Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A7 F48 I1 R1	508	125.6	4303852	99.2%	4269421	139.6

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	822,835	G→C	T302R (ACA→AGA)	clsB ←	cardiolipin synthase B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	822,835	0	G	C	99.0%	392.8 / ‑3.5	101	T302R (ACA→AGA)	clsB	cardiolipin synthase B
Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (59/41); total (59/42)
Fisher's exact test for biased strand distribution p-value = 4.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.39e-01

Only 100 of 102 total aligned reads displayed.

CCTGCTGACAATCTGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTGTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTT  >  NC_000913/822701‑822970

ccTGCTGACAATCTGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTGTCGcc                                                                                                                                    <  2:400641/140‑1 (MQ=255)

ccTGCTGACAATCTGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGcc                                                                                                                                    <  1:583795/140‑1 (MQ=255)

    ctgACAATCTGCGGCAATAATGCCGTTCAGATTATCGCGCATCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTTACAAACTGAGCGGATCGAGATTACTGGTCCCTACTCTCGCCCAGt                                                                                                                                >  1:1689665/1‑140 (MQ=255)

     tgACAATCTGCGGCAATAATGCCGTTCAGATTATCTCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTg                                                                                                                               <  1:596886/140‑1 (MQ=255)

           tCTGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGccc                                                                                                                                   >  2:1977008/1‑130 (MQ=255)

           tCTGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGccc                                                                                                                                   <  1:1977008/130‑1 (MQ=255)

           tCTGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTc                                                                                                                         >  2:477710/1‑140 (MQ=255)

             tGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCa                                                                                                                       >  2:1688573/1‑140 (MQ=255)

              gCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCAt                                                                                                                      >  1:76728/1‑140 (MQ=255)

              gCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCAt                                                                                                                      >  2:652447/1‑140 (MQ=255)

                      aatGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCa                                                                                                              >  2:1235158/1‑140 (MQ=255)

                      aatGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCa                                                                                                              <  1:1562865/140‑1 (MQ=255)

                        tGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACt                                                                                                            <  1:652447/140‑1 (MQ=255)

                            gTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGc                                                                                                        >  2:1937074/1‑140 (MQ=255)

                             ttCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGcc                                                                                                       >  2:338089/1‑140 (MQ=255)

                              tCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCg                                                                                                      >  1:244293/1‑140 (MQ=255)

                              tCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCg                                                                                                      >  1:122428/1‑140 (MQ=255)

                                  aTTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGa                                                                                                  >  1:2145931/1‑140 (MQ=255)

                                     aTCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAgcg                                                                                               >  1:2078075/1‑140 (MQ=255)

                                       cgcgCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAgcggg                                                                                             >  1:1450954/1‑140 (MQ=255)

                                         cgcAGCGTCTGGTGAAAAAGACGAGCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCTATCAATGCCAGTTTGCCGTGGAgcgggcg                                                                                           >  2:2092170/1‑140 (MQ=255)

                                            aGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGggcggcg                                                                                        >  1:271915/1‑140 (MQ=255)

                                             gCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGggcggcgg                                                                                       >  2:894360/1‑140 (MQ=255)

                                                tCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGcggcggcgg                                                                                    >  2:1197912/1‑140 (MQ=255)

                                                tCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGcggcggcgg                                                                                    >  2:1826189/1‑140 (MQ=255)

                                                tCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGcggcggcgg                                                                                    >  2:1003199/1‑140 (MQ=255)

                                                        aaaTGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCaaa                                                                            >  1:1833617/1‑140 (MQ=255)

                                                              cGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGggcggcgg                                                                                       <  2:1230523/123‑1 (MQ=255)

                                                              cGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGggcggcgg                                                                                       >  1:1230523/1‑123 (MQ=255)

                                                              cGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTg                                                                      >  1:1227657/1‑140 (MQ=255)

                                                              cGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTg                                                                      >  1:2097734/1‑140 (MQ=255)

                                                              cGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTg                                                                      >  2:39701/1‑140 (MQ=255)

                                                              cGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTg                                                                      >  1:1510991/1‑140 (MQ=255)

                                                                   gTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAAcgc                                                                 <  1:1826189/140‑1 (MQ=255)

                                                                   gTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAAcgc                                                                 <  2:2097734/140‑1 (MQ=255)

                                                                   gTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAAcgc                                                                 <  2:76728/140‑1 (MQ=255)

                                                                   gTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAAcgc                                                                 <  2:1833617/140‑1 (MQ=255)

                                                                   gTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAAcgc                                                                 <  2:906931/140‑1 (MQ=255)

                                                                    tGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAAcgcc                                                                >  2:1696497/1‑140 (MQ=255)

                                                                          atgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCttt                                                          >  1:2099100/1‑140 (MQ=255)

                                                                          atgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCttt                                                          >  2:206529/1‑140 (MQ=255)

                                                                           tgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTa                                                         >  2:892834/1‑140 (MQ=255)

                                                                           tgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTa                                                         >  1:1387689/1‑140 (MQ=255)

                                                                           tgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTa                                                         >  1:371329/1‑140 (MQ=255)

                                                                           tgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTa                                                         >  1:1650090/1‑140 (MQ=255)

                                                                           tgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTa                                                         >  2:1079526/1‑140 (MQ=255)

                                                                           tgaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTa                                                         >  2:2014246/1‑140 (MQ=255)

                                                                            gaCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTaa                                                        >  1:208556/1‑140 (MQ=255)

                                                                             aCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAAc                                                       <  2:2099100/140‑1 (MQ=255)

