Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F79 I1 R1 21 95.2 3174666 97.7% 3101648 140.1

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 2,721,224 (GGCTGCCG)1→2 coding (1272/2661 nt) pka → protein lysine acetyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 27212121 (0.010)78 (0.890)
+GCCGGGCT
61/238 0.2 98.8% coding (1260/2661 nt) pka protein lysine acetyltransferase
?NC_000913 2721213 = 1 (0.010)coding (1261/2661 nt) pka protein lysine acetyltransferase

CGCCCAGCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2721067‑2721212
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCT  >  NC_000913/2721213‑2721358
                                                                                                                                                  ||||||||                                                                                                                                                  
CGCCCAGCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGC                                                                                                                                                          <  8:108991/148‑1
  aCCAGCGCCGCTGCTACCGCAACAGAATGCGAGCAAGTATTAATTGAATCGGTAAAGCATCATCCCGGCAGCAAATATGTCTGTTTGCTGACGAACTGGTGCGGCGAGCAATCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGG                                                                                                                                                       <  6:263205/148‑1
  CCCAGCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGG                                                                                                                                                       <  5:237033/149‑1
  CCCAGCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGG                                                                                                                                                       <  2:406293/149‑1
        GCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCC                                                                                                                                                 <  7:246789/149‑1
            CTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGC                                                                                                                                             >  1:23010/1‑149
                 CCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCG                                                                                                                                        >  7:59966/1‑149
                  CCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGACGCCGGGCTGCCGGGCTGCCGA                                                                                                                                       >  6:28062/1‑149
                   CGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGAC                                                                                                                                      >  2:209280/1‑149
                    GCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGC                                                                                                                                          >  1:365063/1‑144
                    GCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGC                                                                                                                                          <  2:365063/144‑1
                      AACAGAAAGCGCGCAAGTAGTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTA                                                                                                                                   >  3:52238/1‑149
                       ACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGCGCGGCGAGCACTCCTCGCAAGAGGCACGACGGTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTAC                                                                                                                                  <  8:317506/149‑1
                         AGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCG                                                                                                                                >  1:64340/1‑149
                          GAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCG                                                                                                                                >  3:125778/1‑148
                          GAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCG                                                                                                                                >  6:362310/1‑148
                                  GCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGG                                                                                                                        >  7:237467/1‑148
                                  GCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGC                                                                                                                                                     <  7:317610/119‑1
                                  GCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGC                                                                                                                                                     >  8:317610/1‑119
                                   CAAGTATTAATTGAAGCGTTAAAGCATCATCCCCGGAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTTTTGAGCGAAGCCGGGCTTCCGGGCTGCCGACCTACCGTACCCCGGAA                                                                                                                      <  8:397517/149‑1
                                   CAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAA                                                                                                                      <  6:58608/149‑1
                                   CAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGG                                                                                                                        >  5:58608/1‑147
                                    AAGTATTAATTGAAGCGGTAAAGCATCATCCCCGGAGCAAATTTGTCTCTTTGCTTACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAG                                                                                                                     <  3:132377/149‑1
                                    AAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAG                                                                                                                     >  2:361829/1‑149
                                       TATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAA                                                                                                                  <  4:213674/149‑1
                                         TTAATTGACGCGGTAAAGCAGCCTCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGGGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACC                                                                                                                <  3:53691/149‑1
                                         TTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAAC                                                                                                                 >  3:274757/1‑148
                                            ATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCAT                                                                                                              <  5:237924/148‑1
                                            ATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCAT                                                                                                              <  5:61470/148‑1
                                             TTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCA                                                                                                            <  6:91304/149‑1
                                               GAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACT                                                                                                          >  2:245263/1‑149
                                               GAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCAC                                                                                                           <  6:144344/148‑1
                                               GAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCAC                                                                                                           <  3:339161/148‑1
                                                    GGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTT                                                                                                     >  8:241660/1‑149
                                                      TAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCT                                                                                                                                    <  8:313552/116‑1
                                                      TAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCT                                                                                                                                    >  7:313552/1‑116
                                                       AAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGCGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTAT                                                                                                  >  2:349076/1‑149
                                                       AAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAA                                                                                                                      >  6:342811/1‑129
                                                       AAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAA                                                                                                                      <  5:342811/129‑1
                                                        AAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATG                                                                                                 <  8:56280/149‑1
                                                        AAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTAT                                                                                                  <  2:393647/148‑1
                                                         AGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGC                                                                                                <  8:59966/149‑1
                                                            ATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATA                                                                                             <  7:265308/149‑1
                                                                TCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCT                                                                                                                                            >  7:95253/1‑98
                                                                TCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCT                                                                                                                                            <  8:95253/98‑1
