Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,975,305 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,975,3050AT100.0% 680.2 / NA 287intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (137/150);  total (137/150)
*CP0425831,975,3060CG100.0% 680.4 / NA 287intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (137/150);  total (137/150)
*CP0425831,975,3070TA99.7% 677.7 / NA 287intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (136/150);  total (137/150)
Fisher's exact test for biased strand distribution p-value = 4.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 287 total aligned reads displayed.

TAAAGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCACTTTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATACTGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGTGCCAT  >  CP042583/1975031‑1975586
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                       
  aaGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGgcgc                                                                                                                                                                                                                                                                           <  1:590880/289‑1 (MQ=255)
        tCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCCGGTTAGTTACGGCAATGCGGTCACCGCTCTTGCCTTCGCGCCCTGATTGCCTTTTGgcgctgaaaa                                                                                                                                                                                                                                                                     >  2:1034767/1‑283 (MQ=255)
        tCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATaa                                                                                                                                                                                                                                                                      >  1:1966602/1‑288 (MQ=255)
        tCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATaa                                                                                                                                                                                                                                                                      >  1:1503343/1‑288 (MQ=255)
          cGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAAc                                                                                                                                                                                                                                                                    >  1:953020/1‑288 (MQ=255)
          cGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAAc                                                                                                                                                                                                                                                                    >  2:53294/1‑288 (MQ=255)
          cGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTAACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAAc                                                                                                                                                                                                                                                                    >  1:1530802/1‑288 (MQ=255)
             cccAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGccc                                                                                                                                                                                                                                                                <  2:825849/289‑1 (MQ=255)
                     ggTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGcc                                                                                                                                                                                                                                                        >  1:562006/1‑289 (MQ=255)
                        tGCGGAGGTCGCCAATATCCGGATCATCAAGATGATCCGGGGTCTGCCAGGCGTGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCTCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTGTTCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                      <  2:1530802/288‑1 (MQ=255)
                        tGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                      <  1:1718026/288‑1 (MQ=255)
                        tGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                      <  1:325311/288‑1 (MQ=255)
                             aGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCAccc                                                                                                                                                                                                                                                >  1:574876/1‑289 (MQ=255)
                              gTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCa                                                                                                                                                                                                                                               >  2:857423/1‑289 (MQ=255)
                                    cAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGgaga                                                                                                                                                                                                                                          >  1:519239/1‑288 (MQ=255)
                                     aaTCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGc                                                                                                                                                                                                                                        <  1:821726/289‑1 (MQ=255)
                                      aTCACCGGATCCTCAAGGTGATCGGGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCg                                                                                                                                                                                                                                       <  2:908601/289‑1 (MQ=255)
                                       tCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCgg                                                                                                                                                                                                                                      >  1:371277/1‑289 (MQ=255)
                                                  tcaAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCtt                                                                                                                                                                                                                           >  1:15423/1‑289 (MQ=255)
                                                                ggTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGAtt                                                                                                                                                                                                               >  1:390621/1‑287 (MQ=255)
                                                                ggTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGAtt                                                                                                                                                                                                               >  1:777228/1‑287 (MQ=255)
                                                                 gTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTcc                                                                                                                                                                                                             <  1:1750300/288‑1 (MQ=255)
                                                                   cTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGc                                                                                                                                                                                                          <  1:493837/289‑1 (MQ=255)
                                                                    tGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCa                                                                                                                                                                                                         >  1:663002/1‑289 (MQ=255)
                                                                      ccAGGCAGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGAAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAAc                                                                                                                                                                                                       <  2:1447436/289‑1 (MQ=255)
                                                                       cAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACa                                                                                                                                                                                                      <  2:668337/289‑1 (MQ=255)
                                                                            gggTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  <  1:18409/288‑1 (MQ=255)
                                                                            gggTGCTGGCGCGGTTAAGTCGTGCAATTTGTTCACCATTGCAAATGGTCCGTGGTGACGGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCAt                                                                                                                                                                                                  <  2:1677922/288‑1 (MQ=255)
                                                                                tcgtgagcgGTTAAGTCGTTCATATTGTTCACCATTGCAAATGGTCCGTGGTGAATGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAAGAAGCGATGAAAAATCCCTTTGCCGACAGGCGCAAATTAAAGCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTg                                                                                                                                                                                             <  2:1372648/283‑1 (MQ=255)
                                                                                tCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGt                                                                                                                                                                                              <  1:1259032/288‑1 (MQ=255)
                                                                                tCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGt                                                                                                                                                                                              >  1:403886/1‑288 (MQ=255)
                                                                                tCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTg                                                                                                                                                                                             <  1:1507417/289‑1 (MQ=255)
                                                                                   tGCGGGGTTGAGTCTGTCATATTGTTAACCATTGCGAATGGTACGTGGTTACTGTCGGCGCAGTAAGCTTCGCGAAATAGATGTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTACATCTCGTCTGTTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGGCCTGATCGCCAACCACCCAGGAGGGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCt                                                                                                                                                                                          <  2:12163/289‑1 (MQ=255)
