Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	214,351	C→A	Q21K (CAG→AAG)	yaeQ →	uncharacterized protein YaeQ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	214,351	0	C	A	100.0%	455.7 / NA	131	Q21K (CAG→AAG)	yaeQ	uncharacterized protein YaeQ
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (69/62); total (69/62)

Only 100 of 139 total aligned reads displayed.

ACTCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACCAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTTGTGTGCCGATGATG  >  NC_000913/214214‑214486

acTCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAg                                                                                                                                       >  2:2096258/1‑140 (MQ=255)

acTCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAg                                                                                                                                       >  1:1102655/1‑140 (MQ=255)

acTCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAg                                                                                                                                       >  2:1391264/1‑140 (MQ=255)

 cTCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGt                                                                                                                                      >  1:1739613/1‑140 (MQ=255)

  tCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGtt                                                                                                                                     >  1:2037736/1‑140 (MQ=255)

  tCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGtt                                                                                                                                     >  1:1928562/1‑140 (MQ=255)

    aTTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTtc                                                                                                                                   >  2:167786/1‑140 (MQ=255)

    aTTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTtc                                                                                                                                   >  1:1477923/1‑140 (MQ=255)

    aTTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTtc                                                                                                                                   >  1:1951215/1‑140 (MQ=255)

      ttCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTtctc                                                                                                                                 >  1:781182/1‑140 (MQ=255)

       tCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCg                                                                                                                                <  1:699189/140‑1 (MQ=255)

          gCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATg                                                                                                                             <  2:2037736/140‑1 (MQ=255)

          gCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATg                                                                                                                             <  2:683906/140‑1 (MQ=255)

           cAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGc                                                                                                                            <  1:1687252/140‑1 (MQ=255)

           cAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGc                                                                                                                            <  2:1928562/140‑1 (MQ=255)

           cAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGc                                                                                                                            >  2:1687252/1‑140 (MQ=255)

            aaTATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGcc                                                                                                                           >  1:263849/1‑140 (MQ=255)

            aaTATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGcc                                                                                                                           >  1:1727560/1‑140 (MQ=255)

                tCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCctctc                                                                                                                       >  2:42778/1‑140 (MQ=255)

                tCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCctctc                                                                                                                       >  1:656465/1‑140 (MQ=255)

                acAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCctctc                                                                                                                       <  2:1720334/139‑1 (MQ=255)

                   gcgcCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGAGCGCAACAAGTTTCTCGATGCCTCTCTGa                                                                                                                    >  2:2012155/1‑140 (MQ=255)

                     gccgcAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACg                                                                                                                  <  2:1255191/140‑1 (MQ=255)

                      ccgcAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGc                                                                                                                 >  2:2035/1‑140 (MQ=255)

                         cAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTgg                                                                                                              >  2:1977908/1‑140 (MQ=255)

                         cAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTgg                                                                                                              >  2:1320390/1‑140 (MQ=255)

                         cAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTgg                                                                                                              >  2:329940/1‑140 (MQ=255)

                              gCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGgcgcgc                                                                                                         <  1:1132757/140‑1 (MQ=255)

                                        cGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAg                                                                                               <  2:2080878/140‑1 (MQ=255)

                                        cGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAg                                                                                               <  1:329940/140‑1 (MQ=255)

                                        cGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAg                                                                                               <  1:960062/140‑1 (MQ=255)

                                        cGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAg                                                                                               <  1:262650/140‑1 (MQ=255)

                                         gTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAg                                                                                               <  1:366961/139‑1 (MQ=255)

                                         gTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAg                                                                                               >  2:366961/1‑139 (MQ=255)

                                         gTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGa                                                                                              >  1:819374/1‑140 (MQ=255)

                                            aCAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAAc                                                                                           >  1:2029926/1‑140 (MQ=255)

                                             cAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAAcc                                                                                          >  2:561599/1‑140 (MQ=255)

                                             cAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAAcc                                                                                          <  1:1913847/140‑1 (MQ=255)

                                              aaTGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTTACGCTGCCGCGCCATCCTTCAGAAAccc                                                                                         >  2:797547/1‑140 (MQ=255)

                                                tGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAACCCCAg                                                                                       <  1:42778/140‑1 (MQ=255)

                                                tGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAg                                                                                       >  2:851331/1‑140 (MQ=255)

                                                  gCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGa                                                                                     <  1:851331/140‑1 (MQ=255)

                                                  gCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGa                                                                                     <  1:1537342/140‑1 (MQ=255)

                                                    ctcctGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGc                                                                                   <  1:561599/140‑1 (MQ=255)

                                                     tcctGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCg                                                                                  >  2:1955236/1‑140 (MQ=255)

                                                       ctGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGtt                                                                                >  2:1669908/1‑139 (MQ=255)

                                                       ctGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTa                                                                                <  1:1977908/140‑1 (MQ=255)

                                                       ctGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTa                                                                                <  1:2096258/140‑1 (MQ=255)

                                                          aTTCGAAAGGAGATTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTatga                                                                             >  1:1420533/1‑140 (MQ=255)

                                                               aaaGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGAtgctg                                                                        <  2:922734/140‑1 (MQ=255)