                                                                  CCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTG                                                                                        <  1:209280/148‑1
                                                                  CCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTG                                                                                        <  1:200157/148‑1
                                                                   CCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGA                                                                                      <  7:241660/149‑1
                                                                   CCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTG                                                                                        >  5:53800/1‑147
                                                                       AGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTAC                                                                                  <  6:53800/149‑1
                                                                                  CTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGC                                                                                                <  3:292350/124‑1
                                                                                  CTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGC                                                                                                >  4:292350/1‑124
                                                                                     TTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAG                                                                      >  7:275172/1‑147
                                                                                       TGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAA                                                                    <  5:361956/147‑1
                                                                                       TGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAA                                                                    <  2:23010/147‑1
                                                                                         CTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAATACCGGCGTAATCAGAAGCAA                                                                <  1:245263/149‑1
                                                                                          TGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAAC                                                               >  4:142877/1‑149
                                                                                            ACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTA                                                             <  8:275172/149‑1
                                                                                            ACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGC                                                                                                >  4:155567/1‑114
                                                                                            ACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGC                                                                                                <  3:155567/114‑1
                                                                                              GAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCG                                                                                <  4:328912/128‑1
                                                                                              GAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCG                                                                                >  3:328912/1‑128
                                                                                                ACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGC                                                          >  4:306041/1‑148
                                                                                                 CTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTAATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCG                                                         >  8:397020/1‑148
                                                                                                     TGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTCCCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTCCCGGCGTAATCAGAAGCACCTACGCGAAACG                                                    >  3:293241/1‑149
                                                                                                        GGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCG                                                 <  3:251056/149‑1
                                                                                                                   CTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAG                                      >  1:300080/1‑149
                                                                                                                   CTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAG                                      >  1:62723/1‑149
                                                                                                                   CTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCA                                       <  4:117839/148‑1
                                                                                                                    TCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGCCCTACCGTACCCCGGAAGGAACCATCACTGCTATTATGCATATGGTGGAGAACCGGCGTAATCAGACGCAACTACGCGAAACGCCGGCGTTGCCCAG                                      >  8:172968/1‑148
                                                                                                                    TCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAG                                      >  2:260718/1‑148
                                                                                                                     CGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAA                                                                    >  3:374752/1‑117
                                                                                                                     CGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAA                                                                    <  4:374752/117‑1
                                                                                                                        AAGAGGCACGCCGTTTAGTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATC                                 >  6:293988/1‑149
                                                                                                                               ACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTC                          <  3:306041/149‑1
                                                                                                                                  ACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTTCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAA                       <  8:237467/149‑1
                                                                                                                                    GTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATA                     >  1:249222/1‑149
                                                                                                                                    GTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATA                     <  1:361829/149‑1
                                                                                                                                            AGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAA             <  1:349076/149‑1
                                                                                                                                              CGACGCCGGGCTGCCGGGCTTCCGACCTACCGTACCCCGTAAGTAACCATCACTTCTTTTATGCATATGGTTGAGTACCTGCGTAATCAGAATCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTTACTTCCAATACCGCAGAAGC           <  4:52238/149‑1
                                                                                                                                                AAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCG          >  5:34337/1‑148
                                                                                                                                                AAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCG          >  2:310320/1‑148
                                                                                                                                                  GCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACC                   <  3:278397/137‑1
                                                                                                                                                  GCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACC                   >  4:278397/1‑137
                                                                                                                                                  GCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAAT                                  <  8:121089/122‑1
                                                                                                                                                  GCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAAT                                  >  7:121089/1‑122
                                                                                                                                                   CCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATC      <  1:310320/149‑1
                                                                                                                                                      GGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCG                                                 <  5:337445/103‑1
                                                                                                                                                      GGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCG                                                 >  6:337445/1‑103
                                                                                                                                                       GCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCT  <  1:260718/149‑1
                                                                                                                                                       GCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGAAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCT  >  4:292751/1‑149
                                                                                                                                                  ||||||||                                                                                                                                                  
CGCCCAGCGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2721067‑2721212
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCT  >  NC_000913/2721213‑2721358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.

