Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A13 F48 I1 R1
|
62 |
147.6 |
5031800 |
99.1% |
4986513 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
634,400 |
C→A |
P272Q (CCG→CAG) |
ybdL → |
methionine‑oxo‑acid transaminase, PLP‑dependent |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 634,400 | 0 | C | A | 99.3%
| 520.0
/ ‑4.0
| 146 | P272Q (CCG→CAG) | ybdL | methionine‑oxo‑acid transaminase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base A (77/68); minor base T (1/0); total (78/68) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.80e-01 |
Only 100 of 150 total aligned reads displayed.
CGGGCAGTGGCGGTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCCGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGTGTGA > NC_000913/634264‑634535
|
cGGGCAGTGGCGGTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGc < 1:1780075/140‑1 (MQ=255)
gTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCt < 2:2382125/140‑1 (MQ=255)
gTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCt < 2:1401862/140‑1 (MQ=255)
gTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCt < 1:2259178/140‑1 (MQ=255)
ttcttcATTTGGCAAGTCCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTg < 1:341063/140‑1 (MQ=255)
ttcttcATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTg < 2:1199831/140‑1 (MQ=255)
ttGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGatatt > 2:1131093/1‑139 (MQ=255)
gCAAGACCTATCATATGACCTGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTa < 2:499115/140‑1 (MQ=255)
gCAAGACCTATCATATGACCGGCTGGAAAGAGGGTTATTGTGTTGCACCAGCGCCCATCAGCGCCGAAATTCGCAAGGAACATCAGTATCTGACTTTTTCGGTGAATACCCAGGCACAGCTGCGCCTTGCTGATATGCtc > 2:1994651/1‑139 (MQ=255)
aaGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACg < 1:1539824/140‑1 (MQ=255)
cTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAg < 1:2480017/140‑1 (MQ=255)
cTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAg < 2:1932330/140‑1 (MQ=255)
cTATCATATGAACGGCTGGAAAGTGGGTCATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCATGGTACTTCACTATCTACCAAATTCCGTGAATACCCAGGTACATCTGGCGCTTGCTGATATGCTACGTGCAg < 1:2365041/140‑1 (MQ=255)
tGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAg > 1:407912/1‑140 (MQ=255)
tGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAg > 1:1251795/1‑140 (MQ=255)
tGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAg > 1:1287757/1‑140 (MQ=255)
tGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGGACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGac > 2:726054/1‑139 (MQ=255)
gACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCt < 1:1816977/136‑1 (MQ=255)
gACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGc > 2:338435/1‑140 (MQ=255)
gACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGc > 1:2412694/1‑140 (MQ=255)
gACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGc < 1:1101424/140‑1 (MQ=255)
ccGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCAt > 2:480861/1‑140 (MQ=255)
ccGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCAt > 1:369592/1‑140 (MQ=255)
ccGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCAt > 2:1632233/1‑140 (MQ=255)
ggCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTa > 1:1947828/1‑140 (MQ=255)
ggCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTa > 2:2289393/1‑140 (MQ=255)
gCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCa > 2:791435/1‑125 (MQ=255)
gCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCa < 1:791435/125‑1 (MQ=255)
gCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTAt > 2:1127433/1‑140 (MQ=255)
gCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTAt > 1:518638/1‑140 (MQ=255)
gCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTAt > 2:820634/1‑140 (MQ=255)
gCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTAt > 2:2301519/1‑140 (MQ=255)
cTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATc > 2:2262214/1‑140 (MQ=255)
gAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTg < 1:1785838/140‑1 (MQ=255)
tGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTa < 1:820634/140‑1 (MQ=255)
gggTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGCCCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTAc < 1:261961/140‑1 (MQ=255)
gggTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTAc < 1:67108/140‑1 (MQ=255)
ggTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTAcc > 2:290767/1‑140 (MQ=255)
aTTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGAc > 2:1492277/1‑140 (MQ=255)
ttGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTAt > 1:1539181/1‑140 (MQ=255)
ttGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTAt > 2:1003897/1‑140 (MQ=255)
cgcCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGc > 2:2210929/1‑140 (MQ=255)
cgcCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGc > 2:191820/1‑140 (MQ=255)
gcCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGcc < 2:375076/140‑1 (MQ=255)
ccAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCa > 2:2354657/1‑140 (MQ=255)
gcgcCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGaa > 2:1755720/1‑140 (MQ=255)
gcgcCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGaa > 2:1081102/1‑140 (MQ=255)
gcgcCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGaa > 2:1380746/1‑140 (MQ=255)
gcgcCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGaa > 1:1224205/1‑140 (MQ=255)
gcgcCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGaa < 2:1525408/140‑1 (MQ=255)
cccATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAgcg < 2:1287757/140‑1 (MQ=255)
cccATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAgcg < 2:1434542/140‑1 (MQ=255)
ccATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAgcgc < 1:1003897/140‑1 (MQ=255)
cATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGcgcg < 1:482953/140‑1 (MQ=255)
cATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGcgcg < 2:2467072/140‑1 (MQ=255)
cATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGcgcg < 2:1141956/140‑1 (MQ=255)
cATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGcgcg < 2:518638/140‑1 (MQ=255)
cATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGcgcg < 1:1380746/140‑1 (MQ=255)
cATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGcgcg < 1:2301519/140‑1 (MQ=255)
aTCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGa > 1:1721628/1‑140 (MQ=255)
tCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGat < 1:2210929/140‑1 (MQ=255)
gcgcCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATAtt < 1:480861/140‑1 (MQ=255)
cgcCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTc > 1:1076811/1‑140 (MQ=255)
cgcCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTc > 2:369787/1‑140 (MQ=255)
aTTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGaa < 2:474972/140‑1 (MQ=255)
aTTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGaa < 1:2285675/140‑1 (MQ=255)
gTACATCAGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGCCTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTaaa < 1:1994651/140‑1 (MQ=255)
aGTATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGc < 1:369787/140‑1 (MQ=255)
tATCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCg > 1:311133/1‑140 (MQ=255)
aTCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCgg > 2:2037203/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCTGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:1477237/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGTTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:1931999/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:2324988/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:347204/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 2:1931083/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 2:605026/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 2:1740228/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:2461201/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:2178114/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:663271/1‑140 (MQ=255)
tCTGACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGc > 1:947523/1‑140 (MQ=255)
gACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGTAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGTGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTgg > 2:97893/1‑140 (MQ=255)
gACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTgg > 1:336282/1‑140 (MQ=255)
gACCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTgg > 1:1691541/1‑140 (MQ=255)
aCCTTTTCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGga > 1:994232/1‑140 (MQ=255)
tttCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGAtt < 2:1744676/140‑1 (MQ=255)
ttCGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGAttt > 2:129521/1‑140 (MQ=255)
cGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTa < 2:1947828/140‑1 (MQ=255)
cGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTa < 1:2074962/140‑1 (MQ=255)
cGGTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTAAAGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTa < 2:2178114/140‑1 (MQ=255)
ggTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTAc < 2:1327385/140‑1 (MQ=255)
gTGAATACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTAcc < 2:2324988/140‑1 (MQ=255)
aaTACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCgtt > 2:222403/1‑139 (MQ=255)
aaTACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCgtg > 1:943230/1‑140 (MQ=255)
aaTACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCgtg < 2:979827/140‑1 (MQ=255)
tACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGtgtg < 2:1224205/140‑1 (MQ=255)
tACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGtgtg < 1:191820/140‑1 (MQ=255)
tACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGtgtg < 1:129521/140‑1 (MQ=255)
tACCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGtgtg < 1:1131093/140‑1 (MQ=255)
aCCCAGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGTGTGa < 1:2354657/140‑1 (MQ=255)
|
CGGGCAGTGGCGGTTTCTTCATTTGGCAAGACCTATCATATGACCGGCTGGAAAGTGGGTTATTGTGTTGCGCCAGCGCCCATCAGCGCCGAAATTCGCAAGGTACATCAGTATCTGACCTTTTCGGTGAATACCCCGGCACAGCTGGCGCTTGCTGATATGCTACGTGCAGAACCTGAGCATTATCTTGCGTTACCGGACTTTTATCGCCAGAAGCGCGATATTCTGGTGAATGCTTTAAATGAAAGCCGGCTGGAGATTTTACCGTGTGA > NC_000913/634264‑634535
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
