Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F48 I1 R1	62	93.4	3176452	99.2%	3151040	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	260,977	C→A	A197E (GCA→GAA)	proB →	glutamate 5‑kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	260,977	0	C	A	100.0%	215.2 / NA	61	A197E (GCA→GAA)	proB	glutamate 5‑kinase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (39/22); total (39/22)

GGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTAT  >  NC_000913/260852‑261112

ggcggcGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTg                                                                                                                           >  1:609897/1‑140 (MQ=255)

       aTTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGa                                                                                                                    <  1:56223/140‑1 (MQ=255)

         tCTTGCGGGTGCCCATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACa                                                                                                                  <  2:487082/140‑1 (MQ=255)

                    ccGATAAACTGTTGCTGCTGACCGATCAAAAACGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGc                                                                                                       >  2:996551/1‑140 (MQ=255)

                      gATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCt                                                                                                     <  1:1101782/140‑1 (MQ=255)

                           aCTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGaa                                                                                                <  2:1120759/140‑1 (MQ=255)

                               ttGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTgg                                                                                            >  1:1242340/1‑140 (MQ=255)

                               ttGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTgg                                                                                            >  2:844590/1‑140 (MQ=255)

                                   tgctgACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTggcggc                                                                                        <  2:1357401/140‑1 (MQ=255)

                                     ctgACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCAt                                                                                      >  1:874535/1‑140 (MQ=255)

                                        aCCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAg                                                                                   <  2:874535/140‑1 (MQ=255)

                                         ccGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGt                                                                                  >  1:1547949/1‑140 (MQ=255)

                                               aaaaaGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCaaa                                                                            >  1:238792/1‑140 (MQ=255)

                                                    ggTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCa                                                                       <  1:844590/140‑1 (MQ=255)

                                                       ttGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGc                                                                    >  2:503640/1‑140 (MQ=255)

                                                        tGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGACATGAGTACCAAATTGCAGGcc                                                                   >  2:869298/1‑140 (MQ=255)

                                                         ttataCCGCTGGCCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCg                                                                  <  1:1205396/139‑1 (MQ=255)

                                                         gTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCg                                                                  <  2:609897/140‑1 (MQ=255)

                                                               cGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACg                                                            >  2:1434571/1‑140 (MQ=255)

                                                               cGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACg                                                            >  1:437729/1‑140 (MQ=255)

                                                               cGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACg                                                            >  1:1535012/1‑140 (MQ=255)

                                                                 cTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTg                                                          >  2:493054/1‑140 (MQ=255)

                                                                 cTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTg                                                          >  2:1082041/1‑140 (MQ=255)

                                                                 cTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTg                                                          >  2:240477/1‑140 (MQ=255)

                                                                   gACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGACATGAGTACCAAATTGCAGGCCGCTGACGTGGc                                                        <  1:869298/140‑1 (MQ=255)

                                                                    aCCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCt                                                       >  1:1366362/1‑140 (MQ=255)

                                                                    aCCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCt                                                       >  1:39422/1‑140 (MQ=255)

                                                                      ccGCGCAACAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTg                                                     <  1:506785/140‑1 (MQ=255)

                                                                         cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCg                                                  >  2:751498/1‑140 (MQ=255)

                                                                         cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCg                                                  >  1:1387704/1‑140 (MQ=255)

                                                                         cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCg                                                  >  2:756729/1‑140 (MQ=255)

                                                                         cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCg                                                  >  2:1137528/1‑140 (MQ=255)

                                                                         cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCg                                                  >  1:196425/1‑140 (MQ=255)

                                                                         cgcAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCCCTGACGTGGCTTGCCg                                                  >  1:1172950/1‑140 (MQ=255)

                                                                                aTCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGt                                           <  2:1496158/140‑1 (MQ=255)

                                                                                 tCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGACTTGCCGTGCGGGTa                                          >  2:1525532/1‑140 (MQ=255)

                                                                                  ccGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTAt                                         <  2:1435705/140‑1 (MQ=255)

                                                                                  ccGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTAt                                         <  2:1387704/140‑1 (MQ=255)

                                                                                      aggcagAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGac                                     <  2:1450233/140‑1 (MQ=255)

                                                                                      aggcagAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGac                                     >  1:845429/1‑140 (MQ=255)

                                                                                      aggcagAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATGGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGGACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGac                                     >  2:64393/1‑140 (MQ=255)

                                                                                        gcagAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGacac                                   <  2:1535012/140‑1 (MQ=255)

                                                                                           gAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATc                                        >  2:783360/1‑132 (MQ=255)

                                                                                           gAACTGATTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATc                                        <  1:783360/132‑1 (MQ=255)

                                                                                                 aTTAAAGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGc                          >  1:282131/1‑140 (MQ=255)

                                                                                                    aaaGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCcgc                       >  1:1127343/1‑140 (MQ=255)

                                                                                                      aGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCgg                     >  1:340627/1‑140 (MQ=255)

                                                                                                      aGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCgg                     >  2:866373/1‑140 (MQ=255)

                                                                                                      aGATGTTTACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCgg                     >  1:261880/1‑140 (MQ=255)

                                                                                                           tttACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGgcagc                >  1:373869/1‑140 (MQ=255)

                                                                                                           tttACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGgcagc                <  2:373869/140‑1 (MQ=255)

                                                                                                           tttACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGgcagc                >  2:703662/1‑140 (MQ=255)

                                                                                                           tttACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGgcagc                >  2:1536938/1‑140 (MQ=255)

                                                                                                            ttACGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGgcagca               >  1:956702/1‑140 (MQ=255)

                                                                                                              aCGGCATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAg             <  2:1547949/140‑1 (MQ=255)

                                                                                                                  cATTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCgg         >  1:469074/1‑140 (MQ=255)

                                                                                                                   aTTGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCggg        <  2:845429/140‑1 (MQ=255)

                                                                                                                    ttGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGc       <  1:756729/140‑1 (MQ=255)

                                                                                                                    ttGATGACGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGAACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGGATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGc       >  1:1009522/1‑140 (MQ=255)

                                                                                                                       atgaCGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGtt    >  1:1124522/1‑140 (MQ=255)

                                                                                                                         gaCGAACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTACCGCGGGCAGCAAGCCGGGCGTTAt  <  2:1242340/140‑1 (MQ=255)

GGCGGCGATTCTTGCGGGTGCCGATAAACTGTTGCTGCTGACCGATCAAAAAGGTTTGTATACCGCTGACCCGCGCAGCAATCCGCAGGCAGAACTGATTAAAGATGTTTACGGCATTGATGACGCACTGCGCGCGATTGCCGGTGACAGCGTTTCAGGCCTCGGAACTGGCGGCATGAGTACCAAATTGCAGGCCGCTGACGTGGCTTGCCGTGCGGGTATCGACACCATTATTGCCGCGGGCAGCAAGCCGGGCGTTAT  >  NC_000913/260852‑261112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A