Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A11 F48 I1 R1	62	93.4	3176452	99.2%	3151040	139.8

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	804,254	G→T	S251I (AGT→ATT)	ybhJ →	putative hydratase YbhJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	804,254	0	G	T	100.0%	306.2 / NA	86	S251I (AGT→ATT)	ybhJ	putative hydratase YbhJ
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (46/40); total (46/40)

GGCTATCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAAGTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCAA  >  NC_000913/804117‑804389

ggCTATCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAAttt                                                                                                                                       <  1:91151/140‑1 (MQ=255)

   tATCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTtctg                                                                                                                                    <  2:132979/140‑1 (MQ=255)

   tATCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACAGTACGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACAGAAACGACCTGTTTAATTtctg                                                                                                                                    <  2:794837/140‑1 (MQ=255)

    aTCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTtctgt                                                                                                                                   <  1:803988/140‑1 (MQ=255)

          ggCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCa                                                                                                                             <  1:1376851/140‑1 (MQ=255)

           gcgcGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCaa                                                                                                                            <  2:1064835/140‑1 (MQ=255)

               ggTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCg                                                                                                                        >  2:820797/1‑140 (MQ=255)

               ggTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCg                                                                                                                        >  2:9222/1‑140 (MQ=255)

                gtgtTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGa                                                                                                                       <  2:577323/140‑1 (MQ=255)

                gtgtTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGa                                                                                                                       >  1:203721/1‑140 (MQ=255)

                 tgtTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGAt                                                                                                                      >  1:270054/1‑140 (MQ=255)

                     cAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATgaag                                                                                                                  <  2:270054/140‑1 (MQ=255)

                     cAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATgaag                                                                                                                  <  1:385067/140‑1 (MQ=255)

                     cAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATgaag                                                                                                                  <  2:657456/140‑1 (MQ=255)

                     cAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATgaag                                                                                                                  <  1:375430/140‑1 (MQ=255)

                      aaaaaCGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATgaag                                                                                                                  <  2:632460/139‑1 (MQ=255)

                      aaaaaCGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATgaag                                                                                                                  >  1:632460/1‑139 (MQ=255)

                          aCGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTc                                                                                                             >  2:649418/1‑140 (MQ=255)

                          aCGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTc                                                                                                             >  1:882522/1‑140 (MQ=255)

                           cGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTcc                                                                                                            >  2:413683/1‑140 (MQ=255)

                             gTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCAt                                                                                                          >  2:756400/1‑140 (MQ=255)

                             gTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCAt                                                                                                          >  2:983550/1‑140 (MQ=255)

                             gTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCAt                                                                                                          >  2:781860/1‑140 (MQ=255)

                             gTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCAt                                                                                                          >  1:853592/1‑140 (MQ=255)

                                      aaaaCAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAActggctg                                                                                                 >  2:1466745/1‑140 (MQ=255)

                                       aaaCAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAActggctgg                                                                                                <  2:848529/140‑1 (MQ=255)

                                       aaaCAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAActggctgg                                                                                                <  1:1299729/140‑1 (MQ=255)

                                             aGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGc                                                                                          >  2:104516/1‑140 (MQ=255)

                                             aGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGc                                                                                          >  1:1366815/1‑140 (MQ=255)

                                                   ggAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTc                                                                                    <  2:203721/140‑1 (MQ=255)

                                                       ttCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCgg                                                                                <  1:781860/140‑1 (MQ=255)

                                                       ttCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCgg                                                                                >  2:629124/1‑140 (MQ=255)

                                                         cGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGcc                                                                              >  2:384493/1‑140 (MQ=255)

                                                              gACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGAt                                                                         <  1:820797/140‑1 (MQ=255)

                                                              gACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGAt                                                                         <  1:384493/140‑1 (MQ=255)

                                                               aCCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGAtt                                                                        >  2:412492/1‑140 (MQ=255)

                                                                 cGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTAc                                                                      >  2:642843/1‑140 (MQ=255)

                                                                  gggCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACt                                                                     <  1:610110/140‑1 (MQ=255)

                                                                   ggCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTg                                                                    <  1:413683/140‑1 (MQ=255)

                                                                   ggCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTg                                                                    >  1:1318096/1‑140 (MQ=255)

                                                                   ggCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTg                                                                    >  2:1374204/1‑140 (MQ=255)

                                                                   ggCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGAAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTg                                                                    >  1:167682/1‑140 (MQ=255)

                                                                         aGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCt                                                              <  2:959565/140‑1 (MQ=255)

                                                                         aGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGAACGGTCGCGGCCAGGATTACTGCCAGCt                                                              <  1:1131445/140‑1 (MQ=255)

                                                                          gcgcgcTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCtt                                                             <  1:293991/140‑1 (MQ=255)

