Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,479,952 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,479,9520AT98.7% 546.9 / NA 233intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/3);  new base T (118/112);  total (118/115)
Fisher's exact test for biased strand distribution p-value = 1.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,479,9530CG99.6% 548.7 / NA 233intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (117/113);  total (118/115)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,479,9540TA99.6% 554.4 / NA 233intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (118/114);  minor base G (0/1);  total (118/115)
Fisher's exact test for biased strand distribution p-value = 4.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 233 total aligned reads displayed.

AGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAAACTACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCAGCGTGCCTTTCAGGTTGGT  >  CP042583/1479675‑1480233
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
      tCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGa                                                                                                                                                                                                                                                                           <  1:965874/288‑1 (MQ=255)
          cgccgACAGTCACTTGTGGCACACGCAGTTGGGAAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCg                                                                                                                                                                                                                                                                      <  1:1238687/289‑1 (MQ=255)
                           gTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAg                                                                                                                                                                                                                                                     >  1:1518030/1‑289 (MQ=255)
                            tCACACGCAATGTGTCAGCGTTCGGATGCTGGGCACACTCAACCACTGCGCCACCGACCCCGCCGTGGAAGCTGCGGGCAACCGGTGCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGa                                                                                                                                                                                                                                                    <  2:1835305/289‑1 (MQ=255)
                             cacaCGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGAc                                                                                                                                                                                                                                                   >  2:875604/1‑289 (MQ=255)
                                 cGCAGTTCGGCCTCGTGCCGAAGCAGCGCACACCCAACCCCGTCACCCACGCACACGCCGTGGAAGCTGCCGGCAACCGGTTCCACACCGTCAACTTCCGGGCCCGACATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTc                                                                                                                                                                                                                                               <  2:1013169/289‑1 (MQ=255)
                                          tCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTccatcccca                                                                                                                                                                                                                                       >  1:1612447/1‑288 (MQ=255)
                                            aGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTCCACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCGATTCCTGCCTTATTTAAACTGCTTGAGGAAACGCAGACAGTTTTCGCAGAATGAAACAAAGTCGGTCACTCCGTAACCCAACCAAGTCAGACCCTcccacccctcc                                                                                                                                                                                                                                     >  2:1313614/1‑285 (MQ=255)
                                                ttCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGaa                                                                                                                                                                                                                                >  1:548403/1‑289 (MQ=255)
                                                ttCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACCCAACAATGCCAGACGCCCCATCCCCATCCCGaa                                                                                                                                                                                                                                >  2:724078/1‑289 (MQ=255)
                                                  cGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAgg                                                                                                                                                                                                                              <  1:1911587/289‑1 (MQ=255)
                                                                acTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTaa                                                                                                                                                                                                                <  1:800741/289‑1 (MQ=255)
                                                                  tCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGCAACCAGAGTaaa                                                                                                                                                                                                               >  2:1552279/1‑288 (MQ=255)
                                                                  tCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACAACGTCAGACGCTCCATCCCCATCCCGAAGCCGAAACCAGAGTaa                                                                                                                                                                                                                >  2:678722/1‑287 (MQ=255)
                                                                   cAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCAAAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATGGTTAGACGCCACATCCCACTCCCGAAGGCGAAACCAGCGAAAACt                                                                                                                                                                                                             >  2:1449941/1‑289 (MQ=255)
                                                                          ttCCCCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGa                                                                                                                                                                                                                                                                           <  2:957792/220‑1 (MQ=255)
                                                                          ttCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCggg                                                                                                                                                                                                       >  1:1531958/1‑288 (MQ=255)
                                                                           ccaccacCGACCACGCCGTGGAAGCGGCCGGAAACCGGTTCTACCCCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTc                                                                                                                                                                                                     <  2:755100/288‑1 (MQ=255)
                                                                            cACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCg                                                                                                                                                                                                    >  1:1131726/1‑289 (MQ=255)
                                                                                accgcccccGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGc                                                                                                                                                                                                <  2:1131726/281‑1 (MQ=255)
                                                                                    aCCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCaa                                                                                                                                                                                             >  2:1196090/1‑288 (MQ=255)
                                                                                    aCCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCAAAc                                                                                                                                                                                            >  2:453554/1‑289 (MQ=255)
                                                                                        cGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCAATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGtt                                                                                                                                                                                         >  1:684476/1‑288 (MQ=255)
