Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,975,305 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,975,3050AT99.5% 956.4 / NA 401intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (174/224);  minor base G (1/1);  total (176/225)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,975,3060CG99.5% 959.8 / NA 401intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (175/224);  minor base T (1/1);  total (176/225)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,975,3070TA99.5% 956.4 / NA 401intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (175/223);  minor base G (1/1);  total (176/225)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 401 total aligned reads displayed.

TAAAGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCACTTTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATACTGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGTGCCAT  >  CP042583/1975031‑1975586
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                          
       aTCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATa                                                                                                                                                                                                                                                                         <  1:704604/288‑1 (MQ=255)
        tCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACCGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACTGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TGTTGGCGCGATaa                                                                                                                                                                                                                                                                        >  1:795595/1‑288 (MQ=255)
              ccAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCTCTTGCGTTCGCGCTCTGATTGCA‑TCTTTGAGCGATAAACga                                                                                                                                                                                                                                                                    >  2:1602434/1‑285 (MQ=255)
                       ttGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCa                                                                                                                                                                                                                                                         >  1:1431267/1‑288 (MQ=255)
                        tgagcAGTTCGCCAACAACCGGATCATCCGGATGGTGGGGGGTCTGCCGGGCGGGTTCTGGCGCGGTTAAGGCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                        <  2:1130997/285‑1 (MQ=255)
                        tGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                        <  2:2389845/288‑1 (MQ=255)
                           gcAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAacca                                                                                                                                                                                                                                                     <  2:1645659/288‑1 (MQ=255)
                                     aaTCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATCGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGc                                                                                                                                                                                                                                          <  1:918584/289‑1 (MQ=255)
                                      aTCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCg                                                                                                                                                                                                                                         <  1:1403738/289‑1 (MQ=255)
                                         aCCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTTGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGgac                                                                                                                                                                                                                                      >  1:1569814/1‑289 (MQ=255)
                                         aCCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGgac                                                                                                                                                                                                                                      >  2:393547/1‑289 (MQ=255)
                                          ccGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGgacg                                                                                                                                                                                                                                     <  1:994675/289‑1 (MQ=255)
                                                  tcaAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCtt                                                                                                                                                                                                                             >  1:413601/1‑289 (MQ=255)
                                                          atCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATa                                                                                                                                                                                                                                                                         >  1:2320976/1‑237 (MQ=255)
                                                           tCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATa                                                                                                                                                                                                                     <  1:1311587/288‑1 (MQ=255)
                                                                       cAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTGGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACa                                                                                                                                                                                                        <  1:2611546/289‑1 (MQ=255)
                                                                            gggTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                    <  2:1900964/288‑1 (MQ=255)
                                                                              gTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCCGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAg                                                                                                                                                                                                 >  1:2112857/1‑289 (MQ=255)
                                                                                tCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCa                                                                                                                                                                                                  <  2:2037017/286‑1 (MQ=255)
                                                                                   tGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCt                                                                                                                                                                                            <  2:1091819/289‑1 (MQ=255)
                                                                                           tAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                     <  1:289955/288‑1 (MQ=255)
                                                                                           tAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                     <  1:1711401/288‑1 (MQ=255)
                                                                                                  gTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCTCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTTCACCAGCCTCAGTGCCTGCAGGTActggtccg                                                                                                                                                                             >  2:1535127/1‑282 (MQ=255)
                                                                                                    cATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAgg                                                                                                                                                                            >  1:584062/1‑288 (MQ=255)
                                                                                                    cATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGAACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAgg                                                                                                                                                                            >  1:2260571/1‑288 (MQ=255)
                                                                                                      tatTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGAACGCTTCCTGCAACAGCATCAGTGCCTGCCTGTACGTTTCAGGAc                                                                                                                                                                          >  2:143968/1‑288 (MQ=255)
                                                                                                                cATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCa                                                                                                                                                                >  2:1763844/1‑288 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGCCTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCCCTTGCGTTCGCGCTCTGATTGCC‑TATTGGCGCGATAAACGCCCTGCTCGCCAACCACCCGGGAGAGCGTACGCCGTTCCTTGCCGAAAGAGTCCTGCACCAGCATCAGCGCCTGCATGTACGTTTAAGGACGGGGAGGGAAGcca                                                                                                                                                            >  2:440764/1‑288 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCTCGAAATCAATTTGGGAATAAGCGAAGAAAAATCCCTTGGCCGACAGGCGCAAATTAAATCTCGTCAGGGGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGccc                                                                                                                                                            <  2:1029873/289‑1 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGT‑AGCTTCGCGAAATTGAATTTGGGATAAGCGAAGAAAAATTCCTTTTCCGACAGGCGCCAATTAAATTCCGTCAGGTGTACGGCGGGTAGTTACGGCCATGCGTTCACCGCCGTTGCGTTCGCCGTCTGGTTGCATTATTGCCCGGAAAACGGCCTTGTTCG‑CAAACACCCCGGAGAACGGACCGAGTTCTTTTCCCATAAGTTCCTTGAACAGCATTCGTTGCCGCAAGTACGGTTCAGGACGCGGGCGGCAGCCCg                                                                                                                                                           >  2:1249019/1‑289 (MQ=255)
                                                                                                                      aaaTGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCggg                                                                                                                                                         <  1:1485714/289‑1 (MQ=255)
                                                                                                                          ggTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGgcg                                                                                                                                                                                                                                                                              <  2:897828/168‑1 (MQ=255)