                                                                             aCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAAc                                                       <  1:1937074/140‑1 (MQ=255)

                                                                             aCATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAAc                                                       <  2:271915/140‑1 (MQ=255)

                                                                               aTTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCCTCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCa                                                     <  1:39701/140‑1 (MQ=255)

                                                                               aTTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCa                                                     <  1:236462/140‑1 (MQ=255)

                                                                               aTTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCa                                                     <  2:306504/140‑1 (MQ=255)

                                                                               aTTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCa                                                     <  1:338089/140‑1 (MQ=255)

                                                                               aTTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCa                                                     <  2:122428/140‑1 (MQ=255)

                                                                               aTTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCa                                                     <  1:1699116/140‑1 (MQ=255)

                                                                               aTTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCa                                                     <  1:376673/140‑1 (MQ=255)

                                                                                 ttGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa                                                   <  2:2078075/140‑1 (MQ=255)

                                                                                 ttGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa                                                   >  2:1960128/1‑140 (MQ=255)

                                                                                 ttGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGa                                                   <  1:477710/140‑1 (MQ=255)

                                                                                     ttCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGt                                               <  2:1387689/140‑1 (MQ=255)

                                                                                         agaTTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTtata                                           >  1:370859/1‑140 (MQ=255)

                                                                                         agaTTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTtata                                           >  2:847647/1‑140 (MQ=255)

                                                                                            ttCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGAt                                                  >  1:1818355/1‑130 (MQ=255)

                                                                                            ttCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGAt                                                  <  2:1818355/130‑1 (MQ=255)

                                                                                             tCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGc                                       <  1:1079526/140‑1 (MQ=255)

                                                                                             tCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGc                                       >  1:21594/1‑140 (MQ=255)

                                                                                               aGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCaa                                     >  1:1963519/1‑140 (MQ=255)

                                                                                                  gACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcg                                  <  2:244293/140‑1 (MQ=255)

                                                                                                  gACAAACTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcg                                  <  1:1601253/140‑1 (MQ=255)

                                                                                                     aaaCTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAgcgcgc                               >  2:36649/1‑140 (MQ=255)

                                                                                                       aCTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCAc                             <  1:1003199/140‑1 (MQ=255)

                                                                                                       aCTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCAc                             <  2:21594/140‑1 (MQ=255)

                                                                                                       aCTGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCAc                             >  1:1500622/1‑140 (MQ=255)

                                                                                                         tGAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCg                           >  1:1260206/1‑140 (MQ=255)

                                                                                                          gAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCTGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGa                          <  2:1190481/140‑1 (MQ=255)

                                                                                                          gAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCAc                             >  2:709622/1‑137 (MQ=255)

                                                                                                          gAGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCAc                             <  1:709622/137‑1 (MQ=255)

                                                                                                           aGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGAc                         >  1:886333/1‑140 (MQ=255)

                                                                                                           aGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGAc                         >  2:1345227/1‑140 (MQ=255)

                                                                                                           aGCGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGAc                         >  2:630264/1‑140 (MQ=255)

                                                                                                             cGGATCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGActc                       <  2:208556/140‑1 (MQ=255)

                                                                                                              ggatgaagaTTACTGGACCCTGCTGTCGGCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCAGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGActct                      <  2:1689665/134‑1 (MQ=255)

                                                                                                                aTCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGa                    >  1:556638/1‑140 (MQ=255)

                                                                                                                aTCGAGATTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGa                    >  1:1385618/1‑140 (MQ=255)

                                                                                                                   gagaTTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACaa                 <  2:2145931/140‑1 (MQ=255)

                                                                                                                   gagaTTACTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACaa                 <  1:2014246/140‑1 (MQ=255)

                                                                                                                          cTGGACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCat          >  2:1037791/1‑140 (MQ=255)

                                                                                                                            ggACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCatat        <  1:892834/140‑1 (MQ=255)

                                                                                                                            ggACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCatat        <  2:556638/140‑1 (MQ=255)

                                                                                                                             gACCCTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATc       >  2:996181/1‑140 (MQ=255)

                                                                                                                               cccTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATctg     >  2:1466521/1‑138 (MQ=255)

                                                                                                                               cccTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCg     >  2:1054662/1‑140 (MQ=255)

                                                                                                                                ccTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCgg    <  1:1688573/140‑1 (MQ=255)

                                                                                                                                 cTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGt   <  1:1345227/140‑1 (MQ=255)

                                                                                                                                 cTACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGt   <  2:1510991/140‑1 (MQ=255)

                                                                                                                                  tACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGtt  >  1:2054143/1‑140 (MQ=255)

                                                                                                                                  tACTCTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGtt  >  2:133396/1‑140 (MQ=255)

                                                                                                                                  tACTCTCGCCCAGTGATCGTCCATCAANNCCACTTTGCCGTGGAGCGGGCGGCNGCGGTACNCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGtt  >  1:1983495/1‑140 (MQ=255)

CCTGCTGACAATCTGCGGCAATAATGCCGTTCAGATTATCGCGCAGCGTCTGGTTAAAATGACGATCGTGGATGATGACATTTGCTTCGAGATTCAGTGACAAACTGAGCGGATCGAGATTACTGGACCCTACTGTCGCCCAGTGATCGTCCATCAATGCCACTTTGCCGTGGAGCGGGCGGCGGCGGTACTCAAAAACCTGAACGCCGCCTTTAACCAGATAGTTATACAGCAAGCGCGCACCGACTCTGACAATCGGCATATCCGGTT  >  NC_000913/822701‑822970

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A