                                                               aaaGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGAtgctg                                                                        <  2:105243/140‑1 (MQ=255)

                                                                    aGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCtt                                                                   >  1:53989/1‑140 (MQ=255)

                                                                         tCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTgg                                                              <  2:2124676/140‑1 (MQ=255)

                                                                          cTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGc                                                             <  1:1277108/140‑1 (MQ=255)

                                                                           ttATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCg                                                            <  1:922634/140‑1 (MQ=255)

                                                                             aTGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGtt                                                          >  2:921573/1‑139 (MQ=255)

                                                                             aTGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTg                                                          >  1:884995/1‑140 (MQ=255)

                                                                              tGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTgg                                                         <  2:819374/140‑1 (MQ=255)

                                                                              cggCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATTCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTgg                                                         >  1:2022404/2‑140 (MQ=255)

                                                                                gcgcTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGAtgctgc                                                                       <  1:1613896/124‑1 (MQ=255)

                                                                                gcgcTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGAtgctgc                                                                       >  2:1613896/1‑124 (MQ=255)

                                                                                gcgcTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCt                                                       >  2:134719/1‑140 (MQ=255)

                                                                                 cgcTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTg                                                      >  2:1539237/1‑140 (MQ=255)

                                                                                   cTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGaa                                                    >  1:2067478/1‑140 (MQ=255)

                                                                                   cTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGaa                                                    <  1:1413901/140‑1 (MQ=255)

                                                                                   cTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGaa                                                    >  2:634472/1‑140 (MQ=255)

                                                                                   cTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGaa                                                    >  2:687448/1‑140 (MQ=255)

                                                                                   cTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGaa                                                    >  2:1268393/1‑140 (MQ=255)

                                                                                     tAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAat                                                  <  1:449174/140‑1 (MQ=255)

                                                                                     tAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAat                                                  <  1:1889153/140‑1 (MQ=255)

                                                                                     tAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAat                                                  >  2:832698/1‑140 (MQ=255)

                                                                                       aaGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGACATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCATGGCTGAAatat                                                <  2:1420533/140‑1 (MQ=255)

                                                                                              aaTTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCtgatt                                         >  2:211191/1‑139 (MQ=255)

                                                                                              aaTTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCtgatg                                         <  1:2092683/140‑1 (MQ=255)

                                                                                              aaTTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCtgatg                                         <  1:832698/140‑1 (MQ=255)

                                                                                                tttATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGaa                                                    >  1:2066249/1‑127 (MQ=255)

                                                                                                tttATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGaa                                       >  2:311478/1‑140 (MQ=255)

                                                                                                    taAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTc                                   <  1:1612594/140‑1 (MQ=255)

                                                                                                         cGACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCaa                              <  2:53989/140‑1 (MQ=255)

                                                                                                          gACGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAt                             >  1:386829/1‑140 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            <  2:2067478/140‑1 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            >  2:1738504/1‑140 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            >  1:1152082/1‑140 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            <  1:634472/140‑1 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            >  2:1919786/1‑140 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            >  1:1825124/1‑140 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            >  1:744035/1‑140 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            >  1:1802822/1‑140 (MQ=255)

                                                                                                           aCGGTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAAtt                            >  1:1593096/1‑140 (MQ=255)

                                                                                                             ggTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTa                          <  2:1802822/140‑1 (MQ=255)

                                                                                                             ggTTAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTa                          <  2:80741/140‑1 (MQ=255)

                                                                                                                tAATGTGGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTAccc                       <  2:1771869/140‑1 (MQ=255)

                                                                                                                     tgGCCGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATTTGCTGATGAACGTCTGCAATTTACCCGTGGt                  <  2:748173/140‑1 (MQ=255)

                                                                                                                        ccGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGt                     >  2:1474993/1‑134 (MQ=255)

                                                                                                                        ccGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTtg               >  1:1859174/1‑140 (MQ=255)

                                                                                                                        ccGATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTtg               >  2:1545746/1‑140 (MQ=255)

                                                                                                                          gATCTCGACCGCAACAAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTtgtg             <  1:1983398/140‑1 (MQ=255)

                                                                                                                                     caacaaGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTTGTGTGCCGatgatg  <  2:1825124/140‑1 (MQ=255)

                                                                                                                                     caacaaGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTTGTGTGCCGatgatg  <  1:1955236/140‑1 (MQ=255)

                                                                                                                                     caacaaGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTTGTGTGCCGatgatg  >  2:2081572/1‑140 (MQ=255)

ACTCATTTCTGCAATATCAGCGCCGCAACTGCACGTATTCCGTTACAATGGCCTCCTGATTCGAAAGGAGTTTTCTTATGGCGCTTAAAGCGACAATTTATAAAGCGACGGTTAATGTGGCCGATCTCGACCGCAACCAGTTTCTCGATGCCTCTCTGACGCTGGCGCGCCATCCTTCAGAAACCCAGGAGCGTATGATGCTGCGCTTGCTGGCGTGGCTGAAATATGCTGATGAACGTCTGCAATTTACCCGTGGTTTGTGTGCCGATGATG  >  NC_000913/214214‑214486

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A