Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,644,439 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,644,4390GC99.3% 661.7 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (139/142);  minor base A (1/1);  total (140/144)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,644,4400CG99.3% 669.0 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (138/144);  minor base A (2/0);  total (140/144)
Fisher's exact test for biased strand distribution p-value = 2.42e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,644,4410TA100.0% 678.0 / NA 284intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (140/144);  total (140/144)

Only 100 of 284 total aligned reads displayed.

GATTAACCGCTCTTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGGCTCATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCGCTC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGGCTAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGGCTCGTTGGTGCAATCTGGG  >  CP042583/1644160‑1644716
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
 aTTAACCGCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAaagaacaa                                                                                                                                                                                                                                                                              >  1:403829/1‑289 (MQ=255)
        gCTCCTACGGAAGCGTTGGAAAGGTAACAACTTTAGCGTGCTGCTGGCTGTCCGCGCGTCGCGGAACTCTCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGcc                                                                                                                                                                                                                                                                       <  2:1830355/289‑1 (MQ=255)
        gCTCCTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGCTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGACCCAGCGCAGCTGCAACTTCGTCACGCTCGTAGGGGTTAACAATTAACGCCGAC‑GTGAACTCGTTTGCTGCCCCCGCAAATTGCAAAAGAACAAGAACGc                                                                                                                                                                                                                                                                        >  2:1715164/1‑288 (MQ=255)
          tcctACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCg                                                                                                                                                                                                                                                                     >  2:217578/4‑289 (MQ=255)
             tACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGAt                                                                                                                                                                                                                                                                  <  1:1763624/289‑1 (MQ=255)
                  aaGTTTGGGAAAGGTAGCTCCTGTGTCGGGCTGTTGCCTTCCCGGGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCt                                                                                                                                                                                                                                                             <  2:415039/289‑1 (MQ=255)
                    gCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTgg                                                                                                                                                                                                                                                           >  2:1354220/1‑289 (MQ=255)
                    gCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTgg                                                                                                                                                                                                                                                           >  1:1925002/1‑289 (MQ=255)
                    gCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTgg                                                                                                                                                                                                                                                           >  1:254929/1‑289 (MQ=255)
                      tttGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAACGAACACGAACGCCCGGATTGGCTggg                                                                                                                                                                                                                                                          >  2:579800/1‑288 (MQ=255)
                       ttgtaaggttAGCAACTTGACCGCCCTGCTGGCTTTCCGCGCTTCGAGAAACTATCTCCTTTAGGTCGCTAATGAAGCACTCCTGCCGGTGTTTAATATTGTTTATCACGATAACATCCAGCTTTTCTGCCTGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTc                                                                                                                                                                                                                                                        <  2:853109/280‑1 (MQ=255)
                        tGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTc                                                                                                                                                                                                                                                        >  2:1300766/1‑288 (MQ=255)
                            aaGGTGGCAACTGTATCGCGCTGCTGGCGTTCCGCGTTTCGCTGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGag                                                                                                                                                                                                                                                   <  2:538771/289‑1 (MQ=255)
                                 aGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGagcagc                                                                                                                                                                                                                                               <  1:433485/288‑1 (MQ=255)
                                       tttATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATAc                                                                                                                                                                                                                                        <  1:423453/289‑1 (MQ=255)
                                         tATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATAct                                                                                                                                                                                                                                       >  2:1027038/1‑288 (MQ=255)
                                             gcgcGGCTGGCTTTCCGCGCTTCGCGGAACTATCGGGTGTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTGTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAAGGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCttt                                                                                                                                                                                                                                   <  2:731999/288‑1 (MQ=255)
                                               gcgactgTCTTTCCGCGCTTCGCGTAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGTTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTg                                                                                                                                                                                                                                 <  1:844508/284‑1 (MQ=255)
                                                          tCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCa                                                                                                                                                                                                                     <  2:1162743/289‑1 (MQ=255)
                                                               gcTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCg                                                                                                                                                                                                                <  1:1027038/289‑1 (MQ=255)
                                                                          cTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGC‑TGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGc                                                                                                                                                                                                   <  1:1459473/289‑1 (MQ=255)
                                                                             tCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCa                                                                                                                                                                                                        <  1:873691/282‑1 (MQ=255)
