Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A7 F48 I1 R1
|
508 |
125.6 |
4303852 |
99.2% |
4269421 |
139.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
805,442 |
C→A |
A647E (GCG→GAG) |
ybhJ → |
putative hydratase YbhJ |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 805,442 | 0 | C | A | 99.4%
| 568.5
/ NA
| 165 | A647E (GCG→GAG) | ybhJ | putative hydratase YbhJ |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base A (92/72); total (92/73) |
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 177 total aligned reads displayed.
GTCAGCGAGCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGCGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGAT > NC_000913/805306‑805578
|
aGCGAGCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTg < 2:1599725/140‑1 (MQ=255)
aGCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAg > 2:1192888/1‑140 (MQ=255)
aGCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAg < 2:33360/140‑1 (MQ=255)
gCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGCGAGCTGCCAGc < 2:1691516/140‑1 (MQ=255)
aCAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCgtgt > 2:2124227/1‑140 (MQ=255)
cAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGtgtg < 1:362320/140‑1 (MQ=255)
gagGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGAt > 2:1599991/1‑140 (MQ=255)
tttGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCgg > 2:2104461/1‑140 (MQ=255)
gcgcATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTgt > 2:302571/1‑139 (MQ=255)
cgcATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGc > 1:961908/1‑140 (MQ=255)
cgcATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGc < 1:1423849/140‑1 (MQ=255)
gcATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCg > 1:1396715/1‑140 (MQ=255)
tAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAata < 2:903174/140‑1 (MQ=255)
gCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTg < 1:1031633/140‑1 (MQ=255)
cAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGc < 1:1323384/140‑1 (MQ=255)
gATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCg < 1:2104461/140‑1 (MQ=255)
aTTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCga > 2:1178375/1‑140 (MQ=255)
aTTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAAATGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCga > 1:824523/1‑140 (MQ=255)
ttGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGTGGTCTGGCGAATATTGCCgag < 2:500163/140‑1 (MQ=255)
ttGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCgag > 2:805651/1‑140 (MQ=255)
ttGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGCCTGGCGAATATTGCCgag > 1:2084232/1‑140 (MQ=255)
cTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCgaggag > 2:525439/1‑140 (MQ=255)
tGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGt > 2:1618190/1‑140 (MQ=255)
ggTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTa > 2:1543352/1‑140 (MQ=255)
tCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTAcg < 1:805651/140‑1 (MQ=255)
gCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTa < 1:525439/140‑1 (MQ=255)
tatTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAAc > 2:1423154/1‑140 (MQ=255)
tatTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAAc > 2:188831/1‑140 (MQ=255)
atTGATCCGCTGCAAACTGAAAATGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACg < 2:824523/140‑1 (MQ=255)
gATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTa < 1:1178375/140‑1 (MQ=255)
aTCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTAt > 1:592782/1‑140 (MQ=255)
aTCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTAt > 2:2150919/1‑140 (MQ=255)
aTCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTAt > 1:1213812/1‑140 (MQ=255)
aTCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTAt > 2:821289/1‑140 (MQ=255)
cGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGTTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGt > 2:1411935/1‑140 (MQ=255)
cGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGt > 2:333526/1‑140 (MQ=255)
cGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGt > 2:2061486/1‑140 (MQ=255)
cTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGttt > 2:758261/1‑139 (MQ=255)
cTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGttt > 2:422336/1‑139 (MQ=255)
cTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGttt > 2:1844890/1‑139 (MQ=255)
cTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTc > 2:1885654/1‑140 (MQ=255)
cTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTc > 2:1516316/1‑140 (MQ=255)
gCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTa < 1:1599991/140‑1 (MQ=255)
gCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTa < 1:302571/140‑1 (MQ=255)
gCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTa < 1:333526/140‑1 (MQ=255)
cAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTaa > 1:1027975/1‑140 (MQ=255)
gAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGtcat < 1:669509/140‑1 (MQ=255)
aaTTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGtcatca > 2:1302088/1‑140 (MQ=255)
ggCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGTGACTAAACGCTATCGTTCTAACGTCATCAACTg < 2:1949386/140‑1 (MQ=255)
ggCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGTGACTAAACGCTATCGTTCTAACGTCATCAACTg < 2:1750553/140‑1 (MQ=255)
gcagcaTGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTgg < 1:1618190/140‑1 (MQ=255)
gcagcaTGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTgg < 1:758261/140‑1 (MQ=255)
agcaTGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTgggg < 2:700442/140‑1 (MQ=255)
agcaTGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTgggg < 2:1027975/140‑1 (MQ=255)
aTGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGAt < 1:365050/140‑1 (MQ=255)
ggTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGc < 1:1885654/140‑1 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTgggg > 1:1178694/1‑124 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGc < 1:248971/135‑1 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGc > 2:248971/1‑135 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:363614/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:573677/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:667474/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:694973/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:862828/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:2028674/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:1121802/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:1652503/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 1:1904230/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 1:685125/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 1:1559102/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 1:824189/1‑140 (MQ=255)
tGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaa > 2:1011639/1‑140 (MQ=255)
gAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTTTGGGATGTTACCGCTGCaaa > 2:1872081/1‑140 (MQ=255)
gAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaaa > 1:1937329/1‑140 (MQ=255)
gAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCaaa > 1:1349280/1‑140 (MQ=255)
aaaCCAGGCGATGGTTCTGCGCGTGGACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAAt > 2:1681191/1‑140 (MQ=255)
aaaCCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAAt < 2:592782/140‑1 (MQ=255)
aaaCCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAAt > 2:97220/1‑140 (MQ=255)
aaCCAGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATg > 1:1813673/1‑140 (MQ=255)
aGGCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCgg < 1:1302088/140‑1 (MQ=255)
ggCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGa > 1:2139831/1‑140 (MQ=255)
gCGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGaa > 1:1546584/1‑140 (MQ=255)
cGATGGTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTTGTGAATATTGCCGTGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAg > 1:417641/1‑140 (MQ=255)
ggTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTAcc < 1:2061486/140‑1 (MQ=255)
ggTTCTGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTAcc < 2:192676/140‑1 (MQ=255)
tGCGCGTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCt > 1:1670860/1‑140 (MQ=255)
tGCGCGTGAACAGGCGGAGAGCTGCCAGCGCGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCt > 1:1732993/1‑140 (MQ=255)
cgTGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGa > 1:1552942/1‑140 (MQ=255)
tGAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAg < 1:1121802/140‑1 (MQ=255)
gAACAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGt > 1:1080565/1‑140 (MQ=255)
aaCAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTg < 1:578928/140‑1 (MQ=255)
aaCAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTg < 1:188831/140‑1 (MQ=255)
aaCAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTg < 2:1904230/140‑1 (MQ=255)
cAGGCGGAGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTggg < 1:422336/140‑1 (MQ=255)
ggcggaGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTggggg > 2:1214845/1‑140 (MQ=255)
gcggagAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGa < 1:862828/140‑1 (MQ=255)
gcggagAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGa < 2:1070905/140‑1 (MQ=255)
gcggagAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGa < 2:1349280/140‑1 (MQ=255)
gcggagAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGa < 2:1813673/140‑1 (MQ=255)
cggagAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGAt < 1:1685800/140‑1 (MQ=255)
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GTCAGCGAGCTGACAGAGGTGTTTGCGCGCATTAAGCAGATTGCTGGTCAGGAGCATATTGATCCGCTGCAAACTGAAATTGGCAGCATGGTCTATGCGGTGAAACCAGGCGATGGTTCTGCGCGTGAACAGGCGGCGAGCTGCCAGCGTGTGATTGGCGGTCTGGCGAATATTGCCGAGGAGTACGCGACTAAACGCTATCGTTCTAACGTCATCAACTGGGGGATGTTACCGCTGCAAATGGCGGAAGTACCAACCTTTGAAGTGGGGGAT > NC_000913/805306‑805578
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