                                                                                                                            tCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                        <  2:1548818/188‑1 (MQ=255)
                                                                                                                            tCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                        >  1:1548818/1‑188 (MQ=255)
                                                                                                                            tCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                        >  2:695701/1‑188 (MQ=255)
                                                                                                                            tCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ac                                                                                                                                                 >  1:2071140/1‑289 (MQ=255)
                                                                                                                            tCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATAACTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATTT‑‑ac                                                                                                                                                 >  1:2018345/1‑289 (MQ=255)
                                                                                                                               gtggtgACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑acac                                                                                                                                               >  2:2426211/1‑288 (MQ=255)
                                                                                                                                      cTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCg                                                                                                                                       >  1:1640952/1‑289 (MQ=255)
                                                                                                                                       tGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGc                                                                                                                                                                                                            >  1:132945/1‑221 (MQ=255)
                                                                                                                                           ggCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGgacg                                                                                                                                                                                                                                     <  1:966542/192‑1 (MQ=255)
                                                                                                                                            gcgcAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                     <  1:1095412/239‑1 (MQ=255)
                                                                                                                                              gcAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGaa                                                                                                                                <  1:2644946/288‑1 (MQ=255)
                                                                                                                                                 gTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCa                                                                                                                                                                                                  <  2:1322227/221‑1 (MQ=255)
                                                                                                                                                 gTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGcc                                                                                                                                                                                             <  2:959365/226‑1 (MQ=255)
                                                                                                                                                 gTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTa                                                                                                                            >  2:1626204/1‑289 (MQ=255)
                                                                                                                                                    aGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCg                                                                                                                         <  1:691573/289‑1 (MQ=255)
                                                                                                                                                    aGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCg                                                                                                                         <  1:530611/289‑1 (MQ=255)
                                                                                                                                                    aGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCg                                                                                                                         <  1:467349/289‑1 (MQ=255)
                                                                                                                                                    aGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCg                                                                                                                         <  2:122276/289‑1 (MQ=255)
                                                                                                                                                       ttCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGAc                                                                                                                       >  1:2533135/1‑288 (MQ=255)
                                                                                                                                                       ttCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACg                                                                                                                      <  1:159273/289‑1 (MQ=255)
                                                                                                                                                          gcgAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCCGGACGCGGCGGGCAGCCCGGGCTAT‑‑AACCATCAACCGGGACGAATTTaa                                                                                                                           >  2:1334246/1‑280 (MQ=255)
                                                                                                                                                                tAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                    >  2:2179337/1‑204 (MQ=255)
                                                                                                                                                                tAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCggg                                                                                                                                                         >  2:2298278/1‑247 (MQ=255)
                                                                                                                                                                tAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCggg                                                                                                                                                         <  1:2298278/247‑1 (MQ=255)
                                                                                                                                                                tAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGcc                                                                                                                    <  1:3423/282‑1 (MQ=255)
                                                                                                                                                                tAGAGTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGcaca                                                                                                             <  2:610657/289‑1 (MQ=255)
                                                                                                                                                                   aTTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACg                                                                                                          >  1:1522711/1‑289 (MQ=255)
                                                                                                                                                                       aGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaat                                                                                                      <  2:2327339/289‑1 (MQ=255)
                                                                                                                                                                        ggAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                              >  2:2491617/1‑234 (MQ=255)
                                                                                                                                                                        ggAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                              <  1:2491617/234‑1 (MQ=255)
                                                                                                                                                                          aaTAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                     >  2:2641689/1‑209 (MQ=255)
                                                                                                                                                                          aaTAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaat                                                                                                      <  2:2112445/288‑1 (MQ=255)
                                                                                                                                                                             aaGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaataaata                                                                                                 >  1:1085384/1‑288 (MQ=255)
                                                                                                                                                                              aGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                     >  1:1012825/1‑205 (MQ=255)
                                                                                                                                                                              aGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                     >  2:738394/1‑205 (MQ=255)
