Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,637,228 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,637,2280AT99.6% 658.6 / NA 275intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (147/127);  minor base C (0/1);  total (147/128)
Fisher's exact test for biased strand distribution p-value = 4.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,637,2290CG99.6% 642.0 / NA 275intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (146/127);  total (147/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,637,2300TA99.6% 652.6 / NA 275intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (146/127);  minor base G (0/1);  total (147/128)
Fisher's exact test for biased strand distribution p-value = 4.67e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 277 total aligned reads displayed.

CGGCGCGATCCAGGTGGCATTATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTACTATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCGCTTGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCTCACCATCGGATGCTGAATACGCGCCGTG  >  CP042583/1636949‑1637513
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                           
   cgcgATCCAGGTGGCATTATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACTGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGTGGTCTGCTGTTCATACACCTCTACAGAACCGACGCCATGCGGCATGACCACCCGCGCTG‑CCCCGCTTCAATAATctca                                                                                                                                                                                                                                                                                    >  2:707068/1‑285 (MQ=255)
   cgcgATCCAGGTGGCATTATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATcgcc                                                                                                                                                                                                                                                                                    >  2:1794949/1‑288 (MQ=255)
   cgcgATCCAGGTGGCATTATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATcgcc                                                                                                                                                                                                                                                                                    >  1:621545/1‑288 (MQ=255)
       aTCCAGGTGGCATTATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTAt                                                                                                                                                                                                                                                                               >  2:573671/1‑289 (MQ=255)
       aTCCAGGTGGCATTATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTAt                                                                                                                                                                                                                                                                               >  1:638649/1‑289 (MQ=255)
                 cagtATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCCCTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAAt                                                                                                                                                                                                                                                                      <  1:558965/285‑1 (MQ=255)
                          cAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAAccgcccgc                                                                                                                                                                                                                                                            <  1:11551/289‑1 (MQ=255)
                          cAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAAccgcccgc                                                                                                                                                                                                                                                            <  2:283656/289‑1 (MQ=255)
                             aGAATTGGATCGTTTCGGAGCGGATAGGATCAATGGCACTCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCCTGCTCATCGGTAGTGCTCCAGGCAATTTTTAAGGTATTCAGCGGCTTCATTCCCCACAGCACCACAACCTGGCTGTTGTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAg                                                                                                                                                                                                                                                         <  2:638113/289‑1 (MQ=255)
                             aGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAg                                                                                                                                                                                                                                                         <  2:894247/289‑1 (MQ=255)
                             aGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAg                                                                                                                                                                                                                                                         <  1:1386380/289‑1 (MQ=255)
                                aTTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGt                                                                                                                                                                                                                                                       <  1:1637271/288‑1 (MQ=255)
                                         tttCGGAGCGGTTAGGATCAATGGTCTTCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTACAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTCTCCAGAAACAGCGGCCAGGAGGTCTGCTGTCCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCG‑CGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACg                                                                                                                                                                                                                                             <  2:1059462/288‑1 (MQ=255)
                                              gAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCCGCTGTTCATACACCTCTCCAGAACCGACCACATGCGGCATGTTCACCGGTTCTG‑CCCCGGTTGAATATTCGCCGCTATTCCCGGAATCACCTGCCGCCAGGGTCATATAACGTTgac                                                                                                                                                                                                                                        >  2:203175/1‑287 (MQ=255)
                                                  ggATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTa                                                                                                                                                                                                                                     <  1:895286/288‑1 (MQ=255)
                                                   gATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGtt                                                                                                                                                                                                                                                      <  2:245129/270‑1 (MQ=255)
                                                         aTCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACcgcccgcc                                                                                                                                                                                                                                                           >  1:397344/1‑259 (MQ=255)
                                                         aTCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACcgcccgcc                                                                                                                                                                                                                                                           <  2:397344/259‑1 (MQ=255)
                                                              tGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGt                                                                                                                                                                                                                                                       >  1:1823615/1‑258 (MQ=255)
                                                                  aaTCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTTCCGTAAGGTTTGCGCTTTAtt                                                                                                                                                                                                                     >  2:1659320/1‑287 (MQ=255)
                                                                  aaTCACGTGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGc                                                                                                                                                                                                                    <  2:932998/289‑1 (MQ=255)
                                                                   aTCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCATGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCa                                                                                                                                                                                                                   >  1:982748/1‑289 (MQ=255)
                                                                    tCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCaa                                                                                                                                                                                                                  <  1:1132734/289‑1 (MQ=255)
