Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,541,713 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,541,7130GC98.1% 591.4 / NA 263intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (3/2);  new base C (155/103);  total (158/105)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,541,7140CG98.9% 597.7 / ‑5.4 263intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  major base G (155/102);  minor base A (1/2);  total (158/105)
Fisher's exact test for biased strand distribution p-value = 5.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,541,7150TA99.2% 611.8 / ‑5.7 263intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (158/102);  minor base G (0/2);  total (158/105)
Fisher's exact test for biased strand distribution p-value = 1.57e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 263 total aligned reads displayed.

ATTAGTGTGTACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCACTATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGGCTTTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGGCTCAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAAACTACAGAGCGGATAACTCCAGTTGCCAATAAAGGAAACCCGACTACTCCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGACTGAAAGCACCGACAACCATGCTGG  >  CP042583/1541435‑1541987
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                  
attatggtgtTCTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTg                                                                                                                                                                                                                                                                           <  2:871978/283‑1 (MQ=255)
  tAGGGTGTACGCTACAACGGCCATGCCAATCAGCACCCAAGAGCTTAAAAGAACGCTGTTAAGTAATACTCATGTCAGTAAGGCTGAATACGGCACGGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACGCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCa                                                                                                                                                                                                                                                                         <  2:2563759/289‑1 (MQ=255)
       tgtACTGAACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACAGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACAACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTTCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATGAAGGACAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGGCACAA‑GATTACAggaac                                                                                                                                                                                                                                                                    >  2:731707/1‑286 (MQ=255)
        ttaattgacaACGTTCATGGAAATCGCCAAACAAGGGCCTAACATCACGGGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCGCCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATa                                                                                                                                                                                                                                                                   <  2:47095/282‑1 (MQ=255)
         tACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTg                                                                                                                                                                                                                                                                           <  2:2333528/280‑1 (MQ=255)
         tACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATaa                                                                                                                                                                                                                                                                  >  1:1181556/1‑289 (MQ=255)
           cTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCC‑TCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCa                                                                                                                                                                                                                                                               >  1:814565/1‑289 (MQ=255)
              cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TCTTGCAGGGATAAGCAGt                                                                                                                                                                                                                                                             >  1:1504640/1‑289 (MQ=255)
              cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGt                                                                                                                                                                                                                                                             >  2:1386780/1‑289 (MQ=255)
              cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGt                                                                                                                                                                                                                                                             >  1:1835534/1‑289 (MQ=255)
              cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGt                                                                                                                                                                                                                                                             >  1:2689724/1‑289 (MQ=255)
              cacaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGt                                                                                                                                                                                                                                                             >  2:838774/1‑289 (MQ=255)
              cacaACGTTCATGGCAATAAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTAGGCTTCCTGATACCGTCCGCGCGATTCCAGCCCGCGCGGGGATTCAGGAAAGTAGGGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGcctg                                                                                                                                                                                                                                                             >  1:1881933/1‑286 (MQ=255)
               acaACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATCCCAGCCAGCGCGGGGATTCAGGAAGGTAGCGCCAGGCC‑AGCGCCGTAGCCAGA‑AGCGACAA‑TATTGCatgtagaggcgagt                                                                                                                                                                                                                                                            >  2:1569255/1‑276 (MQ=255)
                  aCGTTCAGGGCAATCACCAAACAAGAGCCTAAGAGAACGGTTTTCAGTAATCCTCCTGTAAGTAAGGCTGAAAACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCCCAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTa                                                                                                                                                                                                                                                         <  2:2726133/289‑1 (MQ=255)
                   cGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAg                                                                                                                                                                                                                                                              <  1:1454306/283‑1 (MQ=255)
                   cGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAg                                                                                                                                                                                                                                                              >  2:1454306/1‑283 (MQ=255)
                        aTGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGcc                                                                                                                                                                                                                                                   >  1:1105730/1‑289 (MQ=255)
                             aaTCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGtt                                                                                                                                                                                                                                               <  1:1224847/288‑1 (MQ=255)
                                    acacaAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCCCAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTCGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCATTTGTACCCGCCAGTTCCAct                                                                                                                                                                                                                                          <  1:1670304/286‑1 (MQ=255)
