Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
434,183 |
C→A |
R243R (CGC→CGA) |
ribD → |
fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 434,183 | 0 | C | A | 100.0%
| 432.9
/ NA
| 126 | R243R (CGC→CGA) | ribD | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (68/58); total (68/58) |
Only 100 of 130 total aligned reads displayed.
CTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACTGATGATGCAACT > NC_000913/434046‑434317
|
cTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAAt > 2:229607/1‑140 (MQ=255)
tGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAAtt > 2:782945/1‑140 (MQ=255)
gCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATtgt > 2:427713/1‑140 (MQ=255)
gCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCAAAAATCGCGTGACGCCGGTACATCGAATtgt > 2:1771982/1‑140 (MQ=255)
ccTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGc < 1:1046027/140‑1 (MQ=255)
aCGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAAc > 2:121812/1‑140 (MQ=255)
aCGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAAc > 2:1876437/1‑140 (MQ=255)
aCGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAAc > 1:2035084/1‑140 (MQ=255)
gCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGt > 2:487738/1‑140 (MQ=255)
gCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGt > 1:109561/1‑140 (MQ=255)
gCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGt > 1:768902/1‑140 (MQ=255)
cGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGtt < 1:782945/140‑1 (MQ=255)
ggTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTcgcg < 2:464578/140‑1 (MQ=255)
tCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTcgcgcg < 1:1177628/140‑1 (MQ=255)
gAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTAc < 1:407391/140‑1 (MQ=255)
gATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 2:64204/1‑140 (MQ=255)
gATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 2:848735/1‑140 (MQ=255)
gATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 2:1394332/1‑140 (MQ=255)
gATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa < 1:1876437/140‑1 (MQ=255)
aTGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGaa > 1:1542924/1‑140 (MQ=255)
aaaCAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGa < 2:556042/139‑1 (MQ=255)
aCAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGAtt > 1:1536616/1‑140 (MQ=255)
aCAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGAtt > 1:1659895/1‑140 (MQ=255)
aCAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGAtt > 2:1107594/1‑140 (MQ=255)
tCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTg > 2:1367527/1‑140 (MQ=255)
cAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGa < 2:1536616/140‑1 (MQ=255)
cAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGa < 1:64204/140‑1 (MQ=255)
aGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGTCGGTACATCGAATTGTGCAGCAGCCCAGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAg < 2:1429477/140‑1 (MQ=255)
aGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAg < 1:1319479/140‑1 (MQ=255)
ggCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGt > 2:1265860/1‑140 (MQ=255)
gcTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGc < 1:1821358/140‑1 (MQ=255)
tctATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCg > 2:1253278/1‑140 (MQ=255)
aTCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGaa < 2:1403477/140‑1 (MQ=255)
tCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGaaa < 1:1107594/140‑1 (MQ=255)
tCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGaaa < 1:1728230/140‑1 (MQ=255)
accggatcaaAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGaaa < 2:1725598/133‑1 (MQ=255)
acGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAAc < 2:559934/139‑1 (MQ=255)
aaacaaAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGt < 2:795067/139‑1 (MQ=255)
aacaaAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGtt > 2:1282373/1‑139 (MQ=255)
acaaAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGc > 1:1542322/1‑140 (MQ=255)
acaaAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGc < 2:1693520/140‑1 (MQ=255)
aaTCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGtcc > 2:1136638/1‑138 (MQ=255)
aTCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGAGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTAcc < 2:1767992/140‑1 (MQ=255)
tcCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTg > 1:477423/1‑140 (MQ=255)
cGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCt < 1:1394332/140‑1 (MQ=255)
aGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGAtt > 2:855389/1‑140 (MQ=255)
cGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCa < 2:2035084/140‑1 (MQ=255)
cGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCa < 1:1367527/140‑1 (MQ=255)
cGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCa < 2:1542924/140‑1 (MQ=255)
cGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCa < 1:821942/140‑1 (MQ=255)
cGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCa < 1:1184630/140‑1 (MQ=255)
tACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCagag > 2:784528/1‑140 (MQ=255)
cGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCa < 1:164358/140‑1 (MQ=255)
gTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCAt < 1:650332/140‑1 (MQ=255)
ttGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATaaa > 2:1104689/1‑140 (MQ=255)
ttGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATaaa > 1:1023238/1‑140 (MQ=255)
tgtgATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAg < 1:848735/140‑1 (MQ=255)
gtgATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAgg < 1:218398/140‑1 (MQ=255)
gtgATTGATAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAgg < 2:1200003/140‑1 (MQ=255)
tgattgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGt > 1:805997/1‑140 (MQ=255)
tgattgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGt > 1:852381/1‑140 (MQ=255)
tgattgatAGCCAAAATCGCGTGACGCCGGTACAACGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGt < 2:1076569/140‑1 (MQ=255)
gattgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTc > 2:1175896/1‑140 (MQ=255)
gattgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTc > 1:528189/1‑140 (MQ=255)
gattgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTc > 1:1467507/1‑140 (MQ=255)
attgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCa > 1:1456296/1‑140 (MQ=255)
attgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCa > 2:1929219/1‑140 (MQ=255)
attgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCa > 2:2141895/1‑140 (MQ=255)
attgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCa > 1:1292408/1‑140 (MQ=255)
attgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCa < 1:1929219/140‑1 (MQ=255)
attgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCa > 2:521617/1‑140 (MQ=255)
ttgatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCat < 2:1612368/140‑1 (MQ=255)
gatAGCCAAAATCGCGTGACGCCGGTACATCGATTTGTGCATCAGTACGGCGAAATTTGGGTCGCGGGTACGAAGGAAGGTTCTCGTGAGTGGCCGGAAACGGGGCGTACCTTGCTGATTCCAGAGCATAAAGGGCatct > 2:1430333/1‑140 (MQ=255)
gatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatct > 1:856027/1‑140 (MQ=255)
gatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatct > 1:896828/1‑140 (MQ=255)
gatAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatct > 1:964320/1‑140 (MQ=255)
atAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctg > 1:2114441/1‑140 (MQ=255)
atAGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctg > 2:40297/1‑140 (MQ=255)
aGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctgga < 2:578749/140‑1 (MQ=255)
aGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctgga < 1:784528/140‑1 (MQ=255)
aGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctgga < 1:36906/140‑1 (MQ=255)
aGCCAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctgga < 2:1542322/140‑1 (MQ=255)
ccAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctggatc > 2:1778368/1‑140 (MQ=255)
ccAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctggatc > 1:1354846/1‑140 (MQ=255)
ccAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctggatc > 1:85708/1‑140 (MQ=255)
ccAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctgga > 1:1188119/1‑138 (MQ=255)
ccAAAATCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctgga < 2:1188119/138‑1 (MQ=255)
aaaTCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctggatctgg > 1:745680/1‑140 (MQ=255)
aaaTCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctggatctgg < 2:1023238/140‑1 (MQ=255)
aaaTCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCatctggatctgg < 2:1354846/140‑1 (MQ=255)
aaTCGCGTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGt < 1:1512333/140‑1 (MQ=255)
cgcgTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGt < 1:1253278/140‑1 (MQ=255)
gcgTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTa < 2:2114441/140‑1 (MQ=255)
cgTGACGCCGGTACATTGAATTGTGCAGCAGCCCGGCGCAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGGGGCCGTAAACGGTGCGGACCTTGCCGATTCCAGCTCATAAAGGGCCTCTGGATCTGGGTGTAc > 2:946232/1‑140 (MQ=255)
cgTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTAc > 1:1922528/1‑140 (MQ=255)
cgTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTAc > 2:1722314/1‑140 (MQ=255)
gTGACGCCGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACt > 2:1830640/1‑140 (MQ=255)
cGGTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTGCCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACTGatgatg < 2:1456296/140‑1 (MQ=255)
gTACATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACTGATGATGCa < 2:440136/140‑1 (MQ=255)
cATCGAATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACTGATGATGCAACt < 1:1379922/140‑1 (MQ=255)
|
CTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCTCGTGAGTGGCCGGAAACGGTGCGTACCTTGCTGATTCCAGAGCATAAAGGTCATCTGGATCTGGTTGTACTGATGATGCAACT > NC_000913/434046‑434317
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