                                                                                    ttttttCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAgcgc                                                                                                                                                                                                  <  1:573671/289‑1 (MQ=255)
                                                                                    ttttttCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAgcgc                                                                                                                                                                                                  <  1:1277807/289‑1 (MQ=255)
                                                                                     tttttCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGcc                                                                                                                                                                                                 <  1:1718942/289‑1 (MQ=255)
                                                                                                                   tGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAAccg                                                                                                                                                                                                                                                                 <  1:681994/195‑1 (MQ=255)
                                                                                                                   tGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGAGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGCTCATATAACGTTGCAGGACGGTTTGCGCTTTATGCAACACGACAGAAGTGCGCCAGCCGACAGATACGCCAAAAAGGgccgatg                                                                                                                                                                   >  2:1283979/1‑284 (MQ=255)
                                                                                                                    gCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGTATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGgccgaagg                                                                                                                                                                  >  1:672457/1‑283 (MQ=255)
                                                                                                                                  cTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGt                                                                                                                                                                                                                                      <  2:691042/207‑1 (MQ=255)
                                                                                                                                  cTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAAGGGCCGATGGTCCGTGAGCCTTAc                                                                                                                                                    >  2:1228515/1‑289 (MQ=255)
                                                                                                                                   tCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACg                                                                                                                                                   <  1:1659320/289‑1 (MQ=255)
                                                                                                                                     cAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGaa                                                                                                                                                 <  1:744790/289‑1 (MQ=255)
                                                                                                                                       ggCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAAc                                                                                                                                                                                                                                                                   >  2:1520880/1‑173 (MQ=255)
                                                                                                                                       ggCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAAc                                                                                                                                                                                                                                                                   <  1:1520880/173‑1 (MQ=255)
                                                                                                                                       ggCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCagaa                                                                                                                                                                                                        >  1:1261407/1‑232 (MQ=255)
                                                                                                                                       ggCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAAt                                                                                                                                                >  2:643897/1‑288 (MQ=255)
                                                                                                                                       ggCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTCCGCTTTATGCAACACGCCAGAAAAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGCCAGTTAGCATCACGaagc                                                                                                                                               >  2:814718/1‑287 (MQ=255)
                                                                                                                                        gCAATTTTTCAGGTATTCAGCGGGTTCATTCCCCCACGCCACACAACATGGCCGTTTTCCGGAATCCGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATa                                                                                                                                               <  2:1637691/288‑1 (MQ=255)
                                                                                                                                                             gggTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTGCCCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAAt                                                                                                                           <  1:827059/288‑1 (MQ=255)
                                                                                                                                                                  cATTCACCACCGCCCCACAGCCTGGCTGTTTTCCAGAATCAGCGGCCGGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGtttt                                                                                                                    <  2:506521/289‑1 (MQ=255)
                                                                                                                                                                    tcccccACAGACCCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTaa                                                                                                                  <  2:84043/287‑1 (MQ=255)
                                                                                                                                                                          acaGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATCTAACGTTGCAGTAAGGTTTGCGCTCTATGCAACACGCCAGAAGAGCGCCAGCCGAACGATCCGGCAAAAATGACCCACAGTCCGTTAGCTTTCCGAATACGATCATGTTGCGCATGTATCAGTTTTAAta                                                                                                                >  1:1815708/1‑284 (MQ=255)
                                                                                                                                                                            acaaccaaAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCGTTTCATACACCTATACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGtt                                                                                                          <  2:1024768/286‑1 (MQ=255)
                                                                                                                                                                             gCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCg                                                                                                                                                              <  1:705153/236‑1 (MQ=255)
                                                                                                                                                                             gCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGaa                                                                                                                                                 >  1:1176744/1‑249 (MQ=255)
                                                                                                                                                                                 cacaACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCa                                                                                                      >  1:304138/1‑288 (MQ=255)
                                                                                                                                                                                 cacaACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAg                                                                                                     <  1:406915/289‑1 (MQ=255)