                                                                                  tttAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCACGGATTGGCCGGGTCCTGAGCAGCAACATACTCTTTTTCTCACAGGTTCATCCCGTCAC‑GCATTGGCATcccca                                                                                                                                                                                            >  2:1626785/1‑285 (MQ=255)
                                                                                       gTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGGTGCTTCACTAAccc                                                                                                                                                                                        >  2:744315/1‑288 (MQ=255)
                                                                                        tCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGcc                                                                                                                                                                                        <  1:992944/287‑1 (MQ=255)
                                                                                        tCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGcc                                                                                                                                                                                        <  1:1007259/287‑1 (MQ=255)
                                                                                        tCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGcc                                                                                                                                                                                        <  1:290985/287‑1 (MQ=255)
                                                                                        tCGCTAATGAAGACCGCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGcc                                                                                                                                                                                        <  2:69007/287‑1 (MQ=255)
                                                                                           cTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACg                                                                                                                                                                                                                                                                         >  1:939194/1‑204 (MQ=255)
                                                                                           cTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACg                                                                                                                                                                                    >  1:582244/1‑288 (MQ=255)
                                                                                           cTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACg                                                                                                                                                                                    >  1:1174369/1‑288 (MQ=255)
                                                                                           cTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCGGAGCAGCAACATACCCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCACGACTAAGCCCACg                                                                                                                                                                                    >  2:897208/1‑288 (MQ=255)
                                                                                                 aaGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAaagaacaag                                                                                                                                                                                                                                                                             >  1:531478/1‑194 (MQ=255)
                                                                                                    cACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGc                                                                                                                                                                          >  2:610914/1‑289 (MQ=255)
                                                                                                            ccAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGtt                                                                                                                                                                                                                       >  2:529513/1‑237 (MQ=255)
                                                                                                                 ggTTAATATCGTTTTTCCCGATAACGTCCAGCATTTCTGCATGCCGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTtcat                                                                                                                                                             <  1:1364065/289‑1 (MQ=255)
                                                                                                                 ggTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTtcat                                                                                                                                                             <  1:1559152/289‑1 (MQ=255)
                                                                                                                 ggTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTtca                                                                                                                                                              >  2:1471154/1‑288 (MQ=255)
                                                                                                                          cGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAaagaacaag                                                                                                                                                                                                                                                                             >  1:389979/1‑169 (MQ=255)
                                                                                                                          cGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAaagaacaag                                                                                                                                                                                                                                                                             <  2:389979/169‑1 (MQ=255)
                                                                                                                          cGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCCGAGTAGCGGAATCTTTTCATCAGTAAttt                                                                                                                                                    >  1:643820/1‑289 (MQ=255)
                                                                                                                            tttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACTCCCGGATTCGCTGGGTCCTGAGCAGCAACATACCATTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCGCACTTCAGAATATCGGACTATTTTCATCAGGACTTTAc                                                                                                                                                  >  2:273555/1‑289 (MQ=255)
                                                                                                                             ttttCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTAc                                                                                                                                                  <  1:507766/288‑1 (MQ=255)
                                                                                                                                 cccGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCa                                                                                                                                             <  1:1620421/287‑1 (MQ=255)
                                                                                                                                         cGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTg                                                                                                                                     >  1:1076999/1‑289 (MQ=255)
                                                                                                                                            ccAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGAt                                                                                                                                   >  2:1117745/1‑288 (MQ=255)
