Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F48 I1 R1 45 83.3 2696702 99.2% 2675128 139.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 760,657 C→A A651E (GCG→GAG)  sucA → subunit of E1(0) component of 2‑oxoglutarate dehydrogenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913760,6570CA97.8% 325.8 / ‑2.0 92A651E (GCG→GAG) sucAsubunit of E1(0) component of 2‑oxoglutarate dehydrogenase
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base A (50/40);  total (51/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TGAAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGCGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAGGTGGT  >  NC_000913/760523‑760792
                                                                                                                                      |                                                                                                                                       
tgaAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTcc                                                                                                                                    <  1:918161/140‑1 (MQ=255)
tgaAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTcc                                                                                                                                    <  1:148730/140‑1 (MQ=255)
tgaAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTcc                                                                                                                                    <  1:341136/140‑1 (MQ=255)
tgaAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTcc                                                                                                                                    >  2:580003/1‑140 (MQ=255)
     gCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTc                                                                                                                               >  2:1091575/1‑140 (MQ=255)
     gCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTc                                                                                                                               >  2:1198857/1‑140 (MQ=255)
     gCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTc                                                                                                                               >  1:828971/1‑140 (MQ=255)
     gCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTc                                                                                                                               >  2:283777/1‑140 (MQ=255)
     gCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTc                                                                                                                               >  1:1205741/1‑140 (MQ=255)
       aTTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTCCCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTg                                                                                                                             <  1:580003/140‑1 (MQ=255)
       aTTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTg                                                                                                                             <  1:457257/140‑1 (MQ=255)
         tCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTggg                                                                                                                           >  2:1328826/1‑140 (MQ=255)
         tCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTggg                                                                                                                           <  2:828971/140‑1 (MQ=255)
          ccGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGa                                                                                                                          >  2:934031/1‑140 (MQ=255)
           cGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGAc                                                                                                                         <  1:954498/140‑1 (MQ=255)
               tCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCg                                                                                                                     >  2:1042785/1‑140 (MQ=255)
                 gCCTGTCGGGTGAAGACTCCGGTCGGGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTa                                                                                                                   <  2:960867/140‑1 (MQ=255)
                 gCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTa                                                                                                                   <  2:725943/140‑1 (MQ=255)
                 gCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTa                                                                                                                   <  1:690523/140‑1 (MQ=255)
                 gCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTa                                                                                                                   <  2:1042583/140‑1 (MQ=255)
                 gCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTa                                                                                                                   <  1:1024059/140‑1 (MQ=255)
                 gCCTGTCGGGTGAAGACTCCGGTCGCGGTACATTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTa                                                                                                                   <  1:402551/140‑1 (MQ=255)
                   cTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGCGTTCCGTGTCTGGGACTCCGTACt                                                                                                                 >  1:1156953/1‑140 (MQ=255)
                     gTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGt                                                                                                               >  2:6850/1‑140 (MQ=255)
                                    cGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGc                                                                                                >  1:882802/1‑140 (MQ=255)
                                    cGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGc                                                                                                >  1:1337289/1‑140 (MQ=255)
                                    cGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGc                                                                                                >  2:1202693/1‑140 (MQ=255)
                                          cgGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGt                                                                                          <  2:1337289/140‑1 (MQ=255)
                                          cgGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGt                                                                                          <  1:1042785/140‑1 (MQ=255)
                                              aCCTTCTTCCACCGCCACTCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATTTCCATAACGGGCAGGGCGATTTCCGTGTTTGGGACTCCTTACTGTCTGAAGAAGCAGTGTTGGCGTTTGa                                                                                      >  2:11129/1‑140 (MQ=255)
                                               ccTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGaa                                                                                     <  1:257781/140‑1 (MQ=255)
                                                cttcttCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCGCTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAat                                                                                    <  1:230568/140‑1 (MQ=255)
                                                cttcttCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAat                                                                                    <  2:903170/140‑1 (MQ=255)
                                                         ccGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATGACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTAtt                                                                           >  2:1123535/1‑139 (MQ=255)
                                                         ccGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATg                                                                           >  1:425358/1‑140 (MQ=255)
                                                          cGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGTCTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGc                                                                          <  1:1202693/140‑1 (MQ=255)
                                                              aCGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCAcc                                                                      >  1:606625/1‑140 (MQ=255)
                                                               cgcgGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCg                                                                     <  2:882802/140‑1 (MQ=255)
                                                                       tCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCa                                                             <  1:1328826/140‑1 (MQ=255)
                                                                         cacaACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACg                                                           <  1:660768/140‑1 (MQ=255)
                                                                         cacaACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGAAGAACCACg                                                           <  2:1205741/140‑1 (MQ=255)
                                                                         aacaACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACg                                                           <  2:146153/139‑1 (MQ=255)
                                                                          acaACC‑GTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCa                                                         <  2:1229856/140‑1 (MQ=255)
                                                                           caACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCa                                                         <  1:1198857/140‑1 (MQ=255)
                                                                           aaaCCAATCTAACGGTTCCCCTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCa                                                         <  1:11129/139‑1 (MQ=255)