                                                                                              ggagggtcccGGCAAACGGTTCTCAACAGTCAACTGCCGGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAAACACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCaa                                                                                                                                                                                   <  2:1277204/280‑1 (MQ=255)
                                                                                              ggAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCaa                                                                                                                                                                                   <  1:1154069/288‑1 (MQ=255)
                                                                                              ggAAGCTGCCGGCAACCGGTTCTAAACCGGCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCaa                                                                                                                                                                                   <  1:1388636/288‑1 (MQ=255)
                                                                                                 aGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACg                                                                                                                                                                               <  1:982689/289‑1 (MQ=255)
                                                                                                 aGCTGCCGACAACCGTTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACg                                                                                                                                                                               <  1:101553/289‑1 (MQ=255)
                                                                                                   cTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCCCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCCaccggt                                                                                                                                                                              >  2:77908/1‑284 (MQ=255)
                                                                                                       ctgacaCCGGTTGTCCCCCGTGACCTCCCAGGACCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATGTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGa                                                                                                                                                                         <  2:64333/284‑1 (MQ=255)
                                                                                                          cAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATg                                                                                                                                                                       <  1:1660225/288‑1 (MQ=255)
                                                                                                          aaaCCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATg                                                                                                                                                                       <  1:877533/287‑1 (MQ=255)
                                                                                                            cccGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCAc                                                                                                                                                                    <  1:483473/288‑1 (MQ=255)
                                                                                                                 ttCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATcc                                                                                                                                                               <  1:453554/289‑1 (MQ=255)
                                                                                                                   cTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCg                                                                                                                                                             <  1:835540/289‑1 (MQ=255)
                                                                                                                   cTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCg                                                                                                                                                             <  1:322535/289‑1 (MQ=255)
                                                                                                                           tCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGCGGAAACGCAGACCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCGGTAACGCAACATAGTCAGACGTGCCATCCCCATCCCGACGGCGAAACCAAAGTAAAATTCCGGGCCTCTCCCAACCTCACGCAACACGCGCGGATGCACCATCACGCaccaca                                                                                                                                                      >  2:1700295/1‑283 (MQ=255)
                                                                                                                           tCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCACCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGAAGCCAACGTAACGCAACACGTTCGGATGCACCATCCCGAAGCCCa                                                                                                                                                      >  2:992399/1‑288 (MQ=255)
                                                                                                                            cAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAg                                                                                                                                                     <  1:1068207/288‑1 (MQ=255)
                                                                                                                            cAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAg                                                                                                                                                     <  1:1409075/288‑1 (MQ=255)
                                                                                                                                                    tttgatttgCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCACCACGTTCGGATGCACAATCCCGCAGCCCAGCACTTCCAGCCATTTACCGttttt                                                                                                                             >  1:480918/1‑288 (MQ=255)
                                                                                                                                                    tttgatttgCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGttttt                                                                                                                             >  1:1436111/1‑288 (MQ=255)
                                                                                                                                                    tttgatttgCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGttttt                                                                                                                             >  1:865249/1‑288 (MQ=255)
                                                                                                                                                     ttgatttgCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTAc                                                                                                                           <  1:1578717/289‑1 (MQ=255)
                                                                                                                                                         ttttCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCa                                                                                                                        <  1:1294398/288‑1 (MQ=255)
                                                                                                                                                                 cgcATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATg                                                                                                                      <  2:1513342/282‑1 (MQ=255)
                                                                                                                                                                 cgcATCGCTATCAATCGACGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGCTGCAACATACCGCAGCCCACAACTTCCAGACATTTACCGTTTTTACTCATTCCGTcc                                                                                                                >  2:1800672/1‑288 (MQ=255)
                                                                                                                                                                  gcATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTc                                                                                                                 <  1:1190608/286‑1 (MQ=255)
                                                                                                                                                                           tCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGa                                                                                                     <  1:663688/289‑1 (MQ=255)
