Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A6 F48 I1 R1	61	74.3	2613450	99.1%	2589928	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	898,314	G→C	W109S (TGG→TCG)	ybjO →	putative inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	898,314	0	G	C	100.0%	259.9 / NA	66	W109S (TGG→TCG)	ybjO	putative inner membrane protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (37/29); total (37/29)

GAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTGGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCTGATGCTGCTGTTCGTTCCCTCGACCA  >  NC_000913/898177‑898451

gAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTcgg                                                                                                                                         >  2:49376/1‑140 (MQ=255)

 aGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCggc                                                                                                                                        >  2:542520/1‑140 (MQ=255)

   tttAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTcggcgg                                                                                                                                      <  1:236538/140‑1 (MQ=255)

      aaCGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCtt                                                                                                                                   >  1:999969/1‑140 (MQ=255)

        cGCTGGTTTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCg                                                                                                                                 <  1:190223/140‑1 (MQ=255)

                tttttAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTa                                                                                                                         <  1:231645/140‑1 (MQ=255)

                  tttAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACg                                                                                                                       >  1:817913/1‑140 (MQ=255)

                   ttAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACgg                                                                                                                      <  1:559726/140‑1 (MQ=255)

                   ttAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACGGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCCCCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACgg                                                                                                                      <  2:816843/140‑1 (MQ=255)

                   ttAAGCAGTCGGGTGCTGTTTTTCATTGAGATCTGGTGTGCGTTTTCAGTGGTGAAAGGGCGTCGCTGGGCGCGGTGGATATATCTGCTGACACAAAACACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACgg                                                                                                                      <  2:116140/140‑1 (MQ=255)

                       gCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTAt                                                                                                                  >  2:134999/1‑140 (MQ=255)

                       gCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTAt                                                                                                                  >  2:160120/1‑140 (MQ=255)

                        cAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATc                                                                                                                 <  2:1064310/140‑1 (MQ=255)

                           tCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCgg                                                                                                              >  1:632252/1‑140 (MQ=255)

                            cTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGa                                                                                                             >  2:572969/1‑140 (MQ=255)

                             tGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAg                                                                                                            <  1:825369/140‑1 (MQ=255)

                             tGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAg                                                                                                            <  1:572969/140‑1 (MQ=255)

                                  cTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGtt                                                                                                       <  1:15451/140‑1 (MQ=255)

                                     gTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAg                                                                                                    >  2:987675/1‑140 (MQ=255)

                                     gTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAg                                                                                                    >  2:10638/1‑140 (MQ=255)

                                     gTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAg                                                                                                    >  2:183632/1‑140 (MQ=255)

                                     gTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAg                                                                                                    >  1:462430/1‑140 (MQ=255)

                                     gTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAg                                                                                                    >  1:136336/1‑140 (MQ=255)

                                          cATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTc                                                                                               >  1:540739/1‑140 (MQ=255)

                                          cATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACAC‑AATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTcc                                                                                              >  2:735271/1‑140 (MQ=255)

                                               agaTCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGt                                                                                          >  2:1104321/1‑140 (MQ=255)

                                               agaTCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGt                                                                                          >  1:63664/1‑140 (MQ=255)

                                                      gtgtGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCGGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCaa                                                                                   <  1:710694/140‑1 (MQ=255)

                                                         tgCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAAc                                                                                >  1:1186502/1‑140 (MQ=255)

                                                         tgCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAAc                                                                                >  1:412075/1‑140 (MQ=255)

                                                         tgCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAAc                                                                                >  2:162025/1‑140 (MQ=255)

                                                           cGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGt                                                                              >  2:949672/1‑140 (MQ=255)

                                                            gTTTTCGCTGGTGAAAGGGCGCGGTAGGGCGGGCGGGTTATAACGGCAGAAAGAAACCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTACAGCATTCCCGGTGAATCAAAACGTg                                                                             <  2:136336/140‑1 (MQ=255)