                                                                                                                                                                                   caACCTGGCTGTTTTCCAGAATCAGCGGTCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACAACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCt                                                                                                   <  1:1541560/289‑1 (MQ=255)
                                                                                                                                                                                   caACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGCATAATCGCCGCTATGCCCGGCATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGCCAAAAATCGCCGATGGTCCTTTAGCTTTACGAATACGATCATGTTTCTCATCATCCAGTTTTAATGCCTGTTTCCaac                                                                                                    >  2:1144955/1‑286 (MQ=255)
                                                                                                                                                                                   caACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCTGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGATTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGACCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCaac                                                                                                    >  1:465114/1‑286 (MQ=255)
                                                                                                                                                                                   caACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCACACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCt                                                                                                   <  1:846782/289‑1 (MQ=255)
                                                                                                                                                                                      ccTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTc                                                                                                                                 >  1:1072350/1‑256 (MQ=255)
                                                                                                                                                                                      ccTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCa                                                                                                 >  2:136168/1‑288 (MQ=255)
                                                                                                                                                                                      ccTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCAc                                                                                                <  1:234793/289‑1 (MQ=255)
                                                                                                                                                                                      ccTGGCTGTTTTCCAGAAGCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTc                                                                                                                                 <  2:1072350/256‑1 (MQ=255)
                                                                                                                                                                                        tGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCt                                                                                              <  1:1473200/289‑1 (MQ=255)
                                                                                                                                                                                         ggCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCCAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATTCCTGTTCCCAGCTCa                                                                                                 >  1:735223/1‑285 (MQ=255)
                                                                                                                                                                                          gCTGGTTCCCAGACTCGGCGGCCCGGGGGTCTGCTGTTCATACACCTCTAAAGAACCGACCAAACGCGGCATGATACCCTGTGCTG‑CCCCGGTTGAAGAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATTCCTGTTCCCAGCTCACCTg                                                                                             <  2:735223/288‑1 (MQ=255)
                                                                                                                                                                                           cTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACCCGCCAGAAGAGCTCCAGCCGTACGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCCGTTTTAATGCCTGTTCCCAGCTCACCTGt                                                                                            >  1:933766/1‑288 (MQ=255)
                                                                                                                                                                                            tGTTTTCCAGAACCAGCGGCCAGGAGGTCTGCTGTTCATCCACCCCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTa                                                                                           <  2:792884/288‑1 (MQ=255)
                                                                                                                                                                                             gTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCTCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACa                                                                                         <  1:759287/289‑1 (MQ=255)
                                                                                                                                                                                                ttCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAAt                                                                                                                           >  1:415014/1‑252 (MQ=255)
                                                                                                                                                                                                ttCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAg                                                                                      <  2:595318/289‑1 (MQ=255)
                                                                                                                                                                                                ttCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGAAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAg                                                                                      <  1:1688224/289‑1 (MQ=255)
                                                                                                                                                                                                        tCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTCCGAATACGATCATGTTGCCCATGAATCAGTTTTAATGCCTGTTCCCCGCTCACCTGTACATAGGTATCtt                                                                               >  2:1819557/1‑288 (MQ=255)
                                                                                                                                                                                                                          gctgTTCATACACCTCTACAGAACCGACCACATGCGGCATGCTCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCgg                                                            <  1:253789/289‑1 (MQ=255)
                                                                                                                                                                                                                               tCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCa                                                       <  1:1794949/289‑1 (MQ=255)
                                                                                                                                                                                                                                cATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATc                                                                                                                          >  2:1253666/1‑221 (MQ=255)
                                                                                                                                                                                                                                cATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAg                                                      >  1:144168/1‑289 (MQ=255)
                                                                                                                                                                                                                                   caaccctgacgaaaCCGCCCACGTGCGGCATGATCCCCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTgg                                                   <  2:551677/277‑1 (MQ=255)
                                                                                                                                                                                                                                   acacCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTgg                                                   >  1:1045989/1‑289 (MQ=255)
                                                                                                                                                                                                                                       ctctACAGAACCGCCCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTa                                               <  1:347086/289‑1 (MQ=255)