GATK/CNVnator alignment

BRESEQ :: bam2aln output
CGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATT  >  NC_000913/2721074‑2721374
                                                                                                                                                              |                                                                                                                                                      
CGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCG                                                                                                                                                        <  NB501016:230:HFVJLAFXY:4:21407:21589:19554/151‑1 (MQ=60)
    GCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggct                                                                                                                                                    >  NB501016:230:HFVJLAFXY:1:11104:14008:12117/1‑147 (MQ=60)
         TCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggctgccgc                                                                                                                                               >  NB501016:230:HFVJLAFXY:4:11410:14233:18423/1‑142 (MQ=60)
           CCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggcttccgacc                                                                                                                                             >  NB501016:230:HFVJLAFXY:1:11109:1136:19423/1‑140 (MQ=60)
            CGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggctgcc                                                                                                                                                 >  NB501016:230:HFVJLAFXY:1:21305:2637:3418/1‑139 (MQ=60)
              CAACAGAAAGCGCGCAAGTAGTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggctgccgacctac                                                                                                                                          >  NB501016:230:HFVJLAFXY:2:11111:24683:5609/1‑137 (MQ=60)
                 CAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggctgccgacctaccgt                                                                                                                                       >  NB501016:230:HFVJLAFXY:1:11111:16292:11149/1‑134 (MQ=60)
                  AGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggctgccgacctaccgt                                                                                                                                       >  NB501016:230:HFVJLAFXY:2:11301:22520:15631/1‑133 (MQ=60)
                          CGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGA                                                                                                                                       >  NB501016:230:HFVJLAFXY:4:21406:2126:8801/1‑150 (MQ=60)
                           GCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGCCCTACCGTACCCCGGA                                                                                                                                       >  NB501016:230:HFVJLAFXY:3:11411:11185:16099/1‑149 (MQ=60)
                            CAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGGAGCAAATTTGTCTCTTTGCTTACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGG                                                                                                                                    <  NB501016:230:HFVJLAFXY:2:11302:12012:20312/151‑1 (MQ=60)
                                 ATTAATTGACGCGGTAAAGCAGCCTCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGGGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCA                                                                                                                               <  NB501016:230:HFVJLAFXY:2:11111:7815:10928/151‑1 (MQ=60)
                                 ATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACC                                                                                                                                >  NB501016:230:HFVJLAFXY:2:21206:14427:5823/1‑150 (MQ=60)
                                    AATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATC                                                                                                                             <  NB501016:230:HFVJLAFXY:3:11412:11166:7400/150‑1 (MQ=60)
                                    AATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATC                                                                                                                             <  NB501016:230:HFVJLAFXY:3:21407:20246:18881/150‑1 (MQ=60)
                                       TGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACT                                                                                                                          <  NB501016:230:HFVJLAFXY:2:21306:11044:14893/150‑1 (MQ=60)
                                              GTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggctgccgaccta                                                                                                                                           >  NB501016:230:HFVJLAFXY:4:21508:2301:2517/1‑105 (MQ=60)
                                               TAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAG                                                                                                                                     <  NB501016:230:HFVJLAFXY:3:21603:1395:14078/131‑1 (MQ=60)
                                                    CATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATAT                                                                                                            <  NB501016:230:HFVJLAFXY:4:21410:17847:18818/151‑1 (MQ=60)
                                                        ATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGggctg                                                                                                                                                   >  NB501016:230:HFVJLAFXY:4:11504:18011:18101/1‑95 (MQ=60)
                                                          CCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGG                                                                                                       <  NB501016:230:HFVJLAFXY:1:21101:13209:14818/150‑1 (MQ=60)
                                                          CCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGG                                                                                                       <  NB501016:230:HFVJLAFXY:1:11312:23673:4730/150‑1 (MQ=60)
                                                           CCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAG                                                                                                     <  NB501016:230:HFVJLAFXY:4:21407:18152:3263/151‑1 (MQ=60)
                                                           CCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGG                                                                                                       >  NB501016:230:HFVJLAFXY:3:11410:6245:18889/1‑149 (MQ=60)
                                                             gtcagcaaagagacataTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGT                                                                                                    >  NB501016:230:HFVJLAFXY:2:11212:21305:5521/18‑150 (MQ=60)