                                                                             aCCAGTCTACCGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCAct                                                       <  1:275073/140‑1 (MQ=255)
                                                                              ccAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCActc                                                      >  1:729872/1‑140 (MQ=255)
                                                                                aGTCTAACGGTTCCACTTACACGCCGGTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTg                                                    >  2:943662/1‑140 (MQ=255)
                                                                                aGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTg                                                    >  2:165927/1‑140 (MQ=255)
                                                                                aGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTg                                                    >  1:144883/1‑140 (MQ=255)
                                                                                aGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTg                                                    >  2:975403/1‑140 (MQ=255)
                                                                                 gTCTAACGGTTCTACTTACACGCCGCTGCAACATATCCTTAACGGGCAGGGCGAGTTCCGTGGCTGGGACTCCGTACTGCATGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTgt                                                   >  2:427520/1‑139 (MQ=255)
                                                                                 gTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGa                                                   >  1:1238890/1‑140 (MQ=255)
                                                                                 gTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGa                                                   >  1:1171089/1‑140 (MQ=255)
                                                                                 gTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGa                                                   >  1:1176781/1‑140 (MQ=255)
                                                                                 gTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGa                                                   >  2:1204187/1‑140 (MQ=255)
                                                                                  tCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGAc                                                  <  1:283777/140‑1 (MQ=255)
                                                                                   cTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGAcc                                                 >  2:182957/1‑140 (MQ=255)
                                                                                      aCGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATc                                              >  2:829057/1‑140 (MQ=255)
                                                                                            ccACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGaa                                        >  2:475066/1‑140 (MQ=255)
                                                                                            ccACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGaa                                        >  2:1130360/1‑140 (MQ=255)
                                                                                            ccACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGaa                                        >  1:285206/1‑140 (MQ=255)
                                                                                            ccACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGaa                                        >  1:284002/1‑140 (MQ=255)
                                                                                               cTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAgcg                                     <  1:182957/140‑1 (MQ=255)
                                                                                               cTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAgcg                                     <  2:144883/140‑1 (MQ=255)
                                                                                                ttACACGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAgcgc                                    >  2:780808/1‑140 (MQ=255)
                                                                                                    acGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGtt                                >  2:1320380/1‑140 (MQ=255)
                                                                                                    acGCCGCTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGtt                                >  1:291283/1‑140 (MQ=255)
                                                                                                         gcTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTg                           <  2:703037/140‑1 (MQ=255)
                                                                                                          cTGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGa                          >  1:1297194/1‑140 (MQ=255)
                                                                                                           tGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGAc                         <  2:1171089/140‑1 (MQ=255)
                                                                                                           tGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGAc                         <  1:943662/140‑1 (MQ=255)
                                                                                                           tGCAACATATCCATAACGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGAc                         <  1:829057/140‑1 (MQ=255)
                                                                                                                          aCGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTgcg          >  2:1277959/1‑140 (MQ=255)
                                                                                                                          aCGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTgcg          <  2:1238890/140‑1 (MQ=255)
                                                                                                                          aCGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTgcg          >  2:956338/1‑140 (MQ=255)
                                                                                                                          aCGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTgcg          <  2:291283/140‑1 (MQ=255)
                                                                                                                          aCGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTgcg          >  1:65467/1‑140 (MQ=255)
                                                                                                                          aCGGGCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTgcg          <  1:165927/140‑1 (MQ=255)
                                                                                                                            gggCAGGGCGCGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCa        <  2:1156953/140‑1 (MQ=255)
                                                                                                                            gggCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCa        >  1:988465/1‑140 (MQ=255)
                                                                                                                             ggCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAg       >  1:353016/1‑140 (MQ=255)
                                                                                                                             ggCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAg       >  2:699697/1‑140 (MQ=255)
                                                                                                                              gCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAgt      >  2:1231495/1‑139 (MQ=255)
                                                                                                                              gCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAgg      >  1:1320453/1‑140 (MQ=255)
                                                                                                                              gCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAgg      <  1:1123535/140‑1 (MQ=255)
                                                                                                                              gCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAgg      >  2:1293640/1‑140 (MQ=255)
                                                                                                                              gCAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAgg      >  2:999780/1‑140 (MQ=255)
                                                                                                                               cAGGGCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAggt     >  2:704651/1‑140 (MQ=255)
                                                                                                                                 gggCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAggtgg   >  1:898380/1‑140 (MQ=255)
                                                                                                                                  ggCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCaa                 >  2:666749/1‑125 (MQ=255)
                                                                                                                                  ggCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCaa                 <  1:666749/125‑1 (MQ=255)
                                                                                                                                  ggCGAGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTAAGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAggtggt  >  2:902219/1‑140 (MQ=255)
                                                                                                                                      |                                                                                                                                       
TGAAGGCATTCCGGTTCGCCTGTCGGGTGAAGACTCCGGTCGCGGTACCTTCTTCCACCGCCACGCGGTGATCCACAACCAGTCTAACGGTTCCACTTACACGCCGCTGCAACATATCCATAACGGGCAGGGCGCGTTCCGTGTCTGGGACTCCGTACTGTCTGAAGAAGCAGTGCTGGCGTTTGAATATGGTTATGCCACCGCAGAACCACGCACTCTGACCATCTGGGAAGCGCAGTTCGGTGACTTCGCCAACGGTGCGCAGGTGGT  >  NC_000913/760523‑760792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A