Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	171,824	G→T	A121A (GCG→GCT)	fhuB →	iron(III) hydroxamate ABC transporter membrane subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	171,824	0	G	T	100.0%	188.1 / NA	55	A121A (GCG→GCT)	fhuB	iron(III) hydroxamate ABC transporter membrane subunit
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (33/22); total (33/22)

GTGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCGCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGCAATCAATCAGTTACTGGTT  >  NC_000913/171690‑171956

gTGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCtcaggc                                                                                                                                 <  1:859078/140‑1 (MQ=255)

 tGCTGTTTCAGCAAGTGCTGCGTAGCCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCCCTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCtcaggca                                                                                                                                <  1:1464621/140‑1 (MQ=255)

 tGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCtcaggca                                                                                                                                <  2:160821/140‑1 (MQ=255)

 tGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCtcaggca                                                                                                                                <  2:1603577/140‑1 (MQ=255)

 tGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCtcaggca                                                                                                                                <  1:2024841/140‑1 (MQ=255)

    tGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAggg                                                                                                                             >  1:667333/1‑140 (MQ=255)

    tGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAggg                                                                                                                             >  1:142881/1‑140 (MQ=255)

         cAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTtg                                                                                                                        <  1:1087597/140‑1 (MQ=255)

          aGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTtgt                                                                                                                       <  1:1195862/140‑1 (MQ=255)

            cAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTgtgt                                                                                                                     >  2:959863/1‑140 (MQ=255)

             aaGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGtgtt                                                                                                                    <  2:1470880/140‑1 (MQ=255)

               gTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGtgttgt                                                                                                                  <  2:1859101/140‑1 (MQ=255)

               gTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGtgttgt                                                                                                                  <  1:2109059/140‑1 (MQ=255)

                tgctgcGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTgttgtt                                                                                                                 >  1:1914625/1‑140 (MQ=255)

                  ctgcGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTAGAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTgg                                                                                                               >  2:1693722/1‑140 (MQ=255)

                    gcGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCt                                                                                                             <  1:1743765/140‑1 (MQ=255)

                               tGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCttt                                                                                                  >  1:1221000/1‑140 (MQ=255)

                                   ggAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCg                                                                                              <  2:142881/140‑1 (MQ=255)

                                   ggAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCg                                                                                              <  2:667333/140‑1 (MQ=255)

                                   ggAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCg                                                                                              <  1:959863/140‑1 (MQ=255)

                                                                   cgcAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACg                                                              >  1:1348980/1‑140 (MQ=255)

                                                                   cgcAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACg                                                              >  2:1729338/1‑140 (MQ=255)

                                                                    gcAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGc                                                             >  1:1155204/1‑140 (MQ=255)

                                                                    gcAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGGCCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTTTGTTGTTGGCTTAATTGTCTTTTGCGCCCCTGGGGGGAAACGCCTGTCGTCCGTAACgt                                                             >  2:2051401/1‑139 (MQ=255)

                                                                        cTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGAt                                                         <  1:2072587/140‑1 (MQ=255)

                                                                              aTTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTcgc                                                   <  1:1693722/140‑1 (MQ=255)

                                                                                tACCGTCACTACGCTCTGGGCGATCCCTGGTGTGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGAtt                                                        <  1:716313/133‑1 (MQ=255)

                                                                                tACCGTCACTACGCTCTGGGCGATCCCTGGTGTGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGAtt                                                        >  2:716313/1‑133 (MQ=255)

                                                                                tACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCgg                                                 <  1:1162456/140‑1 (MQ=255)

                                                                                tACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCgg                                                 >  2:443226/1‑140 (MQ=255)

                                                                                 aCCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCggg                                                <  2:1155204/140‑1 (MQ=255)

                                                                                  ccGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCgggg                                               >  1:1995139/1‑140 (MQ=255)

                                                                                   cGTCACTACGCTCCGGGCGATCCTTGGTGCGATGGCGAGCCAGTTTGCTGCTAAGGCAGGGGCTGGTGTTGTGGGCTTAATGGTCTTGGGAGTGGGGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGt                                              <  2:1708812/140‑1 (MQ=255)

                                                                                     tCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTg                                            >  1:1058021/1‑140 (MQ=255)

                                                                                        cTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTa                                         >  2:42150/1‑140 (MQ=255)

                                                                                         tACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGCCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAg                                        <  1:1407286/140‑1 (MQ=255)

                                                                                          aCGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGt                                       <  2:1914625/140‑1 (MQ=255)

                                                                                               ctGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGcc                                  >  2:796600/1‑140 (MQ=255)

                                                                                                tGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCt                                 >  1:850311/1‑140 (MQ=255)

                                                                                                tGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCt                                 >  2:1901260/1‑140 (MQ=255)

                                                                                                 gggCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAg                                        <  1:2078118/132‑1 (MQ=255)

                                                                                                 gggCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAg                                        >  2:2078118/1‑132 (MQ=255)

                                                                                                  ggCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCttt                               >  2:19076/1‑140 (MQ=255)

                                                                                                  ggCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCttt                               >  1:1609730/1‑140 (MQ=255)

                                                                                                  ggCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCttt                               >  1:1665873/1‑140 (MQ=255)

                                                                                                   gCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCtttt                              >  2:1709459/1‑139 (MQ=255)

                                                                                                      aTCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGACTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTg                           >  2:1225728/1‑140 (MQ=255)

                                                                                                       tCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTgc                          >  1:428457/1‑140 (MQ=255)

                                                                                                       tCCCTGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCGTTATTgc                          >  2:1680292/1‑140 (MQ=255)

                                                                                                           tGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTgcggcg                      <  1:2051401/140‑1 (MQ=255)

                                                                                                           tGGTGCGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTgcggcg                      <  1:1177111/140‑1 (MQ=255)

                                                                                                                cGATGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatc                 >  2:1156007/1‑140 (MQ=255)

                                                                                                                  aTGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaa               >  2:253749/1‑140 (MQ=255)

                                                                                                                  aTGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaa               >  2:592017/1‑140 (MQ=255)

                                                                                                                  aTGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaa               >  1:1611827/1‑140 (MQ=255)

                                                                                                                  aTGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaa               >  2:705307/1‑140 (MQ=255)

                                                                                                                  aTGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaa               >  2:190861/1‑140 (MQ=255)

                                                                                                                  aTGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaa               >  2:1740988/1‑140 (MQ=255)

                                                                                                                   tGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaat              >  2:219707/1‑140 (MQ=255)

                                                                                                                   tGGCGAGCCAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGcaatcaat              <  2:428457/140‑1 (MQ=255)

                                                                                                                          ccAGTTTGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGCAATCAATCAGTTAc       <  1:1901260/140‑1 (MQ=255)

                                                                                                                               ttGCTGCTCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGCAATCAATCAGTTACTGGtt  <  1:1740988/140‑1 (MQ=255)

GTGCTGTTTCAGCAAGTGCTGCGTAACCCGCTGGCGGAGCCGACGACGCTTGGCGTTGCTACAGGCGCGCAACTGGGGATTACCGTCACTACGCTCTGGGCGATCCCTGGTGCGATGGCGAGCCAGTTTGCTGCGCAGGCAGGGGCTTGTGTTGTTGGCTTAATTGTCTTTGGCGTCGCGTGGGGGAAACGGCTGTCGCCGGTAACGCTGATTCTCGCGGGGTTGGTAGTGAGCCTTTATTGCGGCGCAATCAATCAGTTACTGGTT  >  NC_000913/171690‑171956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A