                                                                                                                                                                           tCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGa                                                                                                     <  2:821880/289‑1 (MQ=255)
                                                                                                                                                                                cGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGt                                                                                                 >  1:1774515/1‑288 (MQ=255)
                                                                                                                                                                                   cGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCgg                                                                                             >  1:593353/1‑289 (MQ=255)
                                                                                                                                                                                   cGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCgg                                                                                             >  2:1928244/1‑289 (MQ=255)
                                                                                                                                                                                    gggTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTCCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGt                                                                                            <  1:1825160/289‑1 (MQ=255)
                                                                                                                                                                                     ggTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTa                                                                                           >  1:1008765/1‑289 (MQ=255)
                                                                                                                                                                                       ttCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTaa                                                                                          >  1:210885/1‑288 (MQ=255)
                                                                                                                                                                                         cACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACGATCCCGCAGCCCAGCACTACCAGCCATCTACCTTTTCTACCCATGTCTACCACTTCTGCTGAAGGATCGGTAAGCg                                                                                       >  2:577756/1‑289 (MQ=255)
                                                                                                                                                                                                tCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTaa                                                                                          >  1:1258644/1‑279 (MQ=255)
                                                                                                                                                                                                tCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTaa                                                                                          <  2:1258644/279‑1 (MQ=255)
                                                                                                                                                                                                  gcgTAACCACCGTTAACGGAATTTCATAATCTATTCCTGCCTTAGTTAAACTGGTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTagg                                                                              <  2:1067528/289‑1 (MQ=255)
                                                                                                                                                                                                            aGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTCACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGaa                                                                    >  2:232308/1‑289 (MQ=255)
                                                                                                                                                                                                             gTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCACTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACTGGAAGTCGGCAGGACTGaa                                                                    >  2:1003247/1‑288 (MQ=255)
                                                                                                                                                                                                              ttCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGc                                                                  >  1:86133/1‑289 (MQ=255)
                                                                                                                                                                                                                cccTGAATGTCTTAAACTATACCTGCCTTATTTCATCGGGTTGAGGAAACGCAGATCGTTTTCGAACAATGACAGCCGGTCGGTGACGCCGGAACGCAACGTAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCATGGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGTAAGTAGGAAGGACGGAAGCGa                                                                <  2:1612447/287‑1 (MQ=255)
                                                                                                                                                                                                                 aCTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGt                                                                                                 >  2:730500/1‑255 (MQ=255)
                                                                                                                                                                                                                  cTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCGCGAAGGCCAAACCAGAGTAAACTTCCGGCTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGGTTTTACCCATGACGTCAACTCCTGCAGAATGTACGGTAAACGGTAAGGAGGACGGACATAAGCGaa                                                               >  2:1645823/1‑288 (MQ=255)
                                                                                                                                                                                                                      aTTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCg                                                                                                                                                             >  1:523967/1‑190 (MQ=255)
                                                                                                                                                                                                                      aTTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCg                                                                                                                                                             <  2:523967/190‑1 (MQ=255)
                                                                                                                                                                                                                        ttCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCaa                                                        >  1:33308/1‑289 (MQ=255)
                                                                                                                                                                                                                        ttCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCaa                                                        >  1:1512350/1‑289 (MQ=255)
                                                                                                                                                                                                                          cATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGt                                                                                                                                                                                                      <  1:851704/145‑1 (MQ=255)
                                                                                                                                                                                                                           aTAATCTATTCCTGCCTTATTTCAACTGTGTGAGGAAACGCAGATCGGTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATc                                                     <  1:1700295/289‑1 (MQ=255)
                                                                                                                                                                                                                              aTCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTc                                                  <  1:1952472/289‑1 (MQ=255)