                                                                          TCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCA                                                                                                               <  NB501016:230:HFVJLAFXY:2:21209:7332:15322/126‑1 (MQ=60)
                                                                             CTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGA                                                                                     >  NB501016:230:HFVJLAFXY:4:21412:17270:9749/1‑149 (MQ=60)
                                                                               TTGCTGACGAACGGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAG                                                                                   <  NB501016:230:HFVJLAFXY:3:21607:8934:1238/149‑1 (MQ=60)
                                                                                 GCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAATACCGGCGTAATCAGAAGCAAC                                                                               <  NB501016:230:HFVJLAFXY:1:21107:17475:13082/151‑1 (MQ=60)
                                                                                    GACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCA                                                                                                               <  NB501016:230:HFVJLAFXY:2:11307:3643:4695/116‑1 (MQ=60)
                                                                                      CGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGG                                                                                               >  NB501016:230:HFVJLAFXY:2:21304:14598:16916/1‑130 (MQ=60)
                                                                                             GTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTCCCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTCCCGGCGTAATCAGAAGCACCTACGCGAAACGC                                                                   >  NB501016:230:HFVJLAFXY:2:21209:21173:18947/1‑151 (MQ=60)
                                                                                                CGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGG                                                                <  NB501016:230:HFVJLAFXY:2:21201:4347:9940/151‑1 (MQ=60)
                                                                                                           CCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGC                                                     >  NB501016:230:HFVJLAFXY:1:11111:16189:5955/1‑151 (MQ=60)
                                                                                                           CCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGC                                                     >  NB501016:230:HFVJLAFXY:1:21205:6518:7756/1‑151 (MQ=60)
                                                                                                             TCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAG                                                                                   >  NB501016:230:HFVJLAFXY:2:21312:9258:19900/1‑119 (MQ=60)
                                                                                                                       CACGACGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCC                                         <  NB501016:230:HFVJLAFXY:2:21212:23343:10377/151‑1 (MQ=60)
                                                                                                                            CGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATAC                                    <  NB501016:230:HFVJLAFXY:1:21304:20573:11535/151‑1 (MQ=60)
                                                                                                                            CGTTTATTCAGCGAAGCCGGGCTGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATAC                                    >  NB501016:230:HFVJLAFXY:1:21108:22466:7002/1‑151 (MQ=60)
                                                                                                                                    cagcgaagccgggctGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAG                            <  NB501016:230:HFVJLAFXY:1:21302:6808:6040/136‑1 (MQ=60)
                                                                                                                                        gaagccgggctGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGC                         >  NB501016:230:HFVJLAFXY:3:11407:12652:7500/12‑150 (MQ=60)
                                                                                                                                          agccgggctGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCG                                  <  NB501016:230:HFVJLAFXY:2:21206:14940:19754/130‑1 (MQ=60)
                                                                                                                                          agccgggctGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATC                                                 >  NB501016:230:HFVJLAFXY:4:11509:25267:11607/10‑124 (MQ=60)
                                                                                                                                           gccgggctGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCT                     <  NB501016:230:HFVJLAFXY:1:21207:15470:5242/143‑1 (MQ=60)
                                                                                                                                              gggctGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGG                                                                <  NB501016:230:HFVJLAFXY:3:21602:4125:15639/100‑1 (MQ=60)
                                                                                                                                               ggctGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTG                 <  NB501016:230:HFVJLAFXY:1:21110:21317:6567/147‑1 (MQ=60)
                                                                                                                                                    CCGGGCTGCCGACGTACCGTACCCAGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCA            <  NB501016:230:HFVJLAFXY:4:21611:12921:6959/151‑1 (MQ=60)
                                                                                                                                                    CCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCA            <  NB501016:230:HFVJLAFXY:2:21209:21948:16925/151‑1 (MQ=60)
                                                                                                                                                        GCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAG        <  NB501016:230:HFVJLAFXY:2:21311:17816:18473/151‑1 (MQ=60)
                                                                                                                                                              AACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAacagaagatgcgcttctgcggt  >  NB501016:230:HFVJLAFXY:4:21503:21585:5412/1‑129 (MQ=60)
                                                                                                                                                              |                                                                                                                                                      
CGCCGCTGCTCCCGCAACAGAAAGCGCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAA‑‑‑‑‑‑‑‑GCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATT  >  NC_000913/2721074‑2721374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: