Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,608,860 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,608,8600GC99.6% 660.1 / NA 281intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (140/140);  minor base T (0/1);  total (140/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,608,8610CG99.6% 652.2 / NA 281intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (138/141);  total (140/141)
Fisher's exact test for biased strand distribution p-value = 4.96e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,608,8620TA99.6% 666.0 / NA 281intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (139/140);  minor base G (0/1);  total (140/141)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 281 total aligned reads displayed.

TCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTGCTGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGGCTTGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCGGGAAAGAAAATCTTCTGCCAGCGCCATAA  >  CP042583/1608582‑1609140
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
    tAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCTTGGCGGAATTAACTCTTCCCACTGTTGCTAAGCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATg                                                                                                                                                                                                                                                                            <  2:2702814/289‑1 (MQ=255)
     aaaCAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATg                                                                                                                                                                                                                                                                            <  1:911620/288‑1 (MQ=255)
       aCAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAg                                                                                                                                                                                                                                                                         <  1:328115/289‑1 (MQ=255)
          gCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCt                                                                                                                                                                                                                                                                      >  2:2489671/1‑289 (MQ=255)
          gCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAAGGACTACCAAGTGCTTCGAGGTCGTTTTATGCAGGcc                                                                                                                                                                                                                                                                      >  2:1355258/1‑288 (MQ=255)
           cGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCt                                                                                                                                                                                                                                                                      <  2:449255/288‑1 (MQ=255)
           cGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAAGGAATGACTACATAGTGCTTCTAGGTCGTTTTAGTCAGGCTg                                                                                                                                                                                                                                                                     >  2:929721/1‑289 (MQ=255)
            gTAAACCCTTCCGGCATGATGTTATCGCGTGGCGGAATTAACTCTTCCCCCTGTTGCTCATCACGCATACGGGTAAGGTATAAGCCAAAGGTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGc                                                                                                                                                                                                                                                                       <  2:1256742/286‑1 (MQ=255)
            gTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGc                                                                                                                                                                                                                                                                       <  1:1940678/286‑1 (MQ=255)
            gTAAACCATTCCGGCATGATGTTTTCGCGTGGCGGAATTAACGCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGc                                                                                                                                                                                                                                                                       <  2:2615402/286‑1 (MQ=255)
                aCCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTa                                                                                                                                                                                                                                                                >  1:1708918/1‑289 (MQ=255)
                     tCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATATGGCTTCGAGGTCGTTTGATGCAGGCTGACGTAAtgtg                                                                                                                                                                                                                                                           >  2:2304483/1‑286 (MQ=255)
                     tCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTg                                                                                                                                                                                                                                                                     >  1:1829767/1‑279 (MQ=255)
                       cacaatgatgTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTa                                                                                                                                                                                                                                                         <  1:397132/285‑1 (MQ=255)
                       cAGCGTTATGTTTCCGCGTGGGGGAATTAACTCTTCCCCCTTTGTCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTa                                                                                                                                                                                                                                                         <  2:34112/289‑1 (MQ=255)
                            tgatgTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGGGTCTCGAGTACGTTTTATGCAGGCGCACGTAATAGGTAACg                                                                                                                                                                                                                                                      >  2:2662295/1‑287 (MQ=255)
                            tgatgTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGGGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCCGGCGGACGTAATCGGTATCg                                                                                                                                                                                                                                                      >  2:2204169/1‑287 (MQ=255)
                                  tttCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCttttt                                                                                                                                                                                                                                               <  1:2710324/288‑1 (MQ=255)
                                   ttCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCAGTTCCGCGTCCAGCAGGCGAACTTCCCTGGTGGTCGCGCTGGCCAAATGAATGACTACACAGTGCGTCGAGGTCGGTTTTTGCAGGCTGACGTAATAGGATTCGCTTTTttct                                                                                                                                                                                                                                             >  2:2061816/1‑289 (MQ=255)
                                                       ctTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTg                                                                                                                                                                                                                         <  1:2491582/289‑1 (MQ=255)
                                                       ctTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTGGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTg                                                                                                                                                                                                                         <  2:1708918/289‑1 (MQ=255)
                                                         tCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTg                                                                                                                                                                                                                         >  1:2203505/1‑287 (MQ=255)
                                                          cccACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTgcga                                                                                                                                                                                                                      >  1:2161346/1‑286 (MQ=255)
                                                                gTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTgg                                                                                                                                                                                                                >  1:1165523/1‑289 (MQ=255)
                                                                    cTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATGGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGt                                                                                                                                                                                                             >  1:460614/1‑288 (MQ=255)
                                                                    cTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGt                                                                                                                                                                                                             >  1:2467655/1‑288 (MQ=255)
                                                                    cTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGAGCTTCGAGGTCGTTTTAGGCAGGCTGACGAACTAGGGATCGTCATTTTCTTCGTAGATCAGTTTATCGTGCGATGCTGgtgtg                                                                                                                                                                                                            >  2:1327821/1‑288 (MQ=255)
                                                                    cTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAACGACTACATAGTGCTTCGAGGTCGTTTGATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTgcgtatctggctt                                                                                                                                                                                                             >  2:1413539/1‑276 (MQ=255)
                                                                              gtgctggtcggttttaAGCCTAAGTTTTTGGCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGt                                                                                                                                                                                                  <  2:1869922/275‑1 (MQ=255)
                                                                              aTACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGt                                                                                                                                                                                                  <  1:1342430/289‑1 (MQ=255)
                                                                                   ggTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGa                                                                                                                                                                                                        >  1:2021834/1‑278 (MQ=255)
                                                                                   ggTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGa                                                                                                                                                                                                        <  2:2021834/278‑1 (MQ=255)
                                                                                   ggTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACg                                                                                                                                                                                              >  1:2522405/1‑288 (MQ=255)
                                                                                    gTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGc                                                                                                                                                                                             >  2:1513776/1‑288 (MQ=255)
                                                                                    gTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGGGCTTCGAGGTCGTTTTATGCAGGCTGACGTAACAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGTGTACCGATTGCGTGActc                                                                                                                                                                                             >  2:729093/1‑286 (MQ=255)
                                                                                      aCGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACGGGTGGGGGCGCCGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATTAGTTTATTTTCGTATGCTGGCGTACCGATGGTGTGATGcctg                                                                                                                                                                                          >  2:811350/1‑287 (MQ=255)
                                                                                       cGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCTGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGa                                                                                                                                                                                         <  1:1208643/289‑1 (MQ=255)
                                                                                       cGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGa                                                                                                                                                                                         <  1:2200076/289‑1 (MQ=255)
                                                                                       cGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGa                                                                                                                                                                                         <  1:1272232/289‑1 (MQ=255)
                                                                                        ggTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGAt                                                                                                                                                                                                       >  1:1040991/1‑274 (MQ=255)
                                                                                          tataAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCTGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATTGCGTTACGCCAGa                                                                                                                                                                                         >  2:1208643/1‑286 (MQ=255)
                                                                                          tataAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTa                                                                                                                                                                                                                                                         <  2:561539/222‑1 (MQ=255)
                                                                                          tataAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTATATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGa                                                                                                                                                                                         >  1:162111/1‑286 (MQ=255)
                                                                                            taAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAGCAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGa                                                                                                                                                                                    <  1:1393642/289‑1 (MQ=255)
                                                                                            taAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGa                                                                                                                                                                                    <  1:697729/289‑1 (MQ=255)
                                                                                             aaGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACACAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATAAGTTTATCTTGCGATGCTGGCGTACCGCTGGCGTGACGCCAGACATGAt                                                                                                                                                                                   >  2:2538264/1‑289 (MQ=255)
                                                                                              aGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCttttt                                                                                                                                                                                                                                               <  1:412718/228‑1 (MQ=255)
                                                                                              aGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCa                                                                                                                                                                                           >  1:801145/1‑280 (MQ=255)
                                                                                              aGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCCTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGa                                                                                                                                                                                    >  1:2229317/1‑287 (MQ=255)
                                                                                               gCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGAt                                                                                                                                                                                                       >  1:2303056/1‑267 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGc                                                                                                                                                                                                                                                                       >  1:2409337/1‑198 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATGGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACTCCAGACCTGATAAGgca                                                                                                                                                                             >  1:2573551/1‑288 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAg                                                                                                                                                                                                                                       >  1:762543/1‑230 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGTGTGACGCCAGACCTGATAAGgca                                                                                                                                                                             >  2:363753/1‑288 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGgca                                                                                                                                                                             >  2:1910677/1‑288 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTAGGTTTATGCAGGCTGACGTAATAGGTAGAGTCTTTTGCTGCGGAGATCAGTGTAGCGGGCGATGCTGGCTTACGGATGGCGTGACGGCAGACCTGATAAGgcag                                                                                                                                                                            >  1:1907481/1‑289 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGCCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGCTGCTGGCGTACCGATGGCGTTACGCCCGACCTGATAAGgca                                                                                                                                                                             >  2:2285840/1‑288 (MQ=255)
                                                                                                    aGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTCCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTa                                                                                                                                                                                                                                                         >  2:2183778/1‑212 (MQ=255)
                                                                                                         ttGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCg                                                                                                                                                                       <  1:2675134/289‑1 (MQ=255)
                                                                                                                              aGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACa                                                                                                                                                   <  1:958639/288‑1 (MQ=255)
                                                                                                                                  aaaaaCGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACAt                                                                                                                                                  <  2:2562009/285‑1 (MQ=255)
                                                                                                                                    aaaCGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGa                                                                                                                                            <  1:1865304/289‑1 (MQ=255)
                                                                                                                                                      tCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCAAGGAGTCAttt                                                                                                                           >  2:846654/1‑288 (MQ=255)
                                                                                                                                                       ccaGGGTGTCTGCGTGTACTTTGCGGCGCGGCCGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCGTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGc                                                                                                                         <  2:2233596/287‑1 (MQ=255)
                                                                                                                                                       cAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTg                                                                                                                          >  1:1319788/1‑288 (MQ=255)
                                                                                                                                                         aGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGc                                                                                                                                                                                                                                                                       >  2:1527817/1‑145 (MQ=255)
                                                                                                                                                           gCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGa                                                                                                                                            >  2:1007729/1‑266 (MQ=255)
                                                                                                                                                           gCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGa                                                                                                                                            <  1:1007729/266‑1 (MQ=255)
                                                                                                                                                               tATTCGTGCTCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCa                                                                                                                              <  1:1470020/276‑1 (MQ=255)
                                                                                                                                                               tATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAgg                                                                                                                                                                                                                                                                        >  2:2133498/1‑138 (MQ=255)
                                                                                                                                                               tATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGa                                                                                                                                                                                         >  1:2070067/1‑217 (MQ=255)
                                                                                                                                                               tATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGATCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGAAGCAGCGTCACCGGATGCTTGCGAACTTAGTAGACAATCCAGGAGTCATTTGCCCAGACaa                                                                                                                 >  1:194637/1‑289 (MQ=255)
                                                                                                                                                                aTTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACaaa                                                                                                                >  2:2390136/1‑289 (MQ=255)
