Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A9 F1 I1 R1 759 71.0 3673240 91.5% 3361014 104.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 3,240,984 (G)7→10 coding (1041/1245 nt) sstT → sodium:serine/threonine symporter

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 32409772 (0.030)69 (0.980)
+GGG		 48/188 0.2 97.2% coding (1034/1245 nt) sstT sodium:serine/threonine symporter
?NC_000913 3240978 = 2 (0.030)coding (1035/1245 nt) sstT sodium:serine/threonine symporter

TATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3240840‑3240977
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTG  >  NC_000913/3240978‑3241104
                                                                                                                                          ||||                                                                                                                               
TATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGCTTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGGGCGTGGTGGCTTCTCGGGGTGCCGGTGGCGCAACCGGCGTGGC‑G                                                                                                                                   <  1:1156921/139‑1
   GGCGGGCGCAGCAATCACTATTACCGTGTTTACGCTGGCTGCGGTTAATACGGTGGGTATTCCGGTCGATCTGCCCCCGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGG                                                                                                                                >  1:1618639/1‑139
     CGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGG                                                                                                                              >  2:118632/1‑139
     CGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGG                                                                                                                              <  1:118632/139‑1
         CGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGG                                                                                                                          >  2:1439601/1‑139
           CAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTC                                                                                                                        >  2:561104/1‑139
                   ACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGC                                                                                                                >  1:1013251/1‑139
                        TACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATC                                                                                                           >  2:664636/1‑139
                          CCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGT                                                                                                                         >  2:256515/1‑123
                          CCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGGGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGT                                                                                                                         <  1:256515/123‑1
                           CGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        <  2:248503/139‑1
                           CGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        <  2:1013251/139‑1
                           CGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        <  2:1486997/139‑1
                           CGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        <  1:246857/139‑1
                           CGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCAC                                                                                                       >  1:699597/1‑139
                            GTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGGGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCAC                                                                                                       <  1:563089/139‑1
                             TGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACT                                                                                                      >  1:1777951/1‑139
                              GTTGACGCTGGCTGGGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGGTGTTGGGCGTGGTGGCTTCTCTGTGTGCCGGTGGCGCATCCGGCGTGGCGGGGGGGGGGGTCTCTGCTGCTGATCCCACT                                                                                                      <  1:1584308/139‑1
                               TTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGGGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGG                                                                                                    <  2:1799929/139‑1
                               TTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGG                                                                                                    >  2:1835483/1‑139
                               TTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGC                                                                                                   <  2:776962/139‑1
                                TGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGCGGGGGGGGGGGTCTCTGCTGCTGATCCCACTGG                                                                                                    <  2:1044954/139‑1
                                TGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGC                                                                                                   <  2:1777951/139‑1
                                         CTGCGGTTAATACGCTTGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATAT                                                                                          <  2:1448481/139‑1
                                         CTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATAT                                                                                          >  2:963068/1‑139
                                                  ATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTAT                                                                                 >  1:848622/1‑139
                                                         GGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTTTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        <  1:95814/109‑1
                                                         GGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        >  2:95814/1‑109
                                                         GGGTATTCCGGTCGATCAGCCCACGGCGCTGCTGTTGAGCGCCGTGGCTTCTATGTGTCCCTGTGGCGCATCCGGCGTGAC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTCTTTCAAACG                                                                         >  2:1042531/1‑139
                                                          GGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGA                                                                        <  2:699597/139‑1
                                                           GTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGA                                                                        >  1:1269943/1‑139
                                                             ATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATA                                                                      <  1:963068/139‑1
                                                                    TCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGC                                                                                                   <  2:23773/102‑1
                                                                    TCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGC                                                                                                   >  1:23773/1‑102
                                                                            CCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGG                                                       <  2:175921/139‑1
                                                                              CACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        <  1:597544/88‑1
                                                                              CACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        >  2:597544/1‑88
                                                                                 GGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCC                                                  <  1:664636/139‑1
                                                                                  gccgTGCTGTTGACCGTGGTGGCTTCTCTTTGAGCCTGTGGCGCATCCGGCGGGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAATGATATCGCCATGCAGGTGGTTGCCG                                                 <  1:631943/135‑1
                                                                                      TGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGG                                                                                                                               <  2:241449/57‑1
                                                                                      TGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGG                                                                                                                               >  1:241449/1‑57
                                                                                           TTGGGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        <  1:1261421/75‑1
                                                                                           TTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCA                                                                                                        >  2:1261421/1‑75
                                                                                             GAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCC                                                                 >  2:1598769/1‑112
                                                                                             GAGCGTGGGGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCC                                                                 <  1:1598769/112‑1
                                                                                                    GTGGCTTCTCTTTGGGCCTGGGGGGCATCCGGCGTGGG‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCG                               <  1:1835483/139‑1
                                                                                                      GGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCTGTCGGCTTTATCATCGGCGTA                             <  2:660680/139‑1
                                                                                                      GGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCATTGGCCTGTAATATGTTCGGTATTGCGAACGATATAGCCATGCAGGTGGTTGGCGTCGGGTTTATCACCGGCGTAT                            <  1:1042531/139‑1
                                                                                                        CTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATT                           >  2:1424221/1‑139
                                                                                                           CTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCA                        <  2:1618639/139‑1
                                                                                                              TGTGTGCCTGTGGCGCGTCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCG                               >  1:237802/1‑129
                                                                                                              TGTGTGCCTGTGGCGCGTCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCG                               <  2:237802/129‑1
                                                                                                                TGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGT                                                                                                                         >  2:1660038/1‑37
                                                                                                                TGTGCCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGT                                                                                                                         <  1:1660038/37‑1
                                                                                                                    CCTGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTG               <  2:1269943/139‑1
                                                                                                                    CCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGC              >  1:453984/1‑139
                                                                                                                    CCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCG                               <  2:1155186/122‑1
                                                                                                                    CCTGTGGCGCATCCGGCGTGGC‑‑GGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGATGCCGTCGGCTTTATCATCGGCG                               >  1:1155186/1‑122
                                                                                                                      TGTGGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCG             >  2:1739628/1‑139
                                                                                                                         GGCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAA          <  1:1428026/139‑1
                                                                                                                          GCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCCCTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAAC         >  1:817996/1‑139
                                                                                                                          GCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAAC         >  2:817312/1‑139
                                                                                                                          GCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCAT                                    >  2:248918/1‑112
                                                                                                                          GCGCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCAT                                    <  1:248918/112‑1
                                                                                                                            GCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCG                                                                             >  1:1525611/1‑69
                                                                                                                            GCATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCG                                                                             <  2:1525611/69‑1
                                                                                                                             CATCCGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGC      >  2:559031/1‑139
                                                                                                                              ATCCGGCGTGGC‑GGGGGGGTGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCG     <  2:190551/139‑1
                                                                                                                                 CGGCGTGGC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTG  <  1:1739628/139‑1
                                                                                                                                        GC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATAT                                                                                          <  1:1492433/44‑1
                                                                                                                                        GC‑GGGGGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATAT                                                                                          >  2:1492433/1‑44
                                                                                                                                          ||||                                                                                                                               
TATGGCGGGCGCAGCAATCACTATTACCGTGTTGACGCTGGCTGCGGTTAATACGCTGGGTATTCCGGTCGATCTGCCCACGGCGCTGCTGTTGAGCGTGGTGGCTTCTCTGTGTGCCTGTGGCGCATCCGGCGTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3240840‑3240977
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGGGGGGTCTCTGCTGCTGATCCCACTGGCCTGTAATATGTTCGGTATTTCGAACGATATCGCCATGCAGGTGGTTGCCGTCGGCTTTATCATCGGCGTATTGCAGGACTCTTGCGAAACCGCGCTG  >  NC_000913/3240978‑3241104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

N/A