Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F48 I1 R1
|
55 |
131.7 |
4456318 |
99.2% |
4420667 |
139.7 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
434,100 |
C→A |
Q216K (CAG→AAG) |
ribD → |
fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 434,100 | 0 | C | A | 100.0%
| 474.8
/ NA
| 133 | Q216K (CAG→AAG) | ribD | fused diaminohydroxyphosphoribosylaminopyrimidine deaminase/5‑amino‑6‑(5‑phosphoribosylamino)uracil reductase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (79/54); total (79/54) |
Only 100 of 137 total aligned reads displayed.
GGATCACTTCGCCCCAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCT > NC_000913/433963‑434234
|
tCACTTCGCCCCAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGgcg < 1:1999067/140‑1 (MQ=255)
cGCCCCAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTAt > 1:1033362/1‑140 (MQ=255)
ccccAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATcc > 2:1917452/1‑140 (MQ=255)
ccccAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATcc < 1:1489138/140‑1 (MQ=255)
cccAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCg > 1:344270/1‑140 (MQ=255)
cAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGca < 1:1544879/140‑1 (MQ=255)
ggCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGcaac > 1:1783838/1‑140 (MQ=255)
ggCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGcaac > 2:719696/1‑140 (MQ=255)
gcgcGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGcaaca > 2:2110057/1‑140 (MQ=255)
ggcgTGATGTACAACTACTGCGCGCACAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAAt > 2:1746252/1‑140 (MQ=255)
gcgTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAAtc > 2:740746/1‑140 (MQ=255)
gcgTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAAtc > 2:1076167/1‑140 (MQ=255)
aTGTACAACTACTGCGCGGGCAAAGTCATGCATTTTTAACCGGCAGCGCCACGGTGCTGCCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACGGGATGAGAAAACTAAGGCGCTCTATCCGCAGCAAAATCTCCGt < 2:1033362/140‑1 (MQ=255)
tGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTc < 2:335173/140‑1 (MQ=255)
cAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAAGCTCCGTCAGcc < 1:1760320/140‑1 (MQ=255)
aaCTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCg > 2:921009/1‑140 (MQ=255)
aaCTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCg > 1:1030218/1‑140 (MQ=255)
ctactGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGAt < 1:553633/140‑1 (MQ=255)
atactGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGAt < 2:616419/139‑1 (MQ=255)
tactGCGCGCACAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATa < 1:1746252/140‑1 (MQ=255)
actGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATAc > 1:1362257/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATAct > 2:1864711/1‑139 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATAct > 2:575805/1‑139 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 2:1903905/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 1:1920470/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 2:1489548/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 1:392829/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg < 2:1358226/140‑1 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 1:1733012/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 1:1656512/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 1:1599711/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg < 2:448732/140‑1 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 1:1390695/1‑140 (MQ=255)
ctGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACg > 1:1209724/1‑140 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTa < 1:1917452/140‑1 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTa > 2:1261372/1‑140 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTa > 1:2098507/1‑140 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTa < 2:1732507/140‑1 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTa < 2:1656512/140‑1 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTa < 1:740746/140‑1 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGACACGTa < 2:1442324/140‑1 (MQ=255)
gcgcgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGACTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTa < 1:921009/140‑1 (MQ=255)
cgcgcAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTAttt > 2:119757/1‑139 (MQ=255)
aaGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGtgattg < 2:131739/140‑1 (MQ=255)
aGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGtgattga < 2:1449159/140‑1 (MQ=255)
gCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCa > 2:352255/1‑140 (MQ=255)
gCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCa > 1:1567851/1‑140 (MQ=255)
ccATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCaa > 1:1872505/1‑140 (MQ=255)
aCCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGt < 2:759870/140‑1 (MQ=255)
aCCAGCAGCGCCACGGTGCTGGCGGAAGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGTTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGt < 2:1920470/140‑1 (MQ=255)
ccAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTg > 2:2107742/1‑140 (MQ=255)
cagcagCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGa < 1:3825/140‑1 (MQ=255)
cagcagCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGa < 1:1175552/140‑1 (MQ=255)
agcGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTTTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGcc > 1:739009/1‑140 (MQ=255)
agcGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGcc > 1:2045318/1‑140 (MQ=255)
gcgcCAGGGTGCTGGCGGATGATCCTGCATTAACGGTGCGTTGGTCTGAACAGGATGAACAAGCTAAGGCGCTCTATCCGCAACAATATGTCAGTCAGCCGATCCGTATTGTGAATGATAGCCAATAGCGCGTGACGcca < 2:406514/140‑2 (MQ=255)
gcgcCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCg < 1:2110057/140‑1 (MQ=255)
gcgcCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCg < 2:1580417/140‑1 (MQ=255)
acgcCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTATATCCGCCACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCg < 1:575805/139‑1 (MQ=255)
cgcCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCgg > 1:517204/1‑140 (MQ=255)
ccACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTa > 1:895175/1‑140 (MQ=255)
aCGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACa < 1:1076167/140‑1 (MQ=255)
aCGGTGCAGGAGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAACCTAAGGCGCTCTATCCGCAACAAAACCTCCTTCAGCCGATACGTGTTGTTATTGATAGCCAACATCGCGTGACGCCGGTACa < 1:2090990/140‑1 (MQ=255)
gCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCa < 1:2127385/140‑1 (MQ=255)
tgatCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTgcagc > 1:1718495/1‑140 (MQ=255)
tgatCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTgcagc > 1:581482/1‑140 (MQ=255)
atCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGcagcag > 2:1010731/1‑140 (MQ=255)
tCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCagcagc < 1:719696/140‑1 (MQ=255)
ccTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGc < 1:1165499/140‑1 (MQ=255)
cTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCg > 2:932099/1‑140 (MQ=255)
tAACGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGaa > 1:1404779/1‑140 (MQ=255)
aaCGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGaaa > 2:141804/1‑140 (MQ=255)
aCGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAAc > 1:1605217/1‑140 (MQ=255)
aCGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAAc > 2:1592487/1‑140 (MQ=255)
aCGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAAc > 1:1860465/1‑140 (MQ=255)
aCGGTGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAAc > 1:2045088/1‑140 (MQ=255)
tGCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTgt > 2:1388236/1‑139 (MQ=255)
gCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGt > 1:902593/1‑140 (MQ=255)
gCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGt > 1:2126806/1‑140 (MQ=255)
gCGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCACATTGTGCAGCAGCCCGGCGAAACCTGGt > 1:289037/1‑140 (MQ=255)
cGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGtt > 1:1272834/1‑140 (MQ=255)
cGTTGGTCTGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGtt < 1:1010731/140‑1 (MQ=255)
tGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTa > 2:2147982/1‑140 (MQ=255)
tGAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTa > 1:31328/1‑140 (MQ=255)
gAACTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTAc < 2:532061/140‑1 (MQ=255)
aaCTGGATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACg > 2:1139902/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTTTTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTATGCAAGa > 1:500899/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTcgcgcg < 2:1179019/131‑1 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTa > 1:934823/1‑133 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 2:234028/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 2:2126266/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 1:1830257/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 2:1846400/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 1:1264649/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 1:364083/1‑140 (MQ=255)
gATGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGa > 2:1178703/1‑140 (MQ=255)
tGAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAg < 1:119757/140‑1 (MQ=255)
gAACAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGa < 2:1605217/140‑1 (MQ=255)
aCAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGAtt > 1:1220328/1‑140 (MQ=255)
aCAAACTAAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGGGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGAtt > 2:2173221/1‑140 (MQ=255)
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GGATCACTTCGCCCCAGGCGCGGCGTGATGTACAACTACTGCGCGCGCAAAGTCATGCCATTTTAACCAGCAGCGCCACGGTGCTGGCGGATGATCCTGCCTTAACGGTGCGTTGGTCTGAACTGGATGAACAAACTCAGGCGCTCTATCCGCAACAAAATCTCCGTCAGCCGATACGTATTGTGATTGATAGCCAAAATCGCGTGACGCCGGTACATCGCATTGTGCAGCAGCCCGGCGAAACCTGGTTCGCGCGTACGCAGGAAGATTCT > NC_000913/433963‑434234
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