                                                                                                                                                                                 gaataaAAATGCCTTTGCCGACAGCCGCAAATTAAATCGCGTCAGGTGTACGCGGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGGTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGAAGCGGCGGGCAGACCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCg                                                                                              <  2:1694180/287‑1 (MQ=255)
                                                                                                                                                                                 gaagaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTa                                                                                            <  1:1264968/289‑1 (MQ=255)
                                                                                                                                                                                   agaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                        <  2:2681649/133‑1 (MQ=255)
                                                                                                                                                                                    gaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGt                                                                                                                                                                                                <  2:659694/188‑1 (MQ=255)
                                                                                                                                                                                               ttGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCACCCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGt                                                                              >  2:2591930/1‑289 (MQ=255)
                                                                                                                                                                                                         gcgcAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGAcgcg                                                                                                                                                                       >  1:393393/1‑192 (MQ=255)
                                                                                                                                                                                                           gcAAATTTAGTCACGTCAGGTGGACGCAGGTTAGTTACGGCAATGCGGTCACCGCGCGTGCGTTCGCGCTATGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCa                                                                   <  2:2731512/288‑1 (MQ=255)
                                                                                                                                                                                                               gtttataagagccAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCAt                                                              <  1:2383296/277‑1 (MQ=255)
                                                                                                                                                                                                               aTTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGACCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCAt                                                              <  2:1834243/289‑1 (MQ=255)
                                                                                                                                                                                                                     tctcGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCAttgagat                                                        <  1:850061/289‑7 (MQ=255)
                                                                                                                                                                                                                         gTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaat                                                                                                      >  1:1224010/1‑239 (MQ=255)
                                                                                                                                                                                                                                 tACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTgg                                            >  1:184548/1‑289 (MQ=255)
                                                                                                                                                                                                                                        gttagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGc                                     >  1:2191455/1‑289 (MQ=255)
                                                                                                                                                                                                                                        gttagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGc                                     >  2:423320/1‑289 (MQ=255)
                                                                                                                                                                                                                                         ttagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAAc                                                                                                           >  1:1944569/1‑218 (MQ=255)
                                                                                                                                                                                                                                          tagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TTTTGGCGAGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCa                                    <  1:64514/288‑1 (MQ=255)
                                                                                                                                                                                                                                          tagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCa                                    <  1:145806/288‑1 (MQ=255)
                                                                                                                                                                                                                                           agttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCTGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATc                                  <  1:136223/289‑1 (MQ=255)
                                                                                                                                                                                                                                           agttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGAAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATc                                  <  2:562265/289‑1 (MQ=255)
                                                                                                                                                                                                                                               aCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGt                              <  1:1626204/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  gCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAGCGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACa                                                                                          <  2:343512/226‑1 (MQ=255)
                                                                                                                                                                                                                                                  gCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaat                                                                                                      >  2:1082636/1‑214 (MQ=255)
                                                                                                                                                                                                                                                  gCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTCATCGACGGCATGCACAACGGAAAAAATATCGTACATACCACCACAGTTGGCACAGGCACCCATTGAGATAAGCCATTTTGGTTCCAGCATCTGGTCAt                           >  1:2705988/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    aaTGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATAc                         >  1:1183561/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      tGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATc                                                                                                                                                                                                   <  2:1266654/119‑1 (MQ=255)
                                                                                                                                                                                                                                                      tGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCg                                                                                                                         <  2:47406/191‑1 (MQ=255)
                                                                                                                                                                                                                                                      tGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCAt                                                              >  2:1475836/1‑250 (MQ=255)
                                                                                                                                                                                                                                                         gTTCACCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACTGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACg                    <  2:1381270/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             aCCGCGCTTGCGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                     <  1:1032207/126‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gCGTTCGCGCCCTGATTGCA‑TATTGGCGCGATAAACGCCCTAATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGt       <  1:1797885/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       cGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGt       >  1:443803/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       cGTTCGCGCTCTGATTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCACTGCACAACGGAATAACTATCGTACATACCACCAGAGTAGGCACAGGCACCCAttaaga                                                         >  2:2006606/1‑233 (MQ=255)
                                                                                                                                                                                                                                                                           cgcgCTCTGATTGCC‑TATTGACCCGATACACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGTGCCAt  <  2:1183561/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                          
TAAAGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCACTTTGCA‑TATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATAT‑‑ACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATACTGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGTGCCAT  >  CP042583/1975031‑1975586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A