Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	453,438	C→A	Q36H (CAG→CAT)	ampG ←	muropeptide:H(+) symporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	453,438	0	C	A	100.0%	219.3 / NA	64	Q36H (CAG→CAT)	ampG	muropeptide:H(+) symporter
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (28/36); total (28/36)

GCCGCCGCCCAAAAAATGGAGGCGTGTAGCGGTCCATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCCTGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCGGCTTGCA  >  NC_000913/453305‑453569

gccgccgccCAAAAAATGGAGGCGTGTAGCGGTCCATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAg                                                                                                                               <  2:1671303/140‑1 (MQ=255)

           aaaaaTGGAGGCGTGTAGCGGTCCATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGt                                                                                                                    <  1:1185402/140‑1 (MQ=255)

            aaaaTGGAGGCGTGTAGCGGTCCATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTc                                                                                                                   <  2:773927/140‑1 (MQ=255)

                        tgtAGCGGTCCATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGt                                                                                                       >  2:1591170/1‑140 (MQ=255)

                                  cATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTTAGGGCGAGCGGTAGCCCGGAAg                                                                                             >  1:644781/1‑140 (MQ=255)

                                  cATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAg                                                                                             <  2:1288474/140‑1 (MQ=255)

                                  cATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAg                                                                                             >  2:1335344/1‑140 (MQ=255)

                                  cATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAg                                                                                             >  2:2033912/1‑140 (MQ=255)

                                   aTCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGc                                                                                            <  1:1648477/140‑1 (MQ=255)

                                    acAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCa                                                                                           <  2:585096/139‑1 (MQ=255)

                                     cAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCaa                                                                                          <  1:1335344/140‑1 (MQ=255)

                                       gCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCaaaa                                                                                        >  1:1588861/1‑140 (MQ=255)

                                       gCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCa                                                                                           >  1:876313/1‑137 (MQ=255)

                                       gCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCa                                                                                           <  2:876313/137‑1 (MQ=255)

                                          gTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAAccc                                                                                     >  1:1857436/1‑140 (MQ=255)

                                          gTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAAccc                                                                                     >  2:822968/1‑140 (MQ=255)

                                          gTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAAccc                                                                                     <  2:1568758/140‑1 (MQ=255)

                                           tGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTTAGGGCGAGCGGTAGCCCGGAAGCAAAACCCa                                                                                    <  2:644781/140‑1 (MQ=255)

                                             aCCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAgg                                                                                  >  1:1762105/1‑140 (MQ=255)

                                             aCCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAgg                                                                                  <  1:1287668/140‑1 (MQ=255)

                                             aCCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAgg                                                                                  >  1:2033496/1‑140 (MQ=255)

                                             aCCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAgg                                                                                  <  1:1571307/140‑1 (MQ=255)

                                              ccAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGa                                                                                 <  2:2134697/140‑1 (MQ=255)

                                                agagGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATc                                                                               <  2:2033496/140‑1 (MQ=255)

                                                agagGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATc                                                                               <  1:193842/140‑1 (MQ=255)

                                                  agGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAg                                                                             >  2:406090/1‑140 (MQ=255)

                                                  agGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAg                                                                             >  2:963146/1‑140 (MQ=255)

                                                      aTTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAat                                                                         <  1:2033912/140‑1 (MQ=255)

                                                       tttAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAata                                                                        >  1:767658/1‑140 (MQ=255)

                                                       tttAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAata                                                                        >  1:244145/1‑140 (MQ=255)

                                                               cGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGaa                                                                >  1:88171/1‑140 (MQ=255)

                                                                 tAAGCCTGGCCTACCAGAGAGAAGAAATCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAAcg                                                              >  1:1745866/1‑140 (MQ=255)

                                                                 tAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAAcg                                                              >  1:156798/1‑140 (MQ=255)

                                                                 tAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAAcg                                                              <  2:40752/140‑1 (MQ=255)

                                                                    gCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCgg                                                           <  2:767658/140‑1 (MQ=255)

                                                                    gCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCgg                                                           <  2:244145/140‑1 (MQ=255)

                                                                          ccTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTg                                                        >  2:392996/1‑137 (MQ=255)

                                                                          ccTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTg                                                        <  1:392996/137‑1 (MQ=255)

                                                                            tACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGaa                                                   <  1:953832/140‑1 (MQ=255)

                                                                             aCCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGaaa                                                  <  2:88171/140‑1 (MQ=255)

                                                                               aagagagAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGaaaaa                                                <  2:1762105/139‑1 (MQ=255)

                                                                                 gagagaAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATa                                              <  2:1669785/140‑1 (MQ=255)

                                                                                        gaaACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAat                                       >  2:1283849/1‑140 (MQ=255)

                                                                                         aaaCCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAata                                      <  1:730698/140‑1 (MQ=255)

                                                                                           aCCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATAtt                                    >  1:189457/1‑140 (MQ=255)

                                                                                                tGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAACCCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGa                                  <  1:659561/137‑1 (MQ=255)

                                                                                                tGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTg                               >  2:1511461/1‑140 (MQ=255)

                                                                                                tGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGCAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGa                                  >  2:659561/1‑137 (MQ=255)

                                                                                                       gagaTCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATgg                        <  2:1857436/140‑1 (MQ=255)

                                                                                                         gaTCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGc                      <  2:697283/140‑1 (MQ=255)

                                                                                                         gaTCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGc                      <  2:376599/140‑1 (MQ=255)

                                                                                                         gaTCGATATTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCAGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGc                      <  1:1219070/140‑1 (MQ=255)

                                                                                                              atatTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTa                 <  2:1588861/140‑1 (MQ=255)

                                                                                                              atatTCTCGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTa                 <  2:189457/140‑1 (MQ=255)

                                                                                                                   ctcGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGc            <  2:156798/140‑1 (MQ=255)

                                                                                                                   ctcGACCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGc            <  2:2138948/140‑1 (MQ=255)

                                                                                                                       aCCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGc                      <  1:1929504/126‑1 (MQ=255)

                                                                                                                       aCCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGc                      >  2:1929504/1‑126 (MQ=255)

                                                                                                                       aCCGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCgt        >  2:354087/1‑139 (MQ=255)

                                                                                                                       aCCGTCATCCAGGCATGTAAGGTACAGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCgt        >  2:1682756/1‑139 (MQ=255)

                                                                                                                         cGTCATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCGGCt      >  1:686927/1‑140 (MQ=255)

                                                                                                                            cATCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCGGCTTGc   >  2:674492/1‑140 (MQ=255)

                                                                                                                             aTCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCGGCTTGCa  <  1:822968/140‑1 (MQ=255)

                                                                                                                             aTCCAGGCATGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCGGCTTGCa  >  2:2079382/1‑140 (MQ=255)

GCCGCCGCCCAAAAAATGGAGGCGTGTAGCGGTCCATCAGCGGTGACCAGAGGAATTTAAAAACGTAAGCCTGGCCTACCAGAGAGAAGAAACCAATGGTTTTGAGATCGATATTCTCGACCGTCATCCAGGCCTGTAAGGTACCGGATGTCAGGGCGAGCGGTAGCCCGGAAGCAAAACCCAGGATCAGCAATATGGCTGAACGCGGCTGTTGAAAAATACGTAAATATTGACTGGACATGGGCGTCTACAGGCCCGGCTTGCA  >  NC_000913/453305‑453569

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A