Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,975,305 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,975,3050AT100.0% 688.5 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (119/167);  total (119/167)
*CP0425831,975,3060CG100.0% 680.8 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (119/167);  total (119/167)
*CP0425831,975,3070TA99.7% 681.5 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (118/167);  minor base G (1/0);  total (119/167)
Fisher's exact test for biased strand distribution p-value = 4.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 286 total aligned reads displayed.

AAGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCACTTTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATACTGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGTGCCAT  >  CP042583/1975033‑1975586
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                       
aaGGCATCCGGTCAAAAACGGTTGCGAAGTTCGCCAATCACCGTGTCGTCAAGATGATCGCGGGTCTGCCGGGCGGGTTCTTGTTCGGTTAATTCGGTCATATTGTTAACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGgcgc                                                                                                                                                                                                                                                                           <  2:1703181/289‑1 (MQ=255)
aaGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGgcgc                                                                                                                                                                                                                                                                           <  1:660418/289‑1 (MQ=255)
      tCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATaa                                                                                                                                                                                                                                                                      >  2:111734/1‑288 (MQ=255)
            ccAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGccc                                                                                                                                                                                                                                                                <  1:1015221/288‑1 (MQ=255)
              aaaaCGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGa                                                                                                                                                                                                                                                             >  1:336270/1‑289 (MQ=255)
                     ttGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCa                                                                                                                                                                                                                                                       >  2:1648102/1‑288 (MQ=255)
                      tGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                      <  2:116692/288‑1 (MQ=255)
                        cgcAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCCCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCTTGACCCCCAacc                                                                                                                                                                                                                                                    >  2:672460/1‑288 (MQ=255)
                             ttCGCCAATCACCGCATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCa                                                                                                                                                                                                                                               <  2:691338/288‑1 (MQ=255)
                              tCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCAccc                                                                                                                                                                                                                                                <  1:222952/286‑1 (MQ=255)
                                   aaTCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGc                                                                                                                                                                                                                                        <  1:309559/289‑1 (MQ=255)
                                       aCCGGATCATCAAGAGGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAaccacc                                                                                                                                                                                                                                                 <  2:1748000/276‑1 (MQ=255)
                                           gATAATCAAGAGGATGGCGGGGCTGCCAGGGGGGTTCTGGGGCGGTTAAGTCGGTCATATTGTTCACAATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGAAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCTCCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGgacgac                                                                                                                                                                                                                                 <  2:768286/288‑1 (MQ=255)
                                              catcaAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCCCTGATTGCATATTGGCGCGATAAACCCCCTGATCGCCCACCACCCAGGAGAGCGGGCGCCGtt                                                                                                                                                                                                                              >  2:343559/1‑288 (MQ=255)
                                                tcaAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCtt                                                                                                                                                                                                                           >  2:179712/1‑289 (MQ=255)
                                                   aGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATAGTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCTCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTg                                                                                                                                                                                                                         >  1:811553/1‑288 (MQ=255)
                                                         ttgcgGGTCTGCCAGGCGGGTTCTGGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATa                                                                                                                                                                                                                   <  2:1513873/286‑1 (MQ=255)
                                                         tCGCGGGTCTGCCAGGCGTGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCCA‑ATGGTCCGTGGTTACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTTGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAg                                                                                                                                                                                                                  <  1:1682929/289‑1 (MQ=255)
                                                          cgcgGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAg                                                                                                                                                                                                                  <  2:320084/288‑1 (MQ=255)
                                                          cgcgGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAAAGCGGGCGACGTTCTTTGCCGATCGa                                                                                                                                                                                                                 >  2:1566105/1‑289 (MQ=255)
                                                           gcgGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGAt                                                                                                                                                                                                                <  1:382099/289‑1 (MQ=255)
                                                             gggTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGAtt                                                                                                                                                                                                               <  1:1233517/288‑1 (MQ=255)
                                                              ggTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGAtt                                                                                                                                                                                                               >  1:1812227/1‑287 (MQ=255)
                                                               gTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGAtt                                                                                                                                                                                                               >  1:614995/1‑286 (MQ=255)
                                                                   gCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCaa                                                                                                                                                                                                        <  1:126181/289‑1 (MQ=255)
                                                                          tggTTCTTGCGCGGTTAAGTCGGTCCGATTGTTCACCATTGCAA‑ATGGTCCGTGGTAACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGATTACGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTCCGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGAGCGATAACCGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  <  1:1737460/287‑1 (MQ=255)
                                                                          gggTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  <  1:986957/288‑1 (MQ=255)
                                                                          gggTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  <  1:863901/288‑1 (MQ=255)
                                                                              tCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAGATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGt                                                                                                                                                                                              >  1:573450/1‑288 (MQ=255)
                                                                              tCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCGGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTg                                                                                                                                                                                             <  1:1437407/289‑1 (MQ=255)
                                                                                ttGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGcc                                                                                                                                                                                           <  1:954458/289‑1 (MQ=255)
                                                                                ttGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGcc                                                                                                                                                                                           <  1:1391999/289‑1 (MQ=255)