                                                                                                                                                                                                                                        tctACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCt                                                                                              <  1:1099713/241‑1 (MQ=255)
                                                                                                                                                                                                                                        tctACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCt                                                                                              >  2:1099713/1‑241 (MQ=255)
                                                                                                                                                                                                                                        tctACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCgg                                                            <  2:1155299/275‑1 (MQ=255)
                                                                                                                                                                                                                                        tctACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTa                                               >  1:1199318/1‑288 (MQ=255)
                                                                                                                                                                                                                                        tctACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATAATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGTTTGCAGTGGATTa                                               >  1:193883/1‑288 (MQ=255)
                                                                                                                                                                                                                                          tACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGGCCGTTAGCTTTACGAATTCGATCATGTTGCTCATGAATCAGTTTTAATGCCTTCTCCCAGCTCACCTGTACATAGGTAGCTTCGCCACTACCTTTCGCCGGTTGCAGTGGATTAGCg                                            >  2:1859179/1‑289 (MQ=255)
                                                                                                                                                                                                                                               aaCCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCaga                                                                                                                                                                                                         <  2:623506/127‑1 (MQ=255)
                                                                                                                                                                                                                                               aaCCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGC‑AAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATa                                       >  1:1911374/1‑288 (MQ=255)
                                                                                                                                                                                                                                                 ccGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGTGTGCAGTGGATTCTAGAGGTa                                       >  2:1837915/1‑287 (MQ=255)
                                                                                                                                                                                                                                                 ccGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATa                                       >  1:1513172/1‑287 (MQ=255)
                                                                                                                                                                                                                                                    aCCACATGCGGCATGATCCCCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCCGGTTCATATAACGTTGCACTAATGTTTGCGCTTTATGCAACACGCCAGAAGAGCGACAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGCATACGTTCATGTTGCTCAGTAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACCTAGGTATCTTCGCCCCTACCTTTCCCCGTTTGCAGTGGTTTACCGAGATATCttt                                  >  2:832004/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    aCCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCaa                                                                                                                                                                               <  2:1344317/148‑1 (MQ=255)
                                                                                                                                                                                                                                                    aCCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCaa                                                                                                                                                                               >  1:1344317/1‑148 (MQ=255)
                                                                                                                                                                                                                                                    aCCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCt                                                                                                   <  1:1013867/224‑1 (MQ=255)
                                                                                                                                                                                                                                                    aCCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTCATGCAACACGCCAGAAGAGCGCCACCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACCAATACGATCAATTTGCCCCATAATCAGCTTTAATTCCTTGTCCCAGCTCACCTGTACCTAGGTATCTTCCCCACGACCCTTCCCCGGTTTCGATGGCTTTTCGTGATAGCttt                                  >  2:1084536/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cATGATCACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTACTGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCCCACCATc                       >  1:53585/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                     cACCTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCTCACCATCGGATGc                 <  1:1251236/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     cACCTGGGCGG‑CCCCTGTTGGATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTGCATATAACGTTGCAGTAAGGTTTTCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCTATGGTCCGTTAGCTTTACGAATACTATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCTCACCATCGGATGc                 <  2:427432/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCgg                                                            <  2:449751/244‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ccTGTGCTG‑CCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCgg                                                            >  1:449751/1‑244 (MQ=255)
                                                                                                                                                                                                                                                                           tgctg‑cCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCTCACCATCGGATGCTGAAt            >  1:1295131/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                           tgctg‑cACCGGTTGAATAATCGCCGCTATGCCCGGCCTAACCAACCGCCAGGTTCATATAACGTTGCAGTAAGGTTCGCGCTTTTTGTAACACGACAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGCATACGATCATGTTGCTCATGAATCCGTTTTCATGCCTGTTCCCCGCTCACCTGTACATAGGTACATTCGTCACGACCTGTCGCCGGTTGCCGTGGGTTCATGAGATAGCCTATTTCCACCACATGATGCTGAAt            >  2:1613724/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             ctg‑cCCCGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTATACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCTCACCATCGGATGCTGAATAc          >  2:1733935/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                 ccccGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATc                                                                                                                          >  2:366066/1‑173 (MQ=255)
                                                                                                                                                                                                                                                                                 ccccGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATc                                                                                                                          <  1:366066/173‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 ccccGGTTGAATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTtct                              <  1:809439/265‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     cgttgtatgATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCCGATGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCTCACCATCGGATGCTGAATACGCGCCgtg  <  2:1483172/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                           
CGGCGCGATCCAGGTGGCATTATCGTCAAAGAATTCGATGGTTTCGGAGCGGATAGGATCAATGGCAATCACTGGTTTGCCAGATTTTTTCAGCTGATGGAAGTATTCCAGCCCTTGCTCATCGGTACTGCTCCAGGCAATTTTTAAGGTATTCAGCGGGTTCATTCCCCACAGCACCACAACCTGGCTGTTTTCCAGAATCAGCGGCCAGGAGGTCTGCTGTTCATACACCTCTACAGAACCGACCACATGCGGCATGATCACCTGTGCTG‑CCCCGGTACTATAATCGCCGCTATGCCCGGAATAACCGCCCGCCAGGTTCATATAACGTTGCAGTAAGGTTTGCGCTTTATGCAACACGCCAGAAGAGCGCCAGCCGTAAGATCCGGCAAAAATGGCGCTTGGTCCGTTAGCTTTACGAATACGATCATGTTGCTCATGAATCAGTTTTAATGCCTGTTCCCAGCTCACCTGTACATAGGTATCTTCGCCACGACCTTTCGCCGGTTGCAGTGGATTATCGAGATAGCTTTTTCTCACCATCGGATGCTGAATACGCGCCGTG  >  CP042583/1636949‑1637513

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A