                                    acacaAGAGCCTAATACCACGCGTTTCACTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTTTGGCGCTTTACCGTCATCAGCAATAACCCCAGGCGGCAACGGTTTCCCCGTCTGCCGTATGACGCCTTCTTTTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGGACCCGCCAGTTCCAct                                                                                                                                                                                                                                          <  1:1966618/286‑1 (MQ=255)
                                          gagCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCCCTa                                                                                                                                                                                                                                  >  1:2603628/1‑288 (MQ=255)
                                           agCCTAATATCACGCGTTGAAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAACCATCACCACAGGCGGCAAAGGTTGACCAGTCTTGCGTATGACGCCTTCTTCTATACTCCGCATGACCTTCTCGCCTTCCTGATACCTTCCGCGCTATTGCAGCCAGCGAGGGGATTCAGGAAAGTATCGCCAGGCC‑AGCGCCGTATCGATACAAGAAC‑A‑TATTTCAGGGACAACCAGTTGTACTCGCCAGTTCCCCCCAGCCCTAAt                                                                                                                                                                                                                                >  2:59181/1‑289 (MQ=255)
                                             ccTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCa                                                                                                                                                                                                                              >  1:1862881/1‑289 (MQ=255)
                                             ccTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCa                                                                                                                                                                                                                              >  1:338394/1‑289 (MQ=255)
                                             ccTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATGCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCa                                                                                                                                                                                                                              >  1:544899/1‑289 (MQ=255)
                                                  tatCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGCTCACGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCCGTTGTACCCGCCAGTTCCACTCTGCACTAATCAgcggc                                                                                                                                                                                                                         >  2:98195/1‑289 (MQ=255)
                                                       cgcgTTTCAGTAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAg                                                                                                                                                                                                                    >  1:1798836/1‑289 (MQ=255)
                                                                ttAATACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTCCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGc                                                                                                                                                                                                           <  1:1266082/288‑1 (MQ=255)
                                                                agaaTACCTCTGTCAGAAAGCCTAAATACGCAACCGT‑TTGTGGCCCTTTACCTTCAACCGAAATAACAACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCATTCTTCTATCCTCCGCATGACTTCCTCGGCTTCCTGCTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGc                                                                                                                                                                                                           <  2:358358/287‑1 (MQ=255)
                                                                  aaTACTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTa                                                                                                                                                                                                         <  1:921606/289‑1 (MQ=255)
                                                                      cTCCTGTCAGTAAGGCTGAATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCaa                                                                                                                                                                                                     >  2:1022621/1‑289 (MQ=255)
                                                                                taaggctgaataCGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCa                                                                                                                                                                                                                                     >  1:2267949/10‑247 (MQ=255)
                                                                                 aaggctgactaCGGCACCGCGTTGGGGC‑CTTTCCCGTCACCAGAAATACCCCCGGGCGGCAAAGGTTTACCCGTCGGGCGTTTGACGCCTTCTTCTATACTCCGAATGACTTTCTCGGCTTCCTGATACCGCCCGCGCGATTCCAGCAAGCGCGGGGATTCAGAAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACagag                                                                                                                                                                                            <  2:2426169/278‑1 (MQ=255)
                                                                                   ggctgaataCGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGa                                                                                                                                                                                        >  1:999526/7‑289 (MQ=255)
                                                                                        aataCGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACagag                                                                                                                                                                                            >  1:2177872/2‑280 (MQ=255)
                                                                                                  cGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTTCCa                                                                                                                                                                         >  1:49409/1‑289 (MQ=255)
                                                                                                              tttataggggaccggCAATAGCCACAGGCGGCAAAGGTTTCCCCGTCTGGCGTATGCCGCCTTCTTCTTTACTCCGCATGACTTTCTCGGCTTCCTATTACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTAAGGAAAGTGGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGaaa                                                                                                                                                               <  2:910153/274‑1 (MQ=255)
                                                                                                              cTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGc                                                                                                                                                                                                                                                    <  2:169909/203‑1 (MQ=255)
                                                                                                              cTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGc                                                                                                                                                                                                                                                    >  1:169909/1‑203 (MQ=255)
                                                                                                               tttCCCGTCATCAGAAATAACCACAGGCGGCAAAGTTTTACCCGTGTGGCGTATGACGCCTTCTTCTATACTCCGCATGTCTTTCTCGGCTTCCAGATACCGTCGGCGCGATTCCAGCCAGGGCGGGGATTCAGGAAAGTGGCGCCAGGCC‑AGCGCCGTAGCGATA‑GGCGACAA‑TATGGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAAc                                                                                                                                                              <  2:1798836/288‑1 (MQ=255)
                                                                                                                  aCCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCa                                                                                                                                                                                                                                                                         <  2:536296/178‑1 (MQ=255)
                                                                                                                         tcaGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGacttgac                                                                                                                                                    >  1:829015/1‑284 (MQ=255)