                                                                                        ttAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                   <  1:707398/289‑1 (MQ=255)
                                                                                                gTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGc                                                                                                                                                                                        >  2:619124/1‑276 (MQ=255)
                                                                                                gTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGc                                                                                                                                                                                        <  1:619124/276‑1 (MQ=255)
                                                                                                  cATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  <  2:1605690/264‑1 (MQ=255)
                                                                                                  cATATTGTTCACAATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCCAATTAAATCTCGTCAGGTGTACGAAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCGCTGATTGCATATTGGCGCGAGCAACGCCCTGATCGCCAACCACCCAGGATAGCGGACGAGGTCCTTTGCCGAGAGAGTCAGTAAACGACACCAGTTCCTGCACGTACGCTCCacg                                                                                                                                                                          >  2:254813/1‑286 (MQ=255)
                                                                                                           cACCATTGCAC‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGgcgc                                                                                                                                                                                                                                                                           >  1:1472801/1‑182 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGTTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCggg                                                                                                                                                                <  1:145502/289‑1 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGgcgc                                                                                                                                                                                                                                                                           <  2:1472801/182‑1 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGCCGTTCTTTGCCGATAGCTTCCTGCAACCGCATCAGTGCCTGCATGTACGCTTCAggcccccgccg                                                                                                                                                                 >  2:1772460/1‑279 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTc                                                                                                                                                                                                              >  1:720137/1‑243 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGc                                                                                                                                                                                                          >  1:1627112/1‑247 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  <  2:1258114/255‑1 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCggg                                                                                                                                                                <  1:1030392/289‑1 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCggg                                                                                                                                                                <  1:239954/289‑1 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCggg                                                                                                                                                                <  1:1188522/289‑1 (MQ=255)
                                                                                                           cACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGAAGATCTTTGCCGATAGATTCCTGCGAAAGCATCAGt                                                                                                                                                                                              >  1:1656286/1‑259 (MQ=255)
                                                                                                           aaCCATTGCAAGATGG‑CCGTGGGGACTGTGGGGGCAGGAAGCTTCGAGAAATAGATTTAGGAATAAGCGAAGAAAAAGCCCGTGGCCGACAGGCACAAATTAGATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCGGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCggg                                                                                                                                                                <  2:1448538/288‑1 (MQ=255)
                                                                                                              cATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCa                                                                                                                                                              >  1:1242725/1‑288 (MQ=255)
                                                                                                               aTTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            <  1:1071413/289‑1 (MQ=255)
                                                                                                                   cAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCgg                                                                                                                                                        >  2:1191081/1‑289 (MQ=255)
                                                                                                                    aa‑aTGGTCCGTGGTGACTGGCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCggg                                                                                                                                                       <  1:1286430/289‑1 (MQ=255)
                                                                                                                         ggTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            <  1:778564/280‑1 (MQ=255)
                                                                                                                         ggTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGatat                                                                                                                                                   >  1:1347836/1‑289 (MQ=255)
                                                                                                                           tCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGAtata                                                                                                                                                  <  2:1347836/288‑1 (MQ=255)
                                                                                                                              gtggtgACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATAcaca                                                                                                                                              >  1:688158/1‑289 (MQ=255)
                                                                                                                               tggtgACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATAcaca                                                                                                                                              >  1:150751/1‑288 (MQ=255)
                                                                                                                                     cTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCggg                                                                                                                                                                >  1:1484731/1‑264 (MQ=255)
                                                                                                                                     cTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGACCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCg                                                                                                                                       >  2:199380/1‑289 (MQ=255)
                                                                                                                                        tCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCggg                                                                                                                                     <  2:1853012/288‑1 (MQ=255)
                                                                                                                                           gcgcAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAacc                                                                                                                                                                                                                                                    >  1:1605074/1‑174 (MQ=255)
                                                                                                                                                 tAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTa                                                                                                                            >  1:120930/1‑288 (MQ=255)
                                                                                                                                                   aGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCg                                                                                                                         <  1:1103057/289‑1 (MQ=255)
                                                                                                                                                   aGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCg                                                                                                                         <  1:1195968/289‑1 (MQ=255)
                                                                                                                                                   aGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCg                                                                                                                         <  1:826247/289‑1 (MQ=255)
                                                                                                                                                   aGCTTCGCGAAAAAGAGTCAGGAATAAGCGAAGAACAAGCTCTTTTCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCg                                                                                                                         <  2:907091/289‑1 (MQ=255)
                                                                                                                                                        cgcgAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGGTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGc                                                                                                                     >  2:795507/1‑288 (MQ=255)
                                                                                                                                                         gcgAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGaa                                                                                                                                <  2:166429/276‑1 (MQ=255)
