Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F1 I2 R1 777 59.2 2955938 92.5% 2734242 106.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,789,913 C→T A57T (GCA→ACA)  waaH ← LPS(HepIII)‑glucuronic acid glycosyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,789,9130CT100.0% 222.9 / NA 70A57T (GCA→ACA) waaHLPS(HepIII)‑glucuronic acid glycosyltransferase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (35/35);  total (35/35)

ATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCGCATTATATAACG  >  NC_000913/3789777‑3790044
                                                                                                                                        |                                                                                                                                   
aTGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAATGTGCGGATAGTTTTCTgtgt                                                                                                                                   >  1:1312763/1‑139 (MQ=255)
 tggtggGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTa                                                                                                                                  <  2:654229/139‑1 (MQ=255)
  ggtggGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTaa                                                                                                                                 >  1:744222/1‑139 (MQ=255)
  ggtggGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTaa                                                                                                                                 >  1:1127795/1‑139 (MQ=255)
      ggATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACt                                                                                                                             >  2:1339352/1‑139 (MQ=255)
        aTAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACttt                                                                                                                           >  2:1110995/1‑139 (MQ=255)
            aCTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTa                                                                                                                       >  2:974801/1‑139 (MQ=255)
                cATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTc                                                                                                                   >  2:1433085/1‑139 (MQ=255)
                  tCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCaa                                                                                                                 <  1:1114725/139‑1 (MQ=255)
                     tCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAg                                                                                                              >  2:1135908/1‑139 (MQ=255)
                       aGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGaa                                                                                                            >  2:147559/1‑139 (MQ=255)
                       aGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGaa                                                                                                            <  2:744222/139‑1 (MQ=255)
                           tCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTAt                                                                                                        >  1:876016/1‑139 (MQ=255)
                              aCAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAATGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCg                                                                                                     <  2:1312763/139‑1 (MQ=255)
                              aCAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTAt                                                                                                                      <  1:916952/122‑1 (MQ=255)
                              aCAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATACGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTAt                                                                                                                      >  2:916952/1‑122 (MQ=255)
                                   aGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGaa                                                                                                <  1:687811/139‑1 (MQ=255)
                                      gACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCa                                                                                             <  1:1311555/139‑1 (MQ=255)
                                       aCATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTg                                                                                                                          <  2:519236/109‑1 (MQ=255)
                                       aCATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTg                                                                                                                          >  1:519236/1‑109 (MQ=255)
                                       aCATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCAt                                                                                            <  1:1110995/139‑1 (MQ=255)
                                           atTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCAATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGtt                                                                                        <  1:1135908/139‑1 (MQ=255)
                                                    ttGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTaataataat                                                                               >  1:213721/1‑139 (MQ=255)
                                                     tGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGaa                                                                                                <  2:1008172/121‑1 (MQ=255)
                                                     tGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGaa                                                                                                >  1:1008172/1‑121 (MQ=255)
                                                     tGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATg                                                                              >  2:124530/1‑139 (MQ=255)
                                                     tGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATg                                                                              <  1:974801/139‑1 (MQ=255)
                                                          cTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTc                                                                         >  1:773863/1‑139 (MQ=255)
                                                               aTCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    <  1:272046/139‑1 (MQ=255)
                                                               aTCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    <  2:773863/139‑1 (MQ=255)
                                                                   cACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGt                                                                >  2:339544/1‑139 (MQ=255)
                                                                        ttACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACttt                                                                                                                           >  2:283879/1‑75 (MQ=255)
                                                                        ttACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACttt                                                                                                                           <  1:283879/75‑1 (MQ=255)
                                                                        ttACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAgg                                                           >  2:1039080/1‑139 (MQ=255)
                                                                           cgcgCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACa                                                                                                               >  1:1011456/1‑84 (MQ=255)
