Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
729,562 |
C→A |
intergenic (+222/‑21) |
ybfA → / → rhsC |
DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 729,562 | 0 | C | A | 99.3%
| 460.0
/ ‑3.0
| 137 | intergenic (+222/‑21) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base A (90/46); total (91/46) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.35e-01 |
Only 100 of 137 total aligned reads displayed.
CATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCTGTTCGGTG > NC_000913/729427‑729696
|
cGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGGTaaaa > 2:1314666/1‑140 (MQ=255)
cGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGATTTCGCCTGTCAGCAGACAAATAACCAGATaaaa > 2:1120449/1‑140 (MQ=255)
gTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAAc > 1:1021542/1‑140 (MQ=255)
gTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAAc > 2:1882672/1‑140 (MQ=255)
taCCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAgg < 2:765974/140‑1 (MQ=255)
taCCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAgg < 1:338995/140‑1 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 1:299776/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 1:258908/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:1295724/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:964547/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:25462/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:211233/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:1336017/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 1:1909988/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:1871992/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:1750167/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:1744796/1‑140 (MQ=255)
aTCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAg > 2:1584191/1‑140 (MQ=255)
tCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCT‑‑CTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAg > 1:75203/1‑140 (MQ=255)
tatTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCgg > 2:411789/1‑140 (MQ=255)
tatTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAggg < 1:1750167/140‑1 (MQ=255)
aatTTTCCTAATTTTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAggg < 2:143979/139‑1 (MQ=255)
ttttCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCg > 1:226785/1‑140 (MQ=255)
ttCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGAc > 1:1924734/1‑140 (MQ=255)
tCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACa < 2:1924734/140‑1 (MQ=255)
tCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACa > 1:928421/1‑140 (MQ=255)
tAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGa < 2:1443442/140‑1 (MQ=255)
tAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGa < 2:903051/140‑1 (MQ=255)
tAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGa < 1:1298235/140‑1 (MQ=255)
aaTTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGAc > 1:1564553/1‑140 (MQ=255)
tCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTa < 1:1967821/140‑1 (MQ=255)
cTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTAt > 2:569365/1‑140 (MQ=255)
aTCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGc > 2:1288100/1‑140 (MQ=255)
aCAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg > 2:364048/1‑140 (MQ=255)
aCAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg > 1:831719/1‑140 (MQ=255)
aCAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg > 2:1592038/1‑140 (MQ=255)
aCAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAg > 2:149825/1‑140 (MQ=255)
aGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCa < 2:258908/140‑1 (MQ=255)
aGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCa < 1:105169/140‑1 (MQ=255)
aGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCa < 1:1072138/140‑1 (MQ=255)
aGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCa < 1:266483/140‑1 (MQ=255)
aGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCa < 1:149825/140‑1 (MQ=255)
tatCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTg > 1:2106427/1‑140 (MQ=255)
tcACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCa > 2:432374/1‑140 (MQ=255)
cACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAg > 2:1246498/1‑140 (MQ=255)
cTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCa > 1:1791477/1‑130 (MQ=255)
tAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGtt > 2:1886427/1‑140 (MQ=255)
tAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGAAGCA‑TTTACCCGGGtt > 2:1657620/1‑140 (MQ=14)
aaGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCATTTTTCCAGGGtt > 2:739336/1‑140 (MQ=255)
aGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGt < 1:390893/130‑1 (MQ=255)
aGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGt > 2:390893/1‑130 (MQ=255)
ggCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAg > 1:2017838/1‑140 (MQ=255)
gCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGc < 1:432374/140‑1 (MQ=255)
cTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGcc < 2:2106427/140‑1 (MQ=255)
tttCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCg < 2:1909988/140‑1 (MQ=255)
ttCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCgg > 2:564124/1‑140 (MQ=255)
ttCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGGTCAGcccg > 1:876202/1‑138 (MQ=255)
tCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAGAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGGTCAGCCggg > 2:1749269/1‑140 (MQ=255)
tCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCggg > 2:2113678/1‑140 (MQ=255)
tCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCggg > 1:1786715/1‑140 (MQ=255)
cTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGGTCAGCCgggg > 1:1602778/1‑140 (MQ=255)
tataAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTa < 1:1592038/140‑1 (MQ=255)
taAATCTGTAGGGCTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCCAGGGTCAGCCcgggcgct > 2:2034626/1‑136 (MQ=14)
aTCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCAt < 2:466200/140‑1 (MQ=255)
ctgaaaggTTTCCCATGTCAGCAGACAAAAAACCAGATAAAACAAGGATGAGCAGATGATCGGAAAACCGGCGTCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATct < 1:1205856/134‑2 (MQ=14)
cTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCg < 1:1871992/140‑1 (MQ=255)
cTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCg < 2:75203/140‑1 (MQ=255)
gTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAG‑AAATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGGACGCATCGGtt > 2:384354/1‑139 (MQ=255)
gTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCggg > 1:1133944/1‑139 (MQ=255)
gTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGt > 1:535802/1‑140 (MQ=255)
gTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGt < 1:1252269/140‑1 (MQ=255)
gTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGGTCAGCCGGGGTACGCATCGGt > 1:729494/1‑140 (MQ=255)
gTAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAACA‑TTTTCCCGGGGTCAGCCGGGGCACGcctgtct > 2:761502/1‑134 (MQ=14)
tAGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTg > 2:490619/1‑140 (MQ=255)
aGGGTTTCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGG‑AGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGcc > 1:605526/1‑140 (MQ=255)
ttCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCa < 2:2017838/140‑1 (MQ=255)
ttCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCa < 2:831719/140‑1 (MQ=255)
tCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTAAGCATCGGTGCCCCCAc > 1:1982385/1‑140 (MQ=255)
tCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGGACGCATCGGTGCCCCCAc > 1:2113596/1‑140 (MQ=255)
tCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGGACGCATCGGTGCCCCCAc > 2:174564/1‑140 (MQ=255)
tCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGGTCAGCCGGGGTACGCATCGGGGCCCCCAc > 2:366710/1‑140 (MQ=255)
tCGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAACA‑TTGTCCAGGGGTCGGCCGGGGGACGCATCGGTGCCCCCAc > 1:1712424/1‑140 (MQ=14)
cGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGGTCAGCCGGGGGACGCATCGGTGcccccccc > 2:1252255/1‑140 (MQ=255)
cGCCTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCATCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCAcc > 1:350090/1‑140 (MQ=255)
cTGTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGc < 1:971256/140‑1 (MQ=255)
gTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGGACGCATCGGTGCCCCCACCGGCGt > 1:1377708/1‑140 (MQ=255)
gTCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCCGGGTACGCACCGGTGCCCCCACCGGCgg > 1:1440114/1‑139 (MQ=255)
tCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTg > 1:1581602/1‑140 (MQ=255)
tCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTg > 1:538972/1‑140 (MQ=255)
tCAGCAGACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCAACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTg > 2:259249/1‑140 (MQ=255)
cagcagACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTgg < 1:1314666/140‑1 (MQ=255)
cagcagACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTgg < 1:1336017/140‑1 (MQ=255)
cagcagACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTgg < 2:1775424/140‑1 (MQ=255)
agcagACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGc < 1:1934482/140‑1 (MQ=255)
agcagACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGc < 1:174564/140‑1 (MQ=255)
cagACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCt > 2:554451/1‑140 (MQ=255)
gACAAATAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCTGt < 2:2079229/140‑1 (MQ=255)
aaTAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGGTCAGCCGGGGGACGCATCGGTGCCCCCACCGGCGTGGCCTGTTCgg > 1:665563/1‑140 (MQ=255)
tAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCTGTTCGgtg > 2:1042520/1‑140 (MQ=255)
tAACCAGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCTGTTCGgtg > 2:1293065/1‑140 (MQ=255)
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CATCGTTATACCAATCGAAACATATATTCATGAAATATATATAAATATTTTCCTAATTGTTCTTATCTGACAGATATCTCACTTAAGGCTTTCTTATAAATCTGTAGGGTTTCGCCTGTCAGCAGACAAATAACCCGATAAAACAAGGATGAGCAGATGAGCGGAAAACCGGCGGCGCGTCAGGGCGACATGACGCAGTATGGCGGTAGCA‑TTGTCCAGGGTTCAGCCGGGGTACGCATCGGTGCCCCCACCGGCGTGGCCTGTTCGGTG > NC_000913/729427‑729696
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