                                                                                                                                                         gcgAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGaa                                                                                                                                >  1:166429/1‑276 (MQ=255)
                                                                                                                                                                       ggAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  >  2:120465/1‑196 (MQ=255)
                                                                                                                                                                       ggAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGccc                                                                                                                                                          >  2:512612/1‑236 (MQ=255)
                                                                                                                                                                       ggAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaata                                                                                                     >  2:624172/1‑289 (MQ=255)
                                                                                                                                                                         gaTAAGCGAAGACAAATCCCTTTGCCGACAGGAGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaataa                                                                                                    <  2:1296212/287‑1 (MQ=255)
                                                                                                                                                                         aaTAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaataa                                                                                                    <  1:1566105/288‑1 (MQ=255)
                                                                                                                                                                           tAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGaa                                                                                                                                >  2:1312632/1‑258 (MQ=255)
                                                                                                                                                                           tAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaataaata                                                                                                 >  1:197984/1‑289 (MQ=255)
                                                                                                                                                                             aGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATc                                                                                               >  1:459674/1‑289 (MQ=255)
                                                                                                                                                                             aGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATc                                                                                               >  1:842957/1‑289 (MQ=255)
                                                                                                                                                                                gaagaaAAATCCCTTGGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCg                                                                                              <  1:1084206/287‑1 (MQ=255)
                                                                                                                                                                                 aagaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTa                                                                                            <  2:229790/288‑1 (MQ=255)
                                                                                                                                                                                  agaaAACTCCCTTTGACGACAGTAGCAAATTCACTCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGAGTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACa                                                                                          <  2:1077907/289‑1 (MQ=255)
                                                                                                                                                                                  agaaAAATCCCTCTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTg                                                                                                                 <  1:1754365/266‑1 (MQ=255)
                                                                                                                                                                                         tCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCCCCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATaccacc                                                                                   <  2:966647/289‑1 (MQ=255)
                                                                                                                                                                                         tCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATaccacc                                                                                   <  1:1772460/289‑1 (MQ=255)
                                                                                                                                                                                                   gACAGGGGCAAATTAAGTTCCGCCAGGTGGACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGAGCGCGAAGCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGca                                                                         <  2:573450/289‑1 (MQ=255)
                                                                                                                                                                                                       ggCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGCGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCCGCATGTACCCTTCAGTACGCGGCGGCCAGCCCGGGCTATACACACAACCCGGGACGAATTTATCGACGCCCGACCCAACGGAATAAATAACCAACATACCACCAGAGttacaaaag                                                                      >  2:936929/1‑281 (MQ=255)
                                                                                                                                                                                                        gcgcACATTGAATCTCGTCAAGTGTACGCATGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCAGATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAgg                                                                     <  2:367759/288‑1 (MQ=255)
                                                                                                                                                                                                         cgcAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAgg                                                                     <  1:1306105/287‑1 (MQ=255)
                                                                                                                                                                                                         cgaaaaTTAAATCACGTCGGGGGTACGGAGGTTAGTTACGACAATGCGTTCACCGAGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAgg                                                                     <  2:350522/284‑1 (MQ=255)
                                                                                                                                                                                                                  aaTCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGc                                                                                                                                                                                                                                        >  2:406871/1‑115 (MQ=255)
                                                                                                                                                                                                                  aaTCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGc                                                                                                                                                                                                                                        <  1:406871/115‑1 (MQ=255)
                                                                                                                                                                                                                   atcccggccggTGTACGCAGGTTAGTTTCGGCAATGCGTTCACCGCGATTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGACCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCAttgaga                                                         <  2:811553/280‑6 (MQ=255)
                                                                                                                                                                                                                                       gttagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAAc                                                                                                           <  2:1062221/219‑1 (MQ=255)
                                                                                                                                                                                                                                       gttagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGc                                     >  1:89466/1‑289 (MQ=255)
                                                                                                                                                                                                                                          agttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATc                                  <  1:1418899/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     tGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGata                                                                                                                                                    <  1:1747616/164‑1 (MQ=255)
                                                                                                                                                                                                                                                      gCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGa                      <  1:349758/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                cgcTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATa             >  1:527902/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                    tGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            >  1:281090/1‑141 (MQ=255)
                                                                                                                                                                                                                                                                                 |||                                                                                                                                                                                                                                                                                       
AAGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAA‑ATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCACTTTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATACTGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGTGCCAT  >  CP042583/1975033‑1975586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A