                                                                                                                           aGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGacttgaccac                                                                                                                                                 >  1:307517/1‑282 (MQ=255)
                                                                                                                                       aGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGacttga                                                                                                                                                     >  1:910153/1‑270 (MQ=255)
                                                                                                                                           ggcAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGCCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                 <  1:875960/289‑1 (MQ=255)
                                                                                                                                            gcAAAGGTTTCCCTGTCGGCCGTGTAGCCCGTTCTTCTATACCCCGAATGACTTTCTGGGCCTCCTGATACGGCCCGCGGGATTCGAGCCAGCGCGGGGATTAAGGAAAAGAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGAAAA‑TATTGCAGGGATAAGCGGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                 <  2:2278155/288‑1 (MQ=255)
                                                                                                                                            gcAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCGGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTAACCACGTTCCACGATTTCTAcc                                                                                                                                >  1:561738/1‑289 (MQ=255)
                                                                                                                                            acAAAGTTTTACCCGTTGGGCTTATCACGCGTTCTTCTATCCTCCGCATGCCTTTTTCGGCTTCCGGATACCTGCCGGGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                 <  2:2214314/287‑1 (MQ=255)
                                                                                                                                                            cTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTg                                                                                                                >  1:1911253/1‑289 (MQ=255)
                                                                                                                                                             tgccGTCTGACGCCTTCACTCATCCCCCGCATGACTTTCTCGGCTCCCGGATCCCGCCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTGGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGa                                                                                                               <  1:1603395/286‑1 (MQ=255)
                                                                                                                                                             tGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGa                                                                                                               <  1:2550018/289‑1 (MQ=255)
                                                                                                                                                                     gACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCa                                                                                                       >  2:2102441/1‑289 (MQ=255)
                                                                                                                                                                            tcttctATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCAt                                                                                                                                                                                                              >  1:683484/1‑179 (MQ=255)
                                                                                                                                                                            tcttctATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCAt                                                                                                                                                                                                              <  2:683484/179‑1 (MQ=255)
                                                                                                                                                                             cttctATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGt                                                                                               <  1:10585/289‑1 (MQ=255)
                                                                                                                                                                                   taCTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                 >  2:386940/1‑249 (MQ=255)
                                                                                                                                                                                      tCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCAct                                                                                                                                                                                                                                          >  2:2689317/1‑141 (MQ=255)
                                                                                                                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCa                                                                                                                                                                                                      >  1:2683760/1‑175 (MQ=255)
                                                                                                                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACagag                                                                                                                                                                                            <  1:4071/185‑1 (MQ=255)
                                                                                                                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACagag                                                                                                                                                                                            >  2:4071/1‑185 (MQ=255)
                                                                                                                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCaa                                                                                                      >  1:2285957/1‑271 (MQ=255)
                                                                                                                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAAc                                                                                            <  1:718151/281‑1 (MQ=255)
                                                                                                                                                                                        cGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTaaa                                                                                     >  1:591325/1‑288 (MQ=255)
                                                                                                                                                                                          cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGc                                                                                                                                                                                                           >  1:787650/1‑168 (MQ=255)
                                                                                                                                                                                          cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGc                                                                                                                                                                                                           <  2:787650/168‑1 (MQ=255)
                                                                                                                                                                                          cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGc                                                                                   >  1:1872313/1‑288 (MQ=255)
                                                                                                                                                                                          cATGACTTTCTCGGCTTCCTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGc                                                                                   >  1:2416271/1‑288 (MQ=255)