                                                                                                                                                                                                                                         ccTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTa                                                                                                                                                                                                                 <  2:857231/119‑1 (MQ=255)
                                                                                                                                                                                                                                         ccTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATg                                                                                                                                                                       >  1:1925894/1‑161 (MQ=255)
                                                                                                                                                                                                                                         ccTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGa                                                                                    >  1:750658/1‑244 (MQ=255)
                                                                                                                                                                                                                                         ccTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGACGCGAATCTGCAAATCTTCCTCAAAGAAGt                                       >  1:1852026/1‑289 (MQ=255)
                                                                                                                                                                                                                                         ccTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGt                                       >  1:1763302/1‑289 (MQ=255)
                                                                                                                                                                                                                                         ccTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGt                                       >  2:145700/1‑289 (MQ=255)
                                                                                                                                                                                                                                         ccTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAAAGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCAc                                                                                                              <  2:1519666/218‑1 (MQ=255)
                                                                                                                                                                                                                                              tttAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTCTCCATGACGTCCACTTCTGCCGACGGTTCGTTAAAGGGGACGTAGGAAGGACGGACGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGc                                  >  2:392818/1‑289 (MQ=255)
                                                                                                                                                                                                                                               ttAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCa                                 <  1:994410/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   aCTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGaa                             >  2:1748887/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   aCTGTTTGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGaa                             >  2:1405024/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       tttGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCCGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAACTCTTCCTCAAAGAAGTTACGCAGGAAGTCg                         >  2:1538047/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       tttGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAAc                                                                                        <  1:776160/226‑1 (MQ=255)
                                                                                                                                                                                                                                                       tttGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAgg                               >  2:489393/1‑283 (MQ=255)
                                                                                                                                                                                                                                                       tttGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCG‑TTTTACCCATGACGTc                                                                                                                 >  2:491632/1‑200 (MQ=255)
                                                                                                                                                                                                                                                       tttGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCG‑TTTTACCCATGACGTc                                                                                                                 <  1:491632/200‑1 (MQ=255)
                                                                                                                                                                                                                                                       ttggAGGAAACGAAGATCGTTTTCGAAGAATCAACGCAGGGCGGTAACGCCGTAACGCTACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACGCCCGTGTCGATTCCAACGTTACGCAACACGTTCGGATGCACTATCCCGCAGCCCCGCACTTCCAGCCATTCACCGTTTTTACCCATGACGTCCACTTCAGCAGAAGGCTCGTTAACCGGTCAGTAGGAAGAAAGAAAGGGAACCAGCAAATGATCCTCAAAGGAGTTACGCaaaaaatct                         >  2:1058726/4‑281 (MQ=255)
                                                                                                                                                                                                                                                       ttgaaGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGTTCGGTGACGCCATAACGCAACATAGTCAGACGCACCATCCCCAGCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCACCGTTACCCAACTCGTTCGGACGCACCATACCGCAGCCCAGCACTTACTGCCATCTACCATTATTACCCATGACGTCCACTTCTGTCGAAGGTTCGGTAAACGTGAATTAGGAAGGACGGAAGCGAATCTGCAAATCTGCCTCACAGAAGTTAAGCAGGAAGTCg                         >  2:1079438/5‑289 (MQ=255)
                                                                                                                                                                                                                                                        ttGAGGAAACGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCg                         <  1:1563318/288‑1 (MQ=255)
                                                                                                                                                                                                                                                            ggAAACGCAGATCGTTTTCGAAGAATAAACGCAGGTCGGGCAAGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCa                     <  2:33308/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                aCGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCAGCGTg                <  1:782975/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAAc                                                                                        >  1:266969/1‑216 (MQ=255)
                                                                                                                                                                                                                                                                 cGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAAc                                                                                        <  2:266969/216‑1 (MQ=255)
                                                                                                                                                                                                                                                                 cGCAGATCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCAGCGTg                >  1:93783/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       tCGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCAGCGTGCCttt           <  1:145700/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cGTTTTCGAAGAATGAACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCAGCGTGCCTTTCAg        <  1:1748887/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              cGAAGAATGAACGAAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCAGCGTGCCTTTCAGGTTGGt  <  1:1058726/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                       
AGGCGATCGCCGCCGACATTCACTTTTGTCACACGCAGTTTGTCAGCGTTCGGATGCTGCGCACACTCAACCACTTCACCAACGACCACGCCGTGGAAGCTGCCGGCAACCGGTTCTACACCGTCAACTTCCAGGCCCGCCATAGTGATTTGATTTGCCAGCGCATCGCTATCAATCGCCGGGTTCACCCATTCGCGTAACCACAGTTCACTGAATTTCATAATCTATTCCTGCCTTATTTAAACTGTTTGAGGAAACGCAGATCGTTTTCGAAGAAACTACGCAGGTCGGTGACGCCGTAACGCAACATAGTCAGACGCTCCATCCCCATCCCGAAGGCGAAACCAGAGTAAACTTCCGGGTCGATGCCAACGTTACGCAACACGTTCGGATGCACCATCCCGCAGCCCAGCACTTCCAGCCATTTACCGTTTTTACCCATGACGTCCACTTCTGCAGAAGGTTCGGTAAACGGGAAGTAGGAAGGACGGAAGCGAATCTGCAAATCTTCCTCAAAGAAGTTACGCAGGAAGTCGTGCAGCGTGCCTTTCAGGTTGGT  >  CP042583/1479675‑1480233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A