Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
459,610 |
C→A |
L241L (CTC→CTA) |
lon → |
Lon protease |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 459,610 | 0 | C | A | 100.0%
| 417.0
/ NA
| 119 | L241L (CTC→CTA) | lon | Lon protease |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (86/33); total (86/33) |
Only 100 of 120 total aligned reads displayed.
TGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAG > NC_000913/459474‑459746
|
tGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGaa > 1:1030685/1‑140 (MQ=255)
tGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGaa > 2:25655/1‑140 (MQ=255)
ggCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGaaa > 2:1939471/1‑140 (MQ=255)
ggCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGaaa > 2:605094/1‑140 (MQ=255)
tgatgGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTGAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGATCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGgac > 2:1364799/1‑140 (MQ=255)
tgatgGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGgac > 1:72773/1‑140 (MQ=255)
tgGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGgacgac > 2:1686481/1‑140 (MQ=255)
aTCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACgcgc < 2:2027647/140‑1 (MQ=255)
aTCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACgcgc > 1:1564777/1‑140 (MQ=255)
ggAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCgg > 1:982077/1‑140 (MQ=255)
gAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCggc > 2:1228426/1‑139 (MQ=255)
aaTCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACg > 1:505120/1‑140 (MQ=255)
aaTCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACg > 2:953285/1‑140 (MQ=255)
tCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGaa > 2:1945320/1‑140 (MQ=255)
gATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGaaaa < 1:620578/140‑1 (MQ=255)
tCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTGAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACg < 1:1364799/140‑1 (MQ=255)
tCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACg < 1:1308301/140‑1 (MQ=255)
tCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACg < 1:1204914/140‑1 (MQ=255)
tCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACg < 1:875298/140‑1 (MQ=255)
tCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACg < 2:2037493/140‑1 (MQ=255)
gctgcAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAg > 1:1415428/1‑140 (MQ=255)
ctgcAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGTGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGc > 1:882207/1‑140 (MQ=255)
gcAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGccc > 1:1290550/1‑140 (MQ=255)
cAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCt > 2:886992/1‑140 (MQ=255)
gTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGaa > 2:1957841/1‑140 (MQ=255)
gTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGaa > 1:1593951/1‑140 (MQ=255)
agaAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc > 2:2147364/1‑140 (MQ=255)
agaAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc > 2:781952/1‑140 (MQ=255)
agaAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc > 1:1301310/1‑140 (MQ=255)
agaAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc > 2:1027261/1‑140 (MQ=255)
agaAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAgcgc > 2:588300/1‑140 (MQ=255)
cATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCg > 2:304280/1‑140 (MQ=255)
cATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCg > 2:1878252/1‑140 (MQ=255)
tCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGAcg > 2:1391514/1‑140 (MQ=255)
aCCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACgcggcg < 1:872779/140‑1 (MQ=255)
ccGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGa < 2:1593951/140‑1 (MQ=255)
acgcgTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGa < 2:621186/139‑1 (MQ=255)
cgcgTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGaa < 2:1255125/140‑1 (MQ=255)
gcgTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAg > 2:1616641/1‑140 (MQ=255)
ttAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATg > 1:62835/1‑140 (MQ=255)
ttAAAAAGCAGATGGAGAAATCCCAGCGTGAGCACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATg > 2:1435443/1‑140 (MQ=255)
aaGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGaa < 2:1678252/140‑1 (MQ=255)
tGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCa < 2:1564777/140‑1 (MQ=255)
ggAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCaa > 1:913275/1‑140 (MQ=255)
ggAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCaa < 1:1616641/140‑1 (MQ=255)
gagaAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCaaa < 1:1957841/140‑1 (MQ=255)
gaAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAag > 1:17176/1‑140 (MQ=255)
aaTCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAagag < 1:886992/140‑1 (MQ=255)
ccAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAg > 2:2130314/1‑140 (MQ=255)
ccAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAg > 1:237833/1‑140 (MQ=255)
aGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCg > 2:925945/1‑140 (MQ=255)
aGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACAAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCg > 2:1748801/1‑140 (MQ=255)
gCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCgg > 2:29852/1‑140 (MQ=255)
tGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAg < 2:1239435/140‑1 (MQ=255)
tGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAg < 2:913275/140‑1 (MQ=255)
tCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGc > 2:2024533/1‑140 (MQ=255)
tCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGc > 1:1444247/1‑140 (MQ=255)
gAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGa > 1:1695534/1‑140 (MQ=255)
gAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGa > 2:1158392/1‑140 (MQ=255)
gAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGa > 2:1039517/1‑140 (MQ=255)
gAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGa > 1:39522/1‑140 (MQ=255)
gAACGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGa > 1:326763/1‑140 (MQ=255)
aaCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGaa > 1:802059/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 1:1986917/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 1:1606814/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 1:1859431/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 1:1107788/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 2:1911411/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 2:867699/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 2:649049/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 2:1836281/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 1:365267/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 1:1217697/1‑140 (MQ=255)
aCGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAg > 2:891172/1‑140 (MQ=255)
cGAGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGc < 2:1436467/140‑1 (MQ=255)
aGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTg > 2:715082/1‑140 (MQ=255)
aGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTg > 2:752364/1‑140 (MQ=255)
aGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTg > 2:1464548/1‑140 (MQ=255)
aGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTg > 1:580496/1‑140 (MQ=255)
aGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTg > 1:174958/1‑140 (MQ=255)
aGCAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGACAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTg > 2:1833985/1‑140 (MQ=255)
cAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGaa > 1:617121/1‑140 (MQ=255)
cAAATGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGaa > 1:425126/1‑140 (MQ=255)
aaTGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGaaaa > 2:198186/1‑140 (MQ=255)
tGAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAatg < 2:351646/140‑1 (MQ=255)
gAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAatga < 2:1301310/140‑1 (MQ=255)
gAAAGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAatga < 1:29852/140‑1 (MQ=255)
aaaGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAatgat < 1:1906191/140‑1 (MQ=255)
aaGCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAatgatg < 2:1290550/140‑1 (MQ=255)
gCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGtc > 2:915551/1‑140 (MQ=255)
gCTATTCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGtc > 2:990993/1‑140 (MQ=255)
ttCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCg > 2:1506086/1‑140 (MQ=255)
ttCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCg < 2:1030685/140‑1 (MQ=255)
ttCAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCg > 1:920903/1‑140 (MQ=255)
cAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGAt < 2:1444247/140‑1 (MQ=255)
cAGAAAGAACTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGAt < 1:1039517/140‑1 (MQ=255)
gaaagaaCTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGt < 2:1217697/140‑1 (MQ=255)
gaaagaaCTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGt < 2:1115771/140‑1 (MQ=255)
aagaaCTAGGTGGAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAACAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAACATGATGTCTCCGATGTCg > 2:1897537/1‑140 (MQ=255)
agaaCTAGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCgg > 2:46819/1‑140 (MQ=255)
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TGATGGCAATGATGGAATCGGAAATCGATCTGCTGCAGGTTGAGAAACGCATTCGCAACCGCGTTAAAAAGCAGATGGAGAAATCCCAGCGTGAGTACTATCTGAACGAGCAAATGAAAGCTATTCAGAAAGAACTCGGTGAAATGGACGACGCGCCGGACGAAAACGAAGCCCTGAAGCGCAAAATCGACGCGGCGAAGATGCCGAAAGAGGCAAAAGAGAAAGCGGAAGCAGAGTTGCAGAAGCTGAAAATGATGTCTCCGATGTCGGCAG > NC_000913/459474‑459746
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