                                                                                                                                                 aTTTCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCaaa                                                                                                                              <  1:1117745/288‑1 (MQ=255)
                                                                                                                                                    tCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAaataat                                                                                                                          >  1:1430597/1‑289 (MQ=255)
                                                                                                                                                    tCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAaataat                                                                                                                          >  1:1871253/1‑289 (MQ=255)
                                                                                                                                                    tCTGCATGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAaataat                                                                                                                          >  1:159827/1‑289 (MQ=255)
                                                                                                                                                          tGACGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAgcg                                                                                                                    <  1:743362/289‑1 (MQ=255)
                                                                                                                                                             cGGGAAATACGTTCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAgcggcg                                                                                                                 >  2:128704/1‑289 (MQ=255)
                                                                                                                                                                         tCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCa                                                                                                                                                                                                                     <  1:631825/178‑1 (MQ=255)
                                                                                                                                                                         tCCGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGAt                                                                                                                                   <  2:1949292/259‑1 (MQ=255)
                                                                                                                                                                          ccGCCAGCGACATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAAtt                                                                                                     >  1:1375791/1‑288 (MQ=255)
                                                                                                                                                                           cgccagcgacATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATg                                                                                                                                        >  2:1781425/10‑252 (MQ=255)
                                                                                                                                                                           cgccagcgacATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTg                                                                                                    >  1:491276/10‑288 (MQ=255)
                                                                                                                                                                            gccagcgacATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGcc                                                                                                  <  1:1734492/281‑1 (MQ=255)
                                                                                                                                                                                  gacATAGTCAATGCACGGTCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTAACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTAAGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTAtt                                                                                            <  1:335601/287‑1 (MQ=255)
                                                                                                                                                                                  gacATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTAtt                                                                                            <  1:1471154/287‑1 (MQ=255)
                                                                                                                                                                                             tGCACGACCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTGAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATGTTAGTTGTGCGTCCAGCCTAATTGCCCGTATTTACCATTAAtt                                                                                 >  1:1511240/1‑289 (MQ=255)
                                                                                                                                                                                              gCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGATCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTc                                                                                >  2:1754683/1‑289 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCACATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCACGTAAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAACTGCTGATTCAAATAATAAAGCCGCGTCCAGCATAAATGCTCGTATTTATAATTAATTCGTTCGGCtttcttgtc                                                                >  2:1646409/1‑282 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGc                                                                                                                                                                                                   <  2:1258550/158‑1 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCGACGTTAGAGTAGCGGCATATTCTCAACAGTAATTATAGTTAAAAATGATGATTCAAATAATAAAGCGGCGTCAAGCCTAATTGCCCGTCTTTACCGTTAATTCGTCACGCTTAGtttt                                                                 >  2:100558/1‑288 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTAtt                                                                                            >  2:514855/1‑261 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTAtt                                                                                            <  1:514855/261‑1 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTc                                                                >  1:1344258/1‑289 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTc                                                                >  1:1665013/1‑289 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTc                                                                >  1:481586/1‑289 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTc                                                                >  2:362293/1‑289 (MQ=255)
                                                                                                                                                                                                              cTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCACGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCGGATTCAAATACTAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTACAttt                                                                  >  2:552860/1‑287 (MQ=255)
                                                                                                                                                                                                                  aaCTTCGTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAg                                                             <  2:1062960/288‑1 (MQ=255)
                                                                                                                                                                                                                        gTCACGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGc                                                                                                                                                                                                   >  1:20045/1‑148 (MQ=255)
                                                                                                                                                                                                                           aCGATCGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGa                                                   <  2:1558861/289‑1 (MQ=255)