                                                                                           tAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAGTTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                   <  2:211296/288‑1 (MQ=255)
                                                                                            aaGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAAc                                                                                                                                                                                                                                                                    <  2:1798028/206‑1 (MQ=255)
                                                                                            aaGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAAc                                                                                                                                                                                                                                                                    >  1:1798028/1‑206 (MQ=255)
                                                                                                    cATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAgg                                                                                                                                                                          <  1:53294/288‑1 (MQ=255)
                                                                                                    cATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCGTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAgg                                                                                                                                                                          >  1:1247689/1‑288 (MQ=255)
                                                                                                        ttGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                   >  2:486752/1‑275 (MQ=255)
                                                                                                            tCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGcggcgg                                                                                                                                                                 >  1:1605525/1‑289 (MQ=255)
                                                                                                             cACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGTATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGcggcgg                                                                                                                                                                 >  2:254344/1‑288 (MQ=255)
                                                                                                             cACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAgg                                                                                                                                                                                                                                             >  2:101755/1‑212 (MQ=255)
                                                                                                             cACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAgg                                                                                                                                                                                                                                             <  1:101755/212‑1 (MQ=255)
                                                                                                             cACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGcggcgg                                                                                                                                                                 >  1:1166133/1‑288 (MQ=255)
                                                                                                             cACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCggg                                                                                                                                                                <  1:1009325/289‑1 (MQ=255)
                                                                                                                 aTTGCAATGTGTCCGGTGTGACTGTCGGCACAGTAAGCTTCGCGAAATAGATGTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            <  2:17520/289‑1 (MQ=255)
                                                                                                                 aTTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            <  1:1906128/289‑1 (MQ=255)
                                                                                                                 aTTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            <  1:1821129/289‑1 (MQ=255)
                                                                                                                 aTTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            <  1:1275971/289‑1 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGCTAGATTCCTGCAACAGCATCAGTGCCTGCAGGTTCCCTTCAGGACGCGGCGGGCAccc                                                                                                                                                           >  2:1843296/1‑288 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGAcgcg                                                                                                                                                                     >  2:776217/1‑278 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGccc                                                                                                                                                          >  2:126277/1‑289 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGccc                                                                                                                                                          >  1:9204/1‑289 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGccc                                                                                                                                                          >  1:90632/1‑289 (MQ=255)
                                                                                                                   tGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGccc                                                                                                                                                          >  1:484004/1‑289 (MQ=255)
                                                                                                                     cAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGcc                                                                                                                                                                                                                                                        >  2:391848/1‑193 (MQ=255)
                                                                                                                     cAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTa                                                                                                                                                                                   >  1:453232/1‑262 (MQ=255)
                                                                                                                      aaaTGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCggg                                                                                                                                                       <  1:1034767/289‑1 (MQ=255)
                                                                                                                          ggTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGc                                                                                                                                                            <  2:361023/280‑1 (MQ=255)
                                                                                                                          ggTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCgg                                                                                                                                                        >  1:761667/1‑284 (MQ=255)
                                                                                                                          ggTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGatat                                                                                                                                                   <  1:1861009/289‑1 (MQ=255)
                                                                                                                             ccGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATac                                                                                                                                                 >  1:1397014/1‑288 (MQ=255)
                                                                                                                                      cTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATCCACATCAACCg                                                                                                                                       >  2:648111/1‑289 (MQ=255)
                                                                                                                                          cGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAg                                                                                                                                                                                                                  >  1:1456285/1‑210 (MQ=255)
                                                                                                                                                    aGCTTCGCGAAATAGAATTAGGAATAAGCGAAAAAAAATCCCTTGGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCg                                                                                                                         <  2:1111692/289‑1 (MQ=255)
                                                                                                                                                       ttagcgAAATAGAATTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAAGCTCAAATTAAATCGCGTCAGGTGTACGCAGGTTAGTTACGGCAAGGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACg                                                                                                                      <  2:519928/286‑1 (MQ=255)
                                                                                                                                                       ttCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACg                                                                                                                      <  2:1605525/289‑1 (MQ=255)
                                                                                                                                                          gcgAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACCCATCAACCGGGATGAATTTATCGACGcc                                                                                                                    >  2:576243/1‑288 (MQ=255)
                                                                                                                                                          gcgAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGcc                                                                                                                    >  2:114666/1‑288 (MQ=255)
