Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,669,271 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,669,271 | 0 | G | C | 99.6%
| 593.1
/ NA
| 254 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (127/125); minor base T (1/0); total (128/126) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
| * | CP042583 | 1,669,272 | 0 | C | G | 99.6%
| 595.5
/ NA
| 254 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (128/125); minor base T (0/1); total (128/126) |
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,669,273 | 0 | T | A | 98.8%
| 584.2
/ NA
| 254 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (124/125); minor base C (3/0); total (128/126) |
| Fisher's exact test for biased strand distribution p-value = 2.47e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 254 total aligned reads displayed.
ACCCACCAGCACGATGCGTTCACGGTGCTGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGGCTGTTCTTTTTGCTTACGCCAGCCAGGCTAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATGCTTTCAAAACCGCGACGGAT > CP042583/1668992‑1669546
|||
tGCGTTTCCGGTGTTGCGGCTGTAAAAGTTTTGCGTCGATGATTTCACGATCGTCTGGCCCATTATCTTCTTCATCCGCCACGTCATAGCCCAGTTCGTCCCGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACgccag < 2:839812/288‑1 (MQ=255)
tGCGTTCACGGTGCTGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGACCGTTTTACCCTGGTCGTCACTCTTCAGGTTTTTGACGTTTTCGAGCACAAACATAGCCGGACGACGCCCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCACTGGGGATCCCAGGCAAACCCAGGCGCCCGACCGAGCGAGTGCTTTCTCCTTAcccaag > 2:1719059/1‑283 (MQ=255)
tCACGGTGCTGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGccagccagcg > 1:660822/1‑287 (MQ=255)
cGGGGCTGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGccagccagcgaaa < 2:391639/289‑6 (MQ=255)
gTGCTGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGccagccagcgaaaat > 1:36869/1‑282 (MQ=255)
gctgcGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGccagccagcgaaaatg < 1:1297301/288‑9 (MQ=255)
tgcGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGTCGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAACCCGTGCCCCCGCCCGAACGCGTTCTTTTTCGATACGCCAGCCAGCGCAA‑ATGGc > 2:544039/1‑288 (MQ=255)
cAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACa > 2:583097/1‑288 (MQ=255)
gAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAgg > 1:714456/1‑289 (MQ=255)
gAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAgg > 1:902812/1‑289 (MQ=255)
gAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAgg > 1:242887/1‑289 (MQ=255)
gAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGCTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAgg > 2:411255/1‑289 (MQ=255)
ttGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGCAA‑ATGGCCGACAAGGGAAACCgg > 2:404976/1‑289 (MQ=255)
tGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGc < 1:1342366/289‑1 (MQ=255)
tGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGc < 2:749981/289‑1 (MQ=255)
ttttCGGGTCGTCTGGCCCATTATCTTCTGCATCAGCCACGGCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTCACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATc < 2:1279918/289‑1 (MQ=255)
ttttCGGAGCGTCTGGCCAATTAGCTTATGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATc < 1:417184/289‑1 (MQ=255)
ggATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGtt < 1:488436/289‑1 (MQ=255)
tCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGaa > 1:1521054/1‑289 (MQ=255)
cccATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAt‑gtg < 1:677071/288‑1 (MQ=255)
aTTATCTTCTGCATCAGCCACGTCATAGCCCAGGTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGa < 1:858907/289‑1 (MQ=255)
ttATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCCGCCAAA‑CTGGCTGACAAGGGAAACCGGCCGAGAACACATCTGGGTCAGGAAT‑GTGGTGAc > 2:1569236/1‑289 (MQ=255)
tATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑CTGGCTGACAAGGGAAACCGGCCAGTACAACATCGTGTTCAGGAAT‑GTGGTGaag > 2:1365205/1‑287 (MQ=255)
tATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCCGCCAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGACT‑GGGTTGACg > 2:559684/1‑289 (MQ=255)
tATCTTCTGCATCAGCCACGTCATAGCCCAGCTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCACGAGCGACTTCTTTTTCGATACG‑CAGCCCAGCGAAGCTGGCTGACAAGGGAAACCGGCCAGTAACACATCATGCTCAGGagcggtgtgacg > 2:1855015/1‑278 (MQ=255)
tctGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCACCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAC‑CGGGCTGACCAGGGACACCGGCCCGTGAAACTACGCATTCCGGAATGGTGTGCACGAatg > 2:904839/1‑288 (MQ=255)
tGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGc > 2:1012349/1‑249 (MQ=255)
tGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGc < 1:1012349/249‑1 (MQ=255)
tGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGt > 1:74492/1‑289 (MQ=255)
cATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCTCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTTACCAGGGAAACCGGCCAGTAAAACATCGTATTCAGGAAT‑GTGTTTACGAAGATGtt > 2:1317432/1‑288 (MQ=255)
cATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGCAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGATGAGGAAT‑GTGTTGAAGAACATGtt > 2:1195890/1‑288 (MQ=255)
gCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTccgcc > 1:1938090/1‑288 (MQ=255)
aTAGCCCATTTCGTCCATGGTCTGCAGGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGGTTTTGACGTGTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGGGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCtca < 2:36869/289‑1 (MQ=255)
aGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGCAA‑ATGGCCGACAAGGGAAACCGGCCAGTAAAACATCGAGTTCAGGAAT‑GTGTTGACGAATATGGTCCGCAGCCGCCtcat > 2:1893660/1‑288 (MQ=255)
aGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGTGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGGTGACGAATATGTTCCGCCCCCGCCTCAacactc > 2:234148/1‑288 (MQ=255)
gTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTTCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GAGTTGACGAATATGTTCCGCCGCCGCCTCAccactcc > 2:648268/1‑287 (MQ=255)
ttCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGGGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCAtcactcac > 1:1767671/1‑288 (MQ=255)
ttCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCCGCCAGCGAAC‑ATGGCTGACAAGGTAAACCGGCCAGTAAAACATGGTGTTCAGGCAT‑GTGTTGCAGAACATGTTCCGCCGCCGCCCCAccactcac > 2:110955/1‑288 (MQ=255)
ttCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTccgccgc < 1:350060/273‑1 (MQ=255)
ttCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCAtcactcac > 1:1797865/1‑288 (MQ=255)
tCGGCCATCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCAtcactca < 1:913132/286‑1 (MQ=255)
cgcccaccgttggCATGATGTGGCGGACCGGTTTACCCTGGTCTGGACTTTTCAGGTGTTTGCCGTTTTCGAGCCCAAACATCGCCGGCCGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGGGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGcc < 2:1237547/277‑1 (MQ=255)
cGTCCAGCGTTTGCATGATGGTGCGGAACGTTTTACCCTGGTCGGGACGTTTCAGGTTTTTGACGTTTTCCAGCACAAACATCGCCGGACGACGCGGGTCAATAATGCGTACAACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGGCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGcc < 2:1767671/289‑1 (MQ=255)
cGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGcc < 2:902812/289‑1 (MQ=255)
cGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGcc < 1:324896/289‑1 (MQ=255)
ccAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACAACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCct > 1:1583763/1‑287 (MQ=255)
ggTCTGCATGATGATGCTGAACGTTTTACCCGTGTCGTACCTTTTCAGGTTTTTGACGTTTTCGACCACAACCATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCATGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCttt < 2:202614/287‑1 (MQ=255)
gTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTa < 1:1117837/288‑1 (MQ=255)
cTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATgg < 1:436127/289‑1 (MQ=255)
gCATGATGATGCGTAACGTTTTACCCTGTTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCt < 1:1495191/289‑1 (MQ=255)
gCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCt < 1:835014/289‑1 (MQ=255)
gatgCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCt < 1:1653321/282‑1 (MQ=255)
gatgCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCt > 2:1653321/1‑282 (MQ=255)
ggAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGt < 1:1099210/288‑1 (MQ=255)
cGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGGCAAGGGAGACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATAGGTTCCGCCGCCGCCTCAACACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCgg > 1:778483/1‑289 (MQ=255)
cGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACCCACGCCTTCTTTATGGCTGAAGGTGATGTcgccg > 2:1269340/1‑287 (MQ=255)
tttACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGata > 1:564256/1‑289 (MQ=255)
ctgggtttGACTTTTCAGGGTTTTGACGTTTTCGAGGACAAACCACGCCGGACGACGCCCGTTGATAACGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCTATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGTCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGGGATGTCGCGGATATCTTCa < 1:928216/282‑1 (MQ=255)
tGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCAt < 1:219918/289‑1 (MQ=255)
ggTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCAtt > 2:1931895/1‑289 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTCAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTccgccgc > 2:1468478/1‑231 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTccgccgccg < 2:963769/233‑1 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTccgccgc < 1:1468478/231‑1 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTCTGGCTGAGGGTGATGTCGCGGCTATCTTCATTa > 1:1068380/1‑289 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTa > 1:1614069/1‑289 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACCCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTa > 1:957068/1‑289 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTCGACGAATATGTTCCGCCGCCGCCtca < 2:1149143/238‑1 (MQ=255)
gTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAG‑GTGTTGACGAATATGTTCCGCCGCCGCCTCAGCCCCCACGCCTTCTTTATTGCGTAGGGTGATGGCGCGGATAGCTTCAGTa > 2:1534200/1‑289 (MQ=255)
gACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAatg > 2:717746/1‑289 (MQ=255)
ttttCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGAGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAatgatg < 1:1170530/289‑1 (MQ=255)
ttCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTccgccg > 2:849931/1‑220 (MQ=255)
ttttGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCg < 1:1452390/288‑1 (MQ=255)
atgactgatacgggCACGAAAATCGCGAGACGACGCGCGTCGATACAGCGTCCCGCAGCAAAAGACAGCGTGCCCTGGTGATAGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGAt < 2:334/276‑1 (MQ=255)
tttCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCaata > 1:87495/1‑289 (MQ=255)
acaAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTgg < 2:488477/289‑1 (MQ=255)
aagaaCATCGCCGGACGCCGCGAGTCGATAATGCGTACCACAGCAAAGAAAAGCGGGCCCTGGGTATCGCAGGCAAAACCGTGGGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTgg < 2:1620413/286‑1 (MQ=255)
aaaCATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCA‑GCGAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGATGGTGATGTCGCGGCTATCTTCATTAAAATGAGTCGTCCCCGGAACGCAATCATGGTTGGCtt > 2:878200/1‑289 (MQ=255)
cATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTta < 1:544039/289‑1 (MQ=255)
acgacgGCCGTCGGTAATGCGTCCCACATCAAAAAACAGCGGGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGACTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCg < 2:207535/288‑1 (MQ=255)
acgacgCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATc < 2:1091480/147‑1 (MQ=255)
acgacgCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGTCTTTATAAGTGCg < 1:380370/288‑1 (MQ=255)
cgcgcgTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCg < 1:300369/289‑1 (MQ=255)
ccaacaTCCAAAAACAGCGTGACCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCg < 2:1818904/285‑1 (MQ=255)
cacaTCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTg > 1:590775/1‑289 (MQ=255)
acaTCAAAAAACAGCGGGCCCTGGGTATCGCAGACAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGACAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTgg < 1:1854117/289‑1 (MQ=255)
aacaagagagaGCGTGCACTGGGTATCGCAGGCAAACGCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑AGGGCTGAAAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTa < 2:267831/279‑1 (MQ=255)
aTCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTtata > 2:929914/1‑255 (MQ=255)
cAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATgg < 2:680969/242‑1 (MQ=255)
cGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGt > 2:788183/1‑233 (MQ=255)
gTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGt > 2:771944/1‑288 (MQ=255)
tGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACCAGCACTGTCCGCCaa > 1:1553939/1‑289 (MQ=255)
gggTATCGCAGGCAAACCCGGGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGACAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCCCGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAAt < 1:1214660/289‑1 (MQ=255)
ggTATCGCAGGCAAAACCGTGCGCCCGCCCGAGCTAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAAt < 2:287704/288‑1 (MQ=255)
cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGcc > 1:1718053/1‑148 (MQ=255)
cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATCAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAAtcgattc > 1:1928890/1‑283 (MQ=255)
cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAAtcgattc > 1:1949420/1‑283 (MQ=255)
cGCAGGCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAAtcgattc > 1:1358364/1‑283 (MQ=255)
gCAAAACCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCaaaa > 1:458430/1‑288 (MQ=255)
aaCCGTGCGCCCGCCCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGGTGGCTTTATAAGTGCGTACTGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCAAAACcgcg > 1:980771/1‑289 (MQ=255)
cgcccgccCGAGCGAGTTCTTTTTCGATACGCCAGCCAGCGAAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATCGATTCAAAACCGCGACGGAt > 1:1366615/1‑288 (MQ=255)
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ACCCACCAGCACGATGCGTTCACGGTGCTGCGGCAGAAAATGTTTGCCGTCGATGATTTTCGGATCGTCTGGCCCATTATCTTCTGCATCAGCCACGTCATAGCCCAGTTCGTCCAGCGTCTGCATGATGATGCGGAACGTTTTACCCTGGTCGTGACTTTTCAGGTTTTTGACGTTTTCGAGCACAAACATCGCCGGACGACGCGCGTCGATAATGCGTACCACATCAAAAAACAGCGTGCCCTGGGTATCGCAGGCAAAACCGTGCGCCCGCCCGAGGCTGTTCTTTTTGCTTACGCCAGCCAGGCTAA‑ATGGCTGACAAGGGAAACCGGCCAGTAAAACATCGTGTTCAGGAAT‑GTGTTGACGAATATGTTCCGCCGCCGCCTCATCACTCACGCCTTCTTTATGGCTGAGGGTGATGTCGCGGATATCTTCATTAAAATGATGCGTCGCCGGATCGCAATAATGGTTGGCTTTATAAGTGCGTACCGCATGTTTGTTCCATTCGCTGGTAAACACGCACTGTCCGCCAATGCTTTCAAAACCGCGACGGAT > CP042583/1668992‑1669546
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
