Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F36 I1 R1 22 37.6 1496218 97.1% 1452827 127.7

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,721,243 G→A G431R (GGA→AGA)  pka → protein lysine acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,721,2430GA100.0% 152.3 / NA 43G431R (GGA→AGA) pkaprotein lysine acetyltransferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (23/20);  total (23/20)

AGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGG  >  NC_000913/2721104‑2721384
                                                                                                                                           |                                                                                                                                             
aGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCa                                                                                                                                      <  8:111473/149‑1 (MQ=255)
                 tAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTAt                                                                                                                            <  4:65918/142‑1 (MQ=255)
                 tAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTAt                                                                                                                            >  3:65918/1‑142 (MQ=255)
                                gcagcaAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCggtg                                                                                                       >  5:127210/1‑146 (MQ=255)
                                    caAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTAAGCGAAGCCCGGCTGCCGACCTACCGTACCCCGGAAAGAACCAt                                                                                                                                        >  6:186223/1‑111 (MQ=255)
                                    caAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCATCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCGGACCTACCGTACCCCGGAAAGAACCAt                                                                                                                                        <  5:186223/111‑1 (MQ=255)
                                                    cTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGa                                                                                  <  5:6489/149‑1 (MQ=255)
                                                         gAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTa                                                                                                                             <  6:169470/101‑1 (MQ=255)
                                                         gAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTa                                                                                                                             >  5:169470/1‑101 (MQ=255)
                                                               gTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGt                                                                       >  5:116036/1‑149 (MQ=255)
                                                                          agatctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAAt                                                            <  5:4468/145‑1 (MQ=255)
                                                                           ctcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGc                                                                         >  5:4026/1‑135 (MQ=255)
                                                                           ctcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGc                                                                         <  6:4026/135‑1 (MQ=255)
                                                                           ctcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATc                                                           >  4:155113/1‑149 (MQ=255)
                                                                            tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCt                                                          >  1:44277/1‑149 (MQ=255)
                                                                            tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCt                                                          >  7:71269/1‑149 (MQ=255)
                                                                            tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTGTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCt                                                          >  4:67381/1‑149 (MQ=255)
                                                                              ctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGTGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCt                                                          <  6:127210/147‑1 (MQ=255)
                                                                               tcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTgcc                                                       >  7:10561/1‑147 (MQ=255)
                                                                                 gCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAAt                                                            >  6:4468/1‑142 (MQ=255)
                                                                                   aaGAGGCACGACGTTTATTCGGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCatat                                                                                                                      >  6:28733/1‑82 (MQ=255)
                                                                                   aaGAGGCACGACGTTTATTCGGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCatat                                                                                                                      <  5:28733/82‑1 (MQ=255)
                                                                                     gagGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCaa                                                 <  6:116036/149‑1 (MQ=255)
                                                                                       ggCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATa                                               <  2:44277/149‑1 (MQ=255)
                                                                                         cACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATAcc                                             >  3:60714/1‑149 (MQ=255)
                                                                                           cgacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGc                                           <  3:155113/149‑1 (MQ=255)
                                                                                            gacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTcc                                                   <  2:69236/140‑1 (MQ=255)
                                                                                            gacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTcc                                                   >  1:69236/1‑140 (MQ=255)
                                                                                                   aTTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAgcg                                    >  4:54783/1‑148 (MQ=255)
                                                                                                     tCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggtg                                                                                                                  <  7:75527/68‑1 (MQ=255)
                                                                                                     tCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggtg                                                                                                                  >  8:75527/1‑68 (MQ=255)
                                                                                                      cAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTCTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAt                                 <  3:67381/148‑1 (MQ=255)
                                                                                                       aGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATc                                                           <  2:147769/121‑1 (MQ=255)
                                                                                                       aGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATc                                                           >  1:147769/1‑121 (MQ=255)
                                                                                                           aaGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTg                           >  4:24069/1‑149 (MQ=255)
                                                                                                             gCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGtt                         <  3:54783/149‑1 (MQ=255)
                                                                                                                  gCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAg                                                                <  6:124834/105‑1 (MQ=255)
                                                                                                                       cGACCTACCGTACCCCGGAAAGAACCGTCACTGCTTTTATGCATAtggtg                                                                                                                  >  6:128568/1‑50 (MQ=255)
                                                                                                                       cGACCTACCGTACCCCGGAAAGAACCGTCACTGCTTTTATGCATAtggtg                                                                                                                  <  5:128568/50‑1 (MQ=255)
                                                                                                                               cGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCg        >  8:155421/1‑148 (MQ=255)
                                                                                                                                    cccGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACa                   >  4:164342/1‑132 (MQ=255)
                                                                                                                                    cccGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACa                   <  3:164342/132‑1 (MQ=255)
                                                                                                                                    cccGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAgggg  >  5:119727/1‑149 (MQ=255)
                                                                                                                                           |                                                                                                                                             
AGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGG  >  NC_000913/2721104‑2721384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 