                                                                                                                                                                   cGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCt                                                                                                             <  2:1165523/289‑1 (MQ=255)
                                                                                                                                                                    gTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTg                                                                                                            >  1:2273654/1‑289 (MQ=255)
                                                                                                                                                                         cgttGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCGGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGtt                                                                                                        <  1:2371340/286‑1 (MQ=255)
                                                                                                                                                                         cTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCGGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGtt                                                                                                        >  2:2371340/1‑288 (MQ=255)
                                                                                                                                                                         cTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTc                                                                                                       >  1:518833/1‑289 (MQ=255)
                                                                                                                                                                           ttGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCaa                                                                                                     <  1:2591793/289‑1 (MQ=255)
                                                                                                                                                                            tGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCg                                                                                                                                                                                                                                          >  1:844762/1‑155 (MQ=255)
                                                                                                                                                                            tGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAAc                                                                                                    >  1:562498/1‑289 (MQ=255)
                                                                                                                                                                              cggcgcggcAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGGGCTATTTGCCCAGACAAAGCTGGGTTCAACGt                                                                                                  >  2:131720/1‑289 (MQ=255)
                                                                                                                                                                                   cggcAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGc                                                                                                                                                        >  2:783055/1‑230 (MQ=255)
                                                                                                                                                                                                 acGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGta                                                                               <  1:1366215/289‑1 (MQ=255)
                                                                                                                                                                                                     cTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGtaccag                                                                           >  1:1582802/1‑289 (MQ=255)
                                                                                                                                                                                                                 cATTGCCGCGTGAAGGAGGCGAACTTATCTGGTGGTGGGGCTGGCCAAATGAATGACTACATAGTGCTTCGATGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGGTGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTc                                                                <  2:2454561/288‑1 (MQ=255)
                                                                                                                                                                                                                    ttCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGa                                                            <  2:2522405/289‑1 (MQ=255)
                                                                                                                                                                                                                          gTCCAGGAGGCGAACTTGACGGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGGTTCGAGGTCGGTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACg                                                       <  2:2689275/288‑1 (MQ=255)
                                                                                                                                                                                                                                 agGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGaa                                               <  2:685928/289‑1 (MQ=255)
                                                                                                                                                                                                                                        cTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTa                                        <  2:1582802/289‑1 (MQ=255)
                                                                                                                                                                                                                                             cTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAAGGCCGTACTGGc                                   >  2:197106/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    tggCGCTGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCggg                             <  1:1513776/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tGGCCAAATGAATGACTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTa                                                                                                >  1:1715567/1‑215 (MQ=255)
                                                                                                                                                                                                                                                                    aatgaCTACATAGTGCTTCGGGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCGGGAAAGAAAATCTTCTGcc            <  1:1259722/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tgaCTTCATAGTGCTTCGAGGTCTTTTACTGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCGGGAAAGAAAATCTTCTGCCAg          <  2:1801199/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      tgaCTACATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCGGGAAAGAAAATCTTCTGCCa           >  1:1960647/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            cATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTcc                                                                                    >  1:1120899/1‑209 (MQ=255)
                                                                                                                                                                                                                                                                            cATAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTcc                                                                                    <  2:1120899/209‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCCGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCGGGAAAGAAAATCTTCTGCCAGCGCCATaa  <  1:359380/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tAGTGCTTCGAGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGCGATGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCGGGAAAGAAAATCTTCTGCCAGCGCCATaa  >  2:1266275/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                      
TCGGTAAACAGCGTAAACCCTTCCAGCATGATGTTTTCGCGTGGCGGAATTAACTCTTCCCACTGTTGCTCATCACGCATACGGGTACGGTATAAGCCAAAGTTTTTGCCGTGGCGGTTGGAACGCAGATAAAAACGATGCTGGTAGTGATCAAGGCTGTATTCGTGATCTTTGCGGCGCGGCAGAAAAACAAACGGCTCGGCATCGGCCATTTCCGCGTCCAGCAGGCGAACTTCACTGGTGGTGGCGCTGGCCAAATGAATGACTACATAGTGCTTGCTGGTCGTTTTATGCAGGCTGACGTAATAGGTATCGTCTTTTTCTTCGTAGATCAGTTTATCTTGGCTTGCTGGCGTACCGATGGCGTGACGCCAGACCTGATAAGGCAGCAGCGTCACCGGATGCTTGCGAACATAGTAGAAAATCCAGGAGTCATTTGCCCAGACAAAGCTGGGTTCAACGTTATCCAGCAGTTCCGGGTACCAGTTACCAGTTTCCAGATTACGAAAACGAATGCCGTACTGGCGTCGGGAAAGAAAATCTTCTGCCAGCGCCATAA  >  CP042583/1608582‑1609140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A