                                                                           cgcgCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACa                                                                                                               <  2:1011456/84‑1 (MQ=255)
                                                                            gcgcCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTg                                                       <  1:1039080/139‑1 (MQ=255)
                                                                              gcCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCg                                                     <  2:876016/139‑1 (MQ=255)
                                                                                cACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCag                                                                      >  1:942573/1‑120 (MQ=255)
                                                                                cACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCag                                                                      <  2:942573/120‑1 (MQ=255)
                                                                                cACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTa                                                   >  2:1262459/1‑139 (MQ=255)
                                                                                  ccGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAAt                                                 >  1:814311/1‑139 (MQ=255)
                                                                                      tGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTaaa                                             <  2:814311/139‑1 (MQ=255)
                                                                                      tGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTaaa                                             <  1:1262459/139‑1 (MQ=255)
                                                                                        cgcCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGa                                           <  1:147559/139‑1 (MQ=255)
                                                                                               aTTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATa                                    <  2:213721/139‑1 (MQ=255)
                                                                                                        aTGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCa                                                                                             <  2:742449/73‑1 (MQ=255)
                                                                                                        aTGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCa                                                                                             >  1:742449/1‑73 (MQ=255)
                                                                                                        aTGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    >  1:409651/1‑98 (MQ=255)
                                                                                                        aTGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    >  2:1046118/1‑98 (MQ=255)
                                                                                                        aTGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    <  1:1046118/98‑1 (MQ=255)
                                                                                                        aTGCAACAAACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    <  2:409651/98‑1 (MQ=255)
                                                                                                             acaaACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    >  2:106771/1‑93 (MQ=255)
                                                                                                             acaaACGAACGTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCagag                                                                    <  1:106771/93‑1 (MQ=255)
                                                                                                                 acgaacgTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCg                  >  2:414093/1‑139 (MQ=255)
                                                                                                                  cgaacgTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATg                                                                              >  1:522314/1‑78 (MQ=255)
                                                                                                                  cgaacgTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATg                                                                              <  2:522314/78‑1 (MQ=255)
                                                                                                                     acgTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCg              >  2:599748/1‑139 (MQ=255)
                                                                                                                      cgTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCg              >  1:1124680/1‑138 (MQ=255)
                                                                                                                      cgTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCg              <  2:1124680/138‑1 (MQ=255)
                                                                                                                       gTGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCGCa            <  1:599748/139‑1 (MQ=255)
                                                                                                                        tGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCag                                                                      <  2:57313/80‑1 (MQ=255)
                                                                                                                        tGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCag                                                                      >  1:57313/1‑80 (MQ=255)
                                                                                                                        tGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCg              <  2:170366/136‑1 (MQ=255)
                                                                                                                        tGCGGATAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCg              >  1:170366/1‑136 (MQ=255)
                                                                                                                              tAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCg                                                     <  2:493175/91‑1 (MQ=255)
                                                                                                                              tAGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCg                                                     >  1:493175/1‑91 (MQ=255)
                                                                                                                               aGTTTTCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCGCATTATATaa    <  1:414093/139‑1 (MQ=255)
                                                                                                                                 ttttCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCGCATTATATAACg  >  1:1032528/1‑139 (MQ=255)
                                                                                                                                   ttCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCg              <  2:272169/125‑1 (MQ=255)
                                                                                                                                   ttCTGTGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCg              >  1:272169/1‑125 (MQ=255)
                                                                                                                                        |                                                                                                                                   
ATGGTGGGATAGACTTCATCGTCAGCATCGACAAAAGCGACATATTTGCCCGTTGCCACTTCAATCCCACGATTACGCGCCACCGATGCGCCAGCATTCGCCTGATGCAACAAACGAACGTGCGGATAGTTTTCTGCGTAATACTTTGCTATTTCAACAGAATTATCCGTTGAACCATCGTTAATAATAATGATTTCCAGAGCAGTCCAGGTTTGCGTAATTAAAGATTCCATACAAGTGCGGAAATCATCGCCCGCATTATATAACG  >  NC_000913/3789777‑3790044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A