                                                                                                                                                                                                                                cGTAGGGGTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCATTGGCGTCACTAAGCCCACGTCAGAGTAGCGGCATATTTTCATCAGTAATTTACGGTCAATATGCTGATTCAAATAATAAAGCGGCTTCCAGACCAATTGCCAGTATTTACCATTAACTCGTCCAGCTTCATTTTCGTGATGATGACGAatct                                               >  2:104077/1‑286 (MQ=255)
                                                                                                                                                                                                                                     gggTTAACAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAACTTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGa                                          <  2:640996/288‑1 (MQ=255)
                                                                                                                                                                                                                                         tcaCAATTAACGCCTAC‑GCTAAATCGATAGCGGCTCCCCGAAATTTAAAAAGAACAAGAACGCCCGGATTGGATGTGTTCTGATCAGCACCATACTCTATTGCAACAAGAGTAGTCCAG‑CACTGCAGTGGCGTCACTGAGCTCATGTCAGACACCCGGCACATATACATATGTGATTTTGCGGAAAAATGCTGAATCAAATACTAAAGCGGCGTCCATCCTAATTGCAAGTATTTACCATTAATTCGTCCAGCTTCATTTTCGACCTGAATCAGTATATCCTGAtcg                                       >  2:1511112/3‑285 (MQ=255)
                                                                                                                                                                                                                                          aaCAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCt                                    >  1:1281457/1‑289 (MQ=255)
                                                                                                                                                                                                                                          aaCAATTAACGCCGAC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCt                                    >  1:1948216/1‑289 (MQ=255)
                                                                                                                                                                                                                                                taacgccgac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGcaca                              <  2:1076999/280‑1 (MQ=255)
                                                                                                                                                                                                                                                 taaccgcTCGGTTAACTCGTTTGCCGGTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGAGTGGCTGGGTCCTGAGCGGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGcaca                              <  2:297483/285‑1 (MQ=255)
                                                                                                                                                                                                                                                 aacgccgac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACg                                                    <  1:716318/258‑1 (MQ=255)
                                                                                                                                                                                                                                                 aacgccgac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACg                                                    >  1:1638762/9‑266 (MQ=255)
                                                                                                                                                                                                                                                 aacgccgac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGcaca                              >  2:1413204/9‑288 (MQ=255)
                                                                                                                                                                                                                                                 aacgccgac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACAt                             <  2:967151/281‑1 (MQ=255)
                                                                                                                                                                                                                                                 aacgccgac‑GTTAACTCGTGTGCCGCTCCCGCAACTTGCGAACGAACAAGAACGCCAGGATTGGCGAGGTCCTGAGCAGCACCATACTCTTGTGCTACCAGGCTCATCCAGTCGC‑GTAGTGGCGGCACTAAGCCCACGTCAGAGTAGCGGAATACTTCCCTCAGTAATTTACGGTCAAAGTGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTCCCCGAATCTACCATTAATGCGTCCAGCTTCGTTTTCGAGCAGACGACGAATATCCGGATATGATCGcaca                              >  2:133104/9‑288 (MQ=255)
                                                                                                                                                                                                                                                  acgccgac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATc                            <  2:1875443/282‑1 (MQ=255)
                                                                                                                                                                                                                                                      cgac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGAGTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATcacc                         >  1:728864/4‑288 (MQ=255)
                                                                                                                                                                                                                                                       gac‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATcacca                        >  2:938893/3‑288 (MQ=255)
                                                                                                                                                                                                                                                         c‑GTTCAATCGTTTGCCGCTCCAGCAAATTGCGAAAGAACAAGAACGCCCGGATGTGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACg                      <  2:1810927/288‑1 (MQ=255)
                                                                                                                                                                                                                                                         c‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACg                      <  1:14041/288‑1 (MQ=255)
                                                                                                                                                                                                                                                         c‑GTTAACTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTATCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACg                      >  2:1637049/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              aaCTCGTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACgcgacg                 <  1:181548/289‑6 (MQ=255)
                                                                                                                                                                                                                                                                   gTTTGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGt            <  1:1257641/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tttGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGt            <  2:1174369/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tttGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTg           <  2:725501/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     ttGCCGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGc          <  1:128704/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         cGCTCCCGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGCGACGTTGGTGCAAt       <  2:495264/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             cccGCAAATTGCGAAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTACTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTACGCCCACGTCAGAGTAGCGGACTATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGACGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGAGGACGAATATCCTGAAAGGCTTGCACATCACCACGCGACGTTGTGGCAATCTggg  >  2:1365995/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
GATTAACCGCTCTTACGCAAGCTTTGGAAAGGTAGCAACTTTATCGCGCTGCTGGCTTTCCGCGCTTCGCGGAACTATCTGCTTTAGGTCGCTAATGAAGCACTCCTGCCAGTGGTTAATATCGTTTTTCACGATAACGTCCAGCATTTCTGCATGACGGGAAATACGTTCCGCCAGGCTCATAGTCAATGCACGATCCAGCGCAGCTGCAACTTCGTCACGATCGTAGGGGTTAACAATTAACGCGCTC‑GTTAACTCGTTTGCCGCTCCCGCAAATTGGCTAAGAACAAGAACGCCCGGATTGGCTGGGTCCTGAGCAGCAACATACTCTTTTGCTACCAGGTTCATCCCGTCAC‑GCAGTGGCGTCACTAAGCCCACGTCAGAGTAGCGGAATATTTTCATCAGTAATTTACGGTCAAAATGCTGATTCAAATAATAAAGCGGCGTCCAGCCTAATTGCCCGTATTTACCATTAATTCGTCCAGCTTCATTTTCGAGCTGATGACGAATATCCTGATAGGCTTGCACATCACCACGGCTCGTTGGTGCAATCTGGG  >  CP042583/1644160‑1644716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A