                                                                               ctctctACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAAccc                                                        >  1:644153/1‑140 (MQ=255)

                                                                                  tctACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGTCAGCTTAACCCTCa                                                     <  2:1558646/140‑1 (MQ=255)

                                                                                    tACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAAc                                                   <  1:983550/140‑1 (MQ=255)

                                                                                      ccGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCg                                                 <  2:882522/140‑1 (MQ=255)

                                                                                      ccGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCg                                                 <  2:1173452/140‑1 (MQ=255)

                                                                                         aTTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATg                                              <  1:1466745/140‑1 (MQ=255)

                                                                                            tCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCGGCTTAACCCTCAACCGATGGCg                                           >  1:1328613/1‑140 (MQ=255)

                                                                                            tCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGct                                           >  2:2240/1‑139 (MQ=255)

                                                                                            tCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCg                                           >  2:999049/1‑140 (MQ=255)

                                                                                            tCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCg                                           >  1:86239/1‑140 (MQ=255)

                                                                                              cGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTTCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGta                                         >  1:173182/1‑140 (MQ=255)

                                                                                              cGTAACAGCGTTGACGTGATGACCACTGAAACGACATGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCg                                                 >  1:251392/1‑132 (MQ=255)

                                                                                              cGTAACAGCGTTGACGTGATGACCACTGAAACGACATGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCg                                                 <  2:251392/132‑1 (MQ=255)

                                                                                                tAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGtact                                       >  2:1272195/1‑140 (MQ=255)

                                                                                                tAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGtact                                       >  1:607628/1‑140 (MQ=255)

                                                                                                tAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCATCAACCGATGGCGtact                                       >  1:881283/1‑140 (MQ=255)

                                                                                                   cAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACg                                    <  1:999049/140‑1 (MQ=255)

                                                                                                      cGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACg                                    <  1:1032458/137‑1 (MQ=255)

                                                                                                      cGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACg                                    >  2:1032458/1‑137 (MQ=255)

                                                                                                      cGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATg                                 >  2:253195/1‑140 (MQ=255)

                                                                                                      cGTTGACGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATg                                 >  1:335732/1‑140 (MQ=255)

                                                                                                            cGTGATGACCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCa                           <  2:173182/140‑1 (MQ=255)

                                                                                                              tgatgaCCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATc                         <  1:444623/140‑1 (MQ=255)

                                                                                                              tgatgaCCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCACGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCAtt                         >  2:1025570/1‑139 (MQ=255)

                                                                                                                atgaCCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAg                       >  1:1263913/1‑140 (MQ=255)

                                                                                                                 tgaCCACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGc                      <  2:86239/140‑1 (MQ=255)

                                                                                                                     cACTGAAACGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTg                  >  1:899896/1‑140 (MQ=255)

                                                                                                                          aaaCGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTa             >  2:182802/1‑140 (MQ=255)

                                                                                                                          aaaCGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTa             >  1:567484/1‑140 (MQ=255)

                                                                                                                            aCGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAg           <  2:1328613/140‑1 (MQ=255)

                                                                                                                             cGACCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAgc          <  1:756400/140‑1 (MQ=255)

                                                                                                                               aCCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAgcgc        >  1:955540/1‑140 (MQ=255)

                                                                                                                               aCCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAgcgc        >  1:10000/1‑140 (MQ=255)

                                                                                                                               aCCTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCACGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAgcgc        >  2:749682/1‑140 (MQ=255)

                                                                                                                                 cTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCa      >  1:1368001/1‑140 (MQ=255)

                                                                                                                                 cTGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCa      <  2:1318096/140‑1 (MQ=255)

                                                                                                                                  tGTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCAt     <  1:2240/140‑1 (MQ=255)

                                                                                                                                   gTTTAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATc    <  1:182802/140‑1 (MQ=255)

                                                                                                                                    tttAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCa   >  1:330912/1‑140 (MQ=255)

                                                                                                                                    tttAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCa   >  2:1191434/1‑140 (MQ=255)

                                                                                                                                     ttAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCaa  <  2:607628/140‑1 (MQ=255)

                                                                                                                                     ttAATTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCATCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCaa  <  2:881283/140‑1 (MQ=255)

GGCTATCATTGGCGCGGTGTTCAAAAACGGTTACGTCAAAAACAAAGTCATGGAGTTCGTTGGACCGGGCGTTAGCGCGCTCTCTACCGATTTCCGTAACAGCGTTGACGTGATGACCACTGAAACGACCTGTTTAAGTTCTGTCTGGCAAACCGATGAAGAAGTCCATAACTGGCTGGCGCTGCACGGTCGCGGCCAGGATTACTGCCAGCTTAACCCTCAACCGATGGCGTACTACGATGGCTGCATCAGCGTTGATTTAAGCGCCATCAA  >  NC_000913/804117‑804389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A