Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F48 I1 R1
|
61 |
74.3 |
2613450 |
99.1% |
2589928 |
139.8 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
138,793 |
C→A |
intergenic (+160/+42) |
cueO → / ← gcd |
cuprous oxidase/multicopper oxidase with role in copper homeostasis/quinoprotein glucose dehydrogenase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 138,793 | 0 | C | A | 100.0%
| 288.3
/ NA
| 81 | intergenic (+160/+42) | cueO/gcd | cuprous oxidase/multicopper oxidase with role in copper homeostasis/quinoprotein glucose dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (41/40); total (41/40) |
TCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATCACCACAT > NC_000913/138666‑138926
|
tcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGCTTGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGaacaa > 1:532805/1‑140 (MQ=255)
tcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGaacaat > 2:67162/1‑139 (MQ=255)
tcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGaacaac > 1:1050371/1‑140 (MQ=255)
tcCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGaacaac > 1:1019420/1‑140 (MQ=255)
ggCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACgcgc < 2:735902/140‑1 (MQ=255)
gCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCa > 2:998330/1‑140 (MQ=255)
gCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCa > 1:821048/1‑140 (MQ=255)
ttAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTATGCTAGC‑TGTGCAATCCATTGTTTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGt < 2:1260909/140‑1 (MQ=255)
ttAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGt < 1:546349/140‑1 (MQ=255)
ttAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGt < 2:241546/140‑1 (MQ=255)
tAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGtt > 1:1222602/1‑140 (MQ=255)
tAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGtt > 1:1217323/1‑140 (MQ=255)
tgatgaCAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTCGTCAg > 1:23118/1‑140 (MQ=255)
cGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGc < 1:315473/140‑1 (MQ=255)
gCAAATCTGGCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTGTGCACAATTTTGTAGGCTGGATATGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCa < 2:1114273/140‑1 (MQ=255)
aTCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTc < 2:1230906/140‑1 (MQ=255)
tCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCt < 1:789648/140‑1 (MQ=255)
tCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCt < 1:389915/140‑1 (MQ=255)
ccTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACt > 1:1279924/1‑140 (MQ=255)
ccTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACt < 2:665339/140‑1 (MQ=255)
ccTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACt > 1:775524/1‑140 (MQ=255)
ccTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGCGCAATCCATTGATTTTGCACAA‑TTTGTAGGCTGGACAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACtt > 1:822096/1‑140 (MQ=25)
cTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACtt > 1:776352/1‑140 (MQ=255)
gATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTca < 1:902412/140‑1 (MQ=255)
gATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTca < 1:1116789/140‑1 (MQ=255)
tGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTcaca < 2:1217323/140‑1 (MQ=255)
tGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTcaca > 1:815411/1‑140 (MQ=255)
tGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTcaca < 2:441064/140‑1 (MQ=255)
cTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGc < 2:1050371/140‑1 (MQ=255)
ttATCAGGCCTACGCTAGC‑TGTGCAATCTATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCa < 2:1222602/140‑1 (MQ=255)
aTCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAgc > 1:1148384/1‑140 (MQ=255)
aGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCa < 1:73901/140‑1 (MQ=255)
aGGCATACGCTAGC‑TGTGAAATCAATTGATTTTGCACAATTTTGTAGGTTGGATAAGGTGTTCACGCCGCATCAGGCATGAACAACGCGCGCGTTGTCAGCAATCTGAGTAATTCTTACTTCACATCATCCGGCGGcaca < 2:131551/140‑1 (MQ=255)
gtccaCGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATa > 2:35696/5‑140 (MQ=255)
gCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATa > 1:1255028/1‑140 (MQ=255)
gCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATa > 1:1145879/1‑140 (MQ=255)
gCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATa < 2:815411/140‑1 (MQ=255)
gCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACACCATCCGGCAGCGCATa < 2:141849/140‑1 (MQ=255)
cttACGCTAGCTTGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATa < 2:532805/138‑1 (MQ=255)
cTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAg < 2:1145879/140‑1 (MQ=255)
cTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAg < 2:282325/140‑1 (MQ=255)
cTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAg > 2:144410/1‑140 (MQ=255)
tACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGc < 2:173214/140‑1 (MQ=255)
cGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCca > 1:538641/1‑140 (MQ=255)
gCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCcac > 1:66252/1‑140 (MQ=255)
cAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTcc > 1:673077/1‑139 (MQ=255)
cAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCg > 1:829154/1‑140 (MQ=255)
cAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCg < 2:292227/140‑1 (MQ=255)
aTCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGcc < 2:787947/140‑1 (MQ=255)
aTCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGcc < 1:1254498/140‑1 (MQ=255)
ttttGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGt < 2:23118/140‑1 (MQ=255)
ttGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTAc < 1:336441/140‑1 (MQ=255)
ttGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTAc < 2:1012898/140‑1 (MQ=255)
gCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCa > 2:141759/1‑140 (MQ=255)
ttttGTAGGCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGaa < 2:1255028/140‑1 (MQ=255)
gCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTGCCAAATGAACCGTGAcc > 1:275794/1‑140 (MQ=255)
gCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGAcc > 1:389580/1‑140 (MQ=255)
gCTGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGAcc > 1:391455/1‑140 (MQ=255)
tGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGc > 1:906599/1‑140 (MQ=255)
tGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGc > 1:1133977/1‑140 (MQ=255)
tGGATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGc > 1:276302/1‑140 (MQ=255)
gATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCt > 1:74862/1‑140 (MQ=255)
gATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCt > 1:830144/1‑140 (MQ=255)
gATAAGGCGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCt > 1:988779/1‑140 (MQ=255)
cGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGgaga < 1:1140014/140‑1 (MQ=255)
cGTTCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGgaga < 2:391455/140‑1 (MQ=255)
cGTCCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGgaga < 2:1279924/140‑1 (MQ=255)
ttCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATc < 2:982591/140‑1 (MQ=255)
tCACGCCGCATCAGGCTTGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATca > 1:192389/1‑140 (MQ=255)
tCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATca > 1:398675/1‑140 (MQ=255)
tCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATca > 2:248376/1‑140 (MQ=255)
tCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATca < 2:469527/140‑1 (MQ=255)
tCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATca > 1:912031/1‑140 (MQ=255)
tCACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATca > 1:204503/1‑140 (MQ=255)
cACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATcac > 1:603200/1‑140 (MQ=255)
cACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCCGCGgaga < 2:328641/136‑1 (MQ=255)
cACGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCCGCGgaga > 1:328641/1‑136 (MQ=255)
aCGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATcacc < 2:603200/140‑1 (MQ=255)
aCGCCGCATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATcacc < 1:625539/140‑1 (MQ=255)
ccgcATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCTAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATCACcaca < 2:1019420/140‑1 (MQ=255)
ccgcATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATcacctca < 1:423074/140‑4 (MQ=255)
ccgcATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCAACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATCACcaca < 2:204503/140‑1 (MQ=255)
cgcATCAGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATCACCACAt > 1:339144/1‑140 (MQ=255)
|
TCCGGGCATTAAACTGATGACAAACGCAAATCTGCCTGATGCGCTACGCTTATCAGGCCTACGCTAGC‑TGTGCAATCCATTGATTTTGCACAATTTTGTAGGCTGGATAAGGCGTTCACGCCGCATCCGGCATGAACAACGCGCACGTTGTCAGCAATCTGAGCAAGTCTTACTTCACATCATCCGGCAGCGCATAAGCCACAATATAGTCGCCCATCTTCGTACCAAATGAACCGTGACCGCCTGCGGAGATCACCACAT > NC_000913/138666‑138926
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