                                                                                                                                                                tAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGcaca                                                                                                             <  2:1981794/289‑1 (MQ=255)
                                                                                                                                                                tAGATTTAGGAAAGAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGcaca                                                                                                             <  2:1305850/289‑1 (MQ=255)
                                                                                                                                                                   aTTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACg                                                                                                          >  1:984259/1‑289 (MQ=255)
                                                                                                                                                                    tttAGGAATAAGCGAAGAAAAATCCATGTCCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAAc                                                                                                           <  2:50303/287‑1 (MQ=255)
                                                                                                                                                                     ttAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGa                                                                                                        <  1:1324329/289‑1 (MQ=255)
                                                                                                                                                                       aGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaat                                                                                                      <  2:713120/289‑1 (MQ=255)
                                                                                                                                                                       aGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaat                                                                                                      <  1:254344/289‑1 (MQ=255)
                                                                                                                                                                        ggAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGGACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTGGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCGGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGaat                                                                                                      <  2:1557800/288‑1 (MQ=255)
                                                                                                                                                                              aGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCATTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATc                                                                                               >  1:1092605/1‑289 (MQ=255)
                                                                                                                                                                               gCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACg                                                                                                                      >  1:1112454/1‑265 (MQ=255)
                                                                                                                                                                                 gaagaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCg                                                                                              <  2:562006/287‑1 (MQ=255)
                                                                                                                                                                                   agaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGata                                                                                                                                                    >  1:1205957/1‑231 (MQ=255)
                                                                                                                                                                                   agaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACa                                                                                          <  1:672351/289‑1 (MQ=255)
                                                                                                                                                                                   agaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACa                                                                                          <  2:193032/289‑1 (MQ=255)
                                                                                                                                                                                    gaaAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACAt                                                                                         >  1:834468/1‑289 (MQ=255)
                                                                                                                                                                                               ttGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGt                                                                              >  2:432458/1‑289 (MQ=255)
                                                                                                                                                                                                    gACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGca                                                                         <  2:1331307/289‑1 (MQ=255)
                                                                                                                                                                                                      cAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGcc                                                                                                                                                           <  2:463704/205‑1 (MQ=255)
                                                                                                                                                                                                          cgcAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAgg                                                                     <  1:1563062/287‑1 (MQ=255)
                                                                                                                                                                                                                    aTCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCAttgaga                                                         <  2:606206/289‑6 (MQ=255)
                                                                                                                                                                                                                           cAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAAccc                                                   <  1:288745/288‑1 (MQ=255)
                                                                                                                                                                                                                                        gttagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAAc                                                                                                           >  2:96240/1‑219 (MQ=255)
                                                                                                                                                                                                                                        gttagttaCGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGc                                     >  1:753192/1‑289 (MQ=255)
                                                                                                                                                                                                                                               aCGGCAATGGTTTCACCGCGCTTGCGTTCCGGCTCTGATTGAATATGGGCGCGATAAACGCCCTGAGAGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGt                              <  2:1198031/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaTGCCGTCACCGCGCTTGCGTTCGCGGTCTGATTGAATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATa                          <  2:936021/288‑1 (MQ=255)
                                                                                                                                                                                                                                                      tGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCAttt                                               >  2:149667/1‑265 (MQ=255)
                                                                                                                                                                                                                                                      tGCGTTCACCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGACATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCCACCATTGAGATAACCCATTTTGGTTCCAGCCTTGGGTCATACAg                       >  2:28452/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             aCCGCGCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCaa                                                                                                                                                                                                                                                      >  2:1861685/1‑59 (MQ=255)
                                                                                                                                                                                                                                                               cgcgCTTGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATAACGTACCAACCACCAGAGTTGGCACAGGCCACCATTGAAATAACCCATTTTGGTTCCACCATCCGGTCACACAGACGCCGaac              >  2:921217/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  gcTTGCTGTCGCGGTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACGCAGGGGAGCGGACGACGGTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCGTCAGGGCGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTAGCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAAc           <  2:757895/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     tGCGTTCGCGCTCTGATTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCAATTGAGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCgg        >  1:625844/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                       
TAAAGGCATCCGGCCCAAAACGGTTGCGCAGTTCGCCAATCACCGGATCATCAAGATGATCGCGGGTCTGCCAGGCGGGTTCTTGCGCGGTTAAGTCGGTCATATTGTTCACCATTGCAAATGGTCCGTGGTGACTGTCGGCGCAGTAAGCTTCGCGAAATAGATTTAGGAATAAGCGAAGAAAAATCCCTTTGCCGACAGGCGCAAATTAAATCTCGTCAGGTGTACGCAGGTTAGTTACGGCAATGCGTTCACCGCGCTTGCGTTCGCGCTCACTTTGCATATTGGCGCGATAAACGCCCTGATCGCCAACCACCCAGGAGAGCGGACGACGTTCTTTGCCGATAGATTCCTGCAACAGCATCAGTGCCTGCATGTACGCTTCAGGACGCGGCGGGCAGCCCGGGATATACACATCAACCGGGATGAATTTATCGACGCCCTGCACAACGGAATAAATATCGTACATACCACCAGAGTTGGCACAGGCACCCATACTGATAACCCATTTTGGTTCCAGCATCTGGTCATACAGACGCTGAATAACCGGTGCCAT  >  CP042583/1975031‑1975586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A