                                                                                                                                                                                                           ccggtcaCCGGCCGCGCGATTCCAGCCAGGGGGGGGATCAAGGAAAGTGACGCCGGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCCGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑At                                                                <  2:1261659/283‑1 (MQ=255)
                                                                                                                                                                                                           ccTGATACCGTCCGCGCGATTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCaa                                                                                                      >  2:117836/1‑252 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTcc                                                                                                                                            <  1:371932/195‑1 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                 <  1:249556/206‑1 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAc                                                                                                                                 >  2:249556/10‑215 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCatata                                                                                                                       >  1:2062207/10‑225 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCa                                                                                                                           >  2:1891907/10‑221 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTTAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCCGCCCAATCCCC‑AACACAAACCg                                                       >  2:1832936/10‑288 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCCAACACCGGAACCAGTAAAACTCCCACCCACACTCCCAACCACaaaag                                                        >  2:2191439/10‑287 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACa                                                                                                   >  1:1382354/10‑245 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCa                                                                         <  1:1168426/262‑1 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACg                                                       >  1:2224337/10‑288 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACg                                                       >  2:1924369/10‑288 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACg                                                       >  1:1937085/10‑288 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATAATCGGTGAAACCAGCAAACCGCGTAACCAGTAAAGCCCCCAGCCCAACTCAC‑ATCACAAAACg                                                       >  2:551925/10‑288 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCACAGATTTCTACCGGGCATATAATCGGTGAAACCAGCAAACAGCGTAAc                                                                                            >  2:1329309/10‑252 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTCCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTCCCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACg                                                       >  1:1411826/10‑288 (MQ=255)
                                                                                                                                                                                                                     tccgcgcgattCCAGCAAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTAACGGGCATATATTCGGTGCAACCAGCAAACAGCGGAACCAGTAAAGCTCCCAGCCCACATCCC‑ATCACAAAACg                                                       >  1:952480/10‑288 (MQ=255)
                                                                                                                                                                                                                      cggagagattCCAGCGAGGGCGGAGATTCAGACAAGGGGCG‑CAGGCCAAGCGCCGTAGATATA‑AGCAACAA‑TATTGCAGGGATAAGCAGTTTTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACggc                                                     <  2:1116874/281‑1 (MQ=255)
                                                                                                                                                                                                                                 cagccagcGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAgg                                          <  1:1626150/289‑1 (MQ=255)
                                                                                                                                                                                                                                        cgcgGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAGGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCa                                   >  1:1292209/1‑289 (MQ=255)
                                                                                                                                                                                                                                        cgcgGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGat                                                                                                                                                         >  2:297266/1‑171 (MQ=255)
                                                                                                                                                                                                                                        cgcgGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCa                                   >  1:283429/1‑289 (MQ=255)
                                                                                                                                                                                                                                        cgcgGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCa                                   >  1:2157326/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       aaGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTa                                                                                              >  2:2272065/1‑216 (MQ=255)
                                                                                                                                                                                                                                                          tAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATAAATTCGGTGAAACCAGCAAACAGCGTACCCAGTAAAGCTCCCAGCACAACTACC‑ATCACAACACGGCAGGCAATAAGGAAAGCCATATTCggtgagaaatccc                 >  2:2672987/1‑278 (MQ=255)
                                                                                                                                                                                                                                                             cgcCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACggc                                                     <  2:225568/250‑1 (MQ=255)
                                                                                                                                                                                                                                                             cgcCAGGCC‑AGCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACggc                                                     >  1:225568/1‑250 (MQ=255)
                                                                                                                                                                                                                                                              gccaggcc‑agCCCCGTAGC‑ATA‑AGGCGAAATTATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGAc             <  1:2097770/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                caggcc‑agCGCCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACaa           >  2:926534/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          gcCGTAGCGATA‑AGCGACAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGACCAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAACCAtcga    <  1:2374406/287‑4 (MQ=255)
                                                                                                                                                                                                                                                                          gcCGAAGCGATA‑AGCAGAAA‑TATTGCAGGGATACGCAGTTGCACCCGCCAGTTCCACTCTGCACTAATCAGCGTCGTGAGTCCCATCGCTATCAATGAACAGAGCGGATATGAACAGTTGCCAATAAAGGAAACCCGACTTGACCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGTGAGAAAGCACCGACAACCAtcgagg  <  1:1761233/289‑6 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                  
ATTAGTGTGTACTGCACAACGTTCATGGCAATCAGCACACAAGAGCCTAATATCACGCGTTTCAGTAATACTCCTGTCAGTAAGGCACTATACGGCACCGC‑TTGTGGCGCTTTACCGTCATCAGCAATAACCACAGGCGGCAAAGGTTTACCCGTCTGGCGTATGACGCCTTCTTCTATACTCCGCATGACTTTCTCGGCTTCCTGATACCGTCCGCGGCTTTCCAGCCAGCGCGGGGATTCAGGAAAGTAGCGCCAGGCC‑AGCGCCGTAGCGATA‑AGGCTCAA‑TATTGCAGGGATAAGCAGTTGTACCCGCCAGTTCCACTCTGCACTAATCAGCGGCGTGAGTCCCATCGCTATCAAACTACAGAGCGGATAACTCCAGTTGCCAATAAAGGAAACCCGACTACTCCACGTTCCACGATTTCTACCGGGCATATATTCGGTGAAACCAGCAAACAGCGTAACCAGTAAAGCTCCCAGCCCAACTCCC‑ATCACAAAACGGCAGGCAATAAGGAAATCCATATTCGGACTGAAAGCACCGACAACCATGCTGG  >  CP042583/1541435‑1541987

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A