Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F68 I1 R1
|
24 |
78.6 |
3085910 |
98.1% |
3027277 |
142.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,721,243 |
G→A |
G431R (GGA→AGA) |
pka → |
protein lysine acetyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,721,243 | 0 | G | A | 98.8%
| 276.0
/ NA
| 80 | G431R (GGA→AGA) | pka | protein lysine acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (43/36); minor base T (0/1); total (43/37) |
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
CGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGC > NC_000913/2721100‑2721385
|
cgcAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAAcc < 7:26327/149‑1 (MQ=255)
aTTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCttt > 7:367072/1‑149 (MQ=255)
aTTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCttt > 1:201950/1‑149 (MQ=255)
aTTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCttt > 4:320317/1‑149 (MQ=255)
aTTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCtt < 3:226246/148‑1 (MQ=255)
gAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTCCCGTACCCCGGAAAGAACCATCACTGCTTTTAt > 2:52387/1‑149 (MQ=255)
aaGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATg < 7:177201/149‑1 (MQ=255)
aaGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATg < 3:173067/149‑1 (MQ=255)
aaGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTCGTGCGGCGAGCACTCATCGCAAGAGGCACGACGTTAATTCAGCGAAGCCGGGCTGCCGACCTACAGTACCCAGGAAAGAACCATCACTGCTTTTATg > 5:224447/1‑149 (MQ=255)
aaGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggt < 8:58740/149‑1 (MQ=255)
aaGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggt > 7:236361/1‑149 (MQ=255)
aaGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggt < 1:304433/149‑1 (MQ=255)
aGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggtg < 3:320317/149‑1 (MQ=255)
aGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggtg < 8:367072/149‑1 (MQ=255)
aGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggtg < 2:201950/149‑1 (MQ=255)
aGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggtg < 3:336652/149‑1 (MQ=255)
aGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtggtg < 5:40607/149‑1 (MQ=255)
atcatcCCCGCAGCAAATATGTCTCTTTGCTGAATAACTGGTTCGTCGAGCAATCCTCGCAAGAGTCACGAAGTTTATTCAGCGAAGCCGGGCTGCCGACATACATTACCCCGGAAAGAACCATCAATGCTTTTATGCATATGGTTGAg > 2:381285/1‑149 (MQ=255)
ccGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGc > 5:38719/1‑149 (MQ=255)
ccGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGc > 1:302037/1‑149 (MQ=255)
gcaAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAAt < 1:52387/149‑1 (MQ=255)
gcaAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAAt < 8:330892/149‑1 (MQ=255)
atatGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAg > 1:5040/1‑148 (MQ=255)
tctcTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGAAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCaa < 2:42880/149‑1 (MQ=255)
tctTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAAc > 4:315675/1‑148 (MQ=255)
aCGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAAc > 6:42739/1‑149 (MQ=255)
aCGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAAc < 2:29993/149‑1 (MQ=255)
aCGAACTGGGGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAAc < 6:257473/149‑1 (MQ=255)
gTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGc < 2:5040/147‑1 (MQ=255)
cgAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCa > 7:356373/1‑149 (MQ=255)
ctcctcGCAAGAGGCACGACGTTTATTCTGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTTCGCGAAACGCCGGCGTTGCCCAGCAATc < 7:383663/149‑1 (MQ=255)
ctcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGCAGCAACTACGCGAAACGCCGGCGTTGCCCCGCAATc > 1:94265/1‑149 (MQ=255)
ctcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATc < 4:106551/149‑1 (MQ=255)
tcctcGCAAGCGGCACGACTTTTATTCATCGAAGCCGGGCTGCCGACATACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATAtgg < 8:180639/91‑1 (MQ=255)
tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCt > 7:226531/1‑149 (MQ=255)
tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCt > 1:47670/1‑149 (MQ=255)
tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGATTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCt > 2:343641/1‑149 (MQ=255)
tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACAGTACCACGGAAAGAACCATCACTGCTTTTATGCATAtgg > 7:180639/1‑91 (MQ=255)
tcctcGCAAGAGGCACGACGTTTATTCAGCGAAGACGGGATGCCGAACTACCGTACCACGCAAAGACCAATAACTCCTTTTATGCATATGGTGGAGTACCGGCGGAATCTGAAGCAACTCCGCGAAACGCCGGAGTTGCCCAGCAATCt > 7:272062/1‑149 (MQ=255)
ctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGa > 1:149597/1‑149 (MQ=255)
ctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGa > 5:114239/1‑149 (MQ=255)
ctcGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAAGCTGa > 5:117386/1‑149 (MQ=255)
gCAAGAGGCACGCCGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAACCGCCGGCGTTGCCCCGCAATCTGAcgt > 5:161247/1‑147 (MQ=255)
gCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGAc < 5:42739/147‑1 (MQ=255)
gCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACtt < 3:315675/149‑1 (MQ=255)
gCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACt < 6:38719/148‑1 (MQ=255)
gagGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCaa > 3:71001/1‑149 (MQ=255)
cACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATAcc > 7:283807/1‑149 (MQ=255)
acgacgTTTATTCAGTGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCAGACTTCCAATACCg > 7:169112/1‑149 (MQ=255)
acgacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGa > 1:10150/1‑98 (MQ=255)
acgacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGa < 2:10150/98‑1 (MQ=255)
acgacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCg < 8:283807/149‑1 (MQ=255)
gacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGTAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCa < 3:105406/149‑1 (MQ=255)
gacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGccc > 8:360471/1‑125 (MQ=255)
gacgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGccc < 7:360471/125‑1 (MQ=255)
acgTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAg < 5:339459/149‑1 (MQ=255)
gTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGAGTTCCAATACCGCAg > 8:334172/1‑147 (MQ=255)
gTTTATTCAGCGAAGACGTGCTGCAGACCTACCGTACCCCGTAAAGAACCATCACTGCTTTTATGCATATGGTTGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGaa < 1:381285/149‑1 (MQ=255)
tATGCAGTGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCAGACTTCCAATACCGCAGAAgc < 8:169112/148‑1 (MQ=255)
tCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCATAAGCAACTACGCGAAACg < 4:159869/104‑1 (MQ=255)
tCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACg > 3:159869/1‑104 (MQ=255)
aGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGCACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAtct > 1:106938/1‑149 (MQ=255)
aGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAtct > 3:127529/1‑149 (MQ=255)
aGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAtct > 3:190507/1‑149 (MQ=255)
aGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCCGCGTAATCAGCAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAtc > 1:119246/1‑148 (MQ=255)
gAAGGCGGGCTGCCGACCTACCGTACCCCTGAAAGAACCTTCACTGCTTTTATGGATATGGTGGATTACCGGCGTAATCAGAAGCAACTAAGCGAAACGCCGGCTTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAtcttct < 5:364228/149‑1 (MQ=255)
gAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCAtcttct > 6:192510/1‑149 (MQ=255)
aaGCCGGGCTGCCGACCTACAGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTg < 8:236361/149‑1 (MQ=255)
aGCCGGGCTGGCGACCTCCCGTACCCCGGAAAGAACCATCACTGCTTTAAGGCATTTGTTGGAGGACCGGCGTAATCAGAAGCAACTACGCGATACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCATAAGCGCATCTTCTGt < 6:224447/149‑1 (MQ=255)
aGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGCCTTCCAATACCGCAGAAGCGCATCTTCTGt > 4:247206/1‑149 (MQ=255)
ccggCCGCCGACCTCCCGTACCCCCGAATCACCCATCCCGGCTTTTCTGCATCTGGCGGCGGCCCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGc < 2:302037/147‑1 (MQ=255)
gCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCaa > 2:366733/1‑148 (MQ=255)
tGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAg > 5:322838/1‑149 (MQ=255)
gCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAgg < 1:366733/149‑1 (MQ=255)
cTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTg < 4:71001/149‑1 (MQ=255)
aCCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGcc > 3:319287/1‑149 (MQ=255)
ccccGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAggg > 6:318743/1‑149 (MQ=255)
cccGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAgggg > 3:1507/1‑149 (MQ=255)
cGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGc > 3:301778/1‑148 (MQ=255)
cGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGc > 8:232764/1‑148 (MQ=255)
|
CGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGC > NC_000913/2721100‑2721385
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCTACGT > NC_000913/2721099‑2721390
|
GCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCA < NB501016:230:HFVJLAFXY:4:11405:7243:13686/151‑1 (MQ=60)
AATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTT > NB501016:230:HFVJLAFXY:4:21608:12656:1857/1‑151 (MQ=60)
AATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTT > NB501016:230:HFVJLAFXY:1:21101:7160:7196/1‑151 (MQ=60)
AATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTT < NB501016:230:HFVJLAFXY:2:21109:13151:11512/150‑1 (MQ=60)
GAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGC < NB501016:230:HFVJLAFXY:4:11608:8402:9753/151‑1 (MQ=60)
GAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGC < NB501016:230:HFVJLAFXY:2:11311:12795:2470/151‑1 (MQ=60)
GAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTCGTGCGGCGAGCACTCATCGCAAGAGGCACGACGTTAATTCAGCGAAGCCGGGCTGCCGACCTACAGTACCCAGGAAAGAACCATCACTGCTTTTATGC > NB501016:230:HFVJLAFXY:3:21406:2498:11609/1‑151