                                                            gTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTg                                                                             <  2:1044480/140‑1 (MQ=255)

                                                            gTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTg                                                                             <  2:702839/140‑1 (MQ=255)

                                                                tCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCCCCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAAt                                                                         <  1:15568/140‑1 (MQ=255)

                                                                tCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAAt                                                                         <  1:1060442/140‑1 (MQ=255)

                                                                tCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAAt                                                                         <  1:58455/140‑1 (MQ=255)

                                                                              gCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGa                                                           <  1:10638/140‑1 (MQ=255)

                                                                              gCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGa                                                           <  2:462430/140‑1 (MQ=255)

                                                                                gTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGAtg                                                         >  1:1181795/1‑140 (MQ=255)

                                                                                gTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGAtg                                                         >  1:826245/1‑140 (MQ=255)

                                                                                gTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGCTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGAtg                                                         >  1:855926/1‑140 (MQ=255)

                                                                                         cgcgcTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAg                                                <  2:826245/140‑1 (MQ=255)

                                                                                           cgcTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCt                                              >  1:197518/1‑140 (MQ=255)

                                                                                             cTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGc                                            >  2:705957/1‑140 (MQ=255)

                                                                                                gCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCgg                                         <  2:63664/140‑1 (MQ=255)

                                                                                                 cTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCAGa                                        <  1:53675/140‑1 (MQ=255)

                                                                                                  tataTCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGat                                       <  1:1104321/140‑1 (MQ=255)

                                                                                                  tataTCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGat                                       <  2:1275736/140‑1 (MQ=255)

                                                                                                  aatatCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGat                                       <  2:1181795/139‑1 (MQ=255)

                                                                                                      tCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGc                                   <  1:922894/140‑1 (MQ=255)

                                                                                                      tCTGCTGACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGc                                   <  1:49376/140‑1 (MQ=255)

                                                                                                       ctgttgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCt                                  <  2:175749/140‑1 (MQ=255)

                                                                                                        tgctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTc                                 >  2:597073/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCAt                               >  2:642135/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCAt                               >  2:400753/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCAt                               >  2:282370/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCAt                               >  2:259699/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCAt                               >  2:203502/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCAt                               >  2:110239/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCAt                               >  2:1163109/1‑140 (MQ=255)

                                                                                                          ctgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTC‑‑‑GGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCt                            >  1:1082004/1‑140 (MQ=255)

                                                                                                           tgACACAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATc                              >  1:861593/1‑140 (MQ=255)

                                                                                                             acacAAATCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATGCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCt                            >  2:1248832/1‑140 (MQ=255)

                                                                                                                 aaaTCACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCTGAtg                        <  2:412075/140‑1 (MQ=255)

                                                                                                                     cACCGCCGCAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCTGAtgctgc                    <  1:542520/140‑1 (MQ=255)

                                                                                                                           cgcAAGTTACTTGTCGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCTGATGCTGCTgttcg              >  2:817488/1‑140 (MQ=255)

                                                                                                                                    cTTGTCGGCGGCTTC‑‑‑GGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCTGATGCTGCTGTTCGTTCCCTCGACCa  <  2:1082004/140‑1 (MQ=255)

GAGTTTAACGCTGGTCTTTTTAAGCAGTCTGGTGCTGGTTTTCATTGAGATCTGGTGTGCGTTTTCACTGGTGAAAGGGCGTCGCTGGGCGCGCTGGCTATATCTGCTGACACAAATCACCGCCGCAAGTTACTTGTGGGCGGCTTCGCTGGGGTACGGTTATCCGGAGCTGTTCAGCATTCCCGGTGAATCAAAACGTGAAATCTTCCATAGCCTGATGCTGCAGAAGCTGCCGGATATGCTCATCCTGATGCTGCTGTTCGTTCCCTCGACCA  >  NC_000913/898177‑898451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A