GATK/CNVnator alignment

BRESEQ :: bam2aln output
GTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGC  >  NC_000913/2721120‑2721385
                                                                                                                           |                                                                                                                                              
GTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATG                                                                                                                            >  NB501016:228:HFK2FAFXY:2:11304:19855:19037/1‑144 (MQ=60)
               CGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGTGT                                                                                                       >  NB501016:228:HFK2FAFXY:3:21411:18460:13382/1‑150 (MQ=60)
                   GCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCATCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCGGACCTACCGTACCCCGGAAAGAACCATC                                                                                                                                        <  NB501016:228:HFK2FAFXY:3:21610:17093:2420/113‑1 (MQ=60)
                                   GCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAA                                                                                  <  NB501016:228:HFK2FAFXY:3:11403:2772:8296/151‑1 (MQ=60)
                                        CGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTAT                                                                                                                             >  NB501016:228:HFK2FAFXY:3:21603:17192:14892/1‑103 (MQ=60)
                                              GGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTT                                                                       >  NB501016:228:HFK2FAFXY:3:21407:14797:9930/1‑151 (MQ=60)
                                                         cagatCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATC                                                            <  NB501016:228:HFK2FAFXY:3:11402:12472:13001/146‑1 (MQ=60)
                                                          ACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCG                                                                         >  NB501016:228:HFK2FAFXY:3:11402:24107:10332/1‑137 (MQ=60)
                                                           CTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTG                                                          >  NB501016:228:HFK2FAFXY:1:11203:17954:13116/1‑151 (MQ=60)
                                                           CTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTG                                                          >  NB501016:228:HFK2FAFXY:4:11606:19028:10897/1‑151 (MQ=60)
                                                              CTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGCCT                                                       >  NB501016:228:HFK2FAFXY:4:11405:3551:6131/1‑151 (MQ=60)
                                                                  CAAGAGGCACGACGTTTATTCGGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATG                                                                                                                      <  NB501016:228:HFK2FAFXY:3:11411:16784:14824/84‑1 (MQ=60)
                                                                        GCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCC                                             >  NB501016:228:HFK2FAFXY:2:11302:10756:17183/1‑151 (MQ=60)
                                                                          ACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCA                                           <  NB501016:228:HFK2FAFXY:2:21306:18051:13052/151‑1 (MQ=60)
                                                                           CGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCA                                                   >  NB501016:228:HFK2FAFXY:1:11212:26013:3235/1‑142 (MQ=60)
                                                                                    TTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGG                                                                                                                  <  NB501016:228:HFK2FAFXY:4:11608:24141:9081/70‑1 (MQ=60)
                                                                                     TCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTCTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATC                                 <  NB501016:228:HFK2FAFXY:2:11305:20333:11226/150‑1 (MQ=60)
                                                                                      CAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCT                                                           >  NB501016:228:HFK2FAFXY:1:21202:23394:13047/1‑123 (MQ=60)
                                                                                            AGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTG                         <  NB501016:228:HFK2FAFXY:2:11212:3260:9853/151‑1 (MQ=60)
                                                                                                 GGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAgatcggaagagcacacgtctgaatccagtcacgaattcgtagc                    >  NB501016:228:HFK2FAFXY:3:21410:20397:15337/1‑108 (MQ=60)
                                                                                                      CCGACCTACCGTACCCCGGAAAGAACCGTCACTGCTTTTATGCATATGGTGG                                                                                                                  <  NB501016:228:HFK2FAFXY:3:21412:3212:4627/52‑1 (MQ=60)
                                                                                                                   CCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCagatgaagagcacacgtctgaactccagtcacgaattcgtatctcgtatgccgtcttctgcttgaaaaaaa   >  NB501016:228:HFK2FAFXY:4:21403:15202:1957/1‑79 (MQ=60)
                                                                                                                   CCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGC  >  NB501016:228:HFK2FAFXY:3:21408:16635:17674/1‑151 (MQ=60)
                                                                                                                   CCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAG                   <  NB501016:228:HFK2FAFXY:2:21310:10086:6338/134‑1 (MQ=60)
                                                                                                                           |                                                                                                                                              
GTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGC  >  NC_000913/2721120‑2721385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: