1669545/1‑288 (MQ=255)
                                                                                                                                                                                     cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATAAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAACGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATCTATTAGGTGAAACCAGCAAACAGCTTAACCAGTAAAGc                                                                                      >  1:193259/1‑288 (MQ=255)
                                                                                                                                                                                       tgccTTTCTCGGCTTCCTGATACCCCCCGCGCGATTCCAGCCACCGCGCGGATTCAGGAAAGTAGCCCCAGCCCAGCGCCGTAGCGATAAGCA‑ACAATATTGCAGGGATAAGCAGTTGTCCCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTcc                                                                                   <  1:553410/286‑1 (MQ=255)
                                                                                                                                                                                       tgccTTGCTCGGCGTCCTGTTCCCGTCCGCGCGATTCCAGCCGGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTcc                                                                                   <  2:594154/286‑1 (MQ=255)
                                                                                                                                                                                                 ggCTTCCTGCTACCGCCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCACCGGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCTGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACt                                                                         <  1:773643/289‑1 (MQ=255)
                                                                                                                                                                                                    ttCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTccc                                                                      >  1:1891119/1‑289 (MQ=255)
                                                                                                                                                                                                    ttCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTcc                                                                       >  1:1385727/1‑288 (MQ=255)
                                                                                                                                                                                                        tGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATc                                                                   >  1:1470509/1‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGTGGAAACCAGCAAACACCGTACCCAGTAAAGCCCCCAGCCCAACTCACACCACAAAACg                                                           >  2:66186/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAACCAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                           >  2:691464/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTcc                                                                                   >  2:451812/10‑264 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTcc                                                                                   <  1:451812/255‑1 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                           >  1:1051451/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                           >  1:1018955/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACg                                                           >  2:151729/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCAAGCCCAACTCCCATCACAAAACg                                                           >  1:1591302/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCCCCCAGCCCAACTCCCATCACAAAACg                                                           >  2:1271437/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGGACAGCCCCCAGCCCAAACCCCATCACAAAACg                                                           >  2:237942/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCAAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAAGCAGCAAACAGCTTAACCAGTAAAGCTCCCAGCCCAACTCCCACCCCAAAACg                                                           >  2:418122/10‑288 (MQ=255)
                                                                                                                                                                                                                tccgcgcgattCCAGCCAGCGCGGGGAATCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCACCCCAACTCCAATCACaaaaag                                                           >  1:305928/10‑286 (MQ=255)
                                                                                                                                                                                                                  cgtgggattCCGGCCGGGGCGGGGCTCCAGGAAGGTGGCGCCAGGCCAGCGCAGAAGCGATAAGCA‑ACAATATTGCGGGGATAAGCAGTTATACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggca                                                        <  2:31951/282‑1 (MQ=255)
                                                                                                                                                                                                                  cgcgcaattCCAGCCGGCGCGGGTATTAAGGAAAGTGGGCCCAGGCCAGGCCCGTACCGATAAGCG‑AAATTATTGAAGGGTTAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCTACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggca                                                        <  1:772478/282‑1 (MQ=255)
                                                                                                                                                                                                                  ccggcgtgtCCAGCCAGGGGGGGGTTTAAGGAAAGTGTGGCCAGGCCAGCGCCGGAGGGATACGCG‑ACAATATTGCAGGGATAAGCAGTTGTCCCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACggca                                                        <  2:1085731/281‑1 (MQ=255)
                                                                                                                                                                                                                             agcgacgcgggggATTCAGGAAAGTGGCGCAGGGCAAGCGCCGTA‑CGGTAAGGCGACAATATGGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGa                                             <  2:1880321/280‑1 (MQ=255)
                                                                                                                                                                                                                                   cgcgGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCa                                                                                                                                                                                                                                               <  1:665269/89‑1 (MQ=255)
                                                                                                                                                                                                                                   cgcgGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTACAGGGATAAGCAGTTGTACCCGCCAGTTGCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAATTGACACGCAAGGCAACCCGACTTGATCACGTTCCACGATTTATACCGGTCAGATATTCGGTGGAACCAGCAAACAGAGTAACCAGTAACGCTAACACCCCAACCCTCATCACAAAACGGCACGGAATAAgacagtcca                                       >  2:1407970/1‑281 (MQ=255)
                                                                                                                                                                                                                                       gggATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAATGCTCCCAGCCCAACTCCCATCACAAAACGGCCAGCAATAAGGAAATCCagat                                    >  2:1890550/1‑288 (MQ=255)
                                                                                                                                                                                                                                              aGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCggtgag                            >  1:803659/1‑285 (MQ=255)
                                                                                                                                                                                                                                                     tAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCaatgaa                                                                                                                                                                                                    <  1:1155725/114‑5 (MQ=255)
                                                                                                                                                                                                                                                     tAGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATc                                         >  1:350270/1‑269 (MQ=255)
                                                                                                                                                                                                                                                      aGCGCCAGGCCAGCGCCGTAGCGATAAGCG‑ACAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCa                      <  1:843260/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gcggTAGCGAAAAGCA‑CCAATATTGCAGGGTTAAGCAGTTTGACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAACCAtcgagg      <  2:647137/286‑6 (MQ=255)
                                                                                                                                                                                                                                                                                  ||||                                                                                                                                                                                                                                                                                    
TGTGTACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCA‑GTAAGGCACTATACGGCACCGCTTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGGCTTTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCCAGCGCCGTAGCGATAAGGC‑TCAATATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAAACTACAGAGCGGATAACTCCAGTTGCCAATAAAGGAAACCCGACTACTCCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCCATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGACTGAAAGCACCGACAACCATGCTGGCAAT  >  CP042583/1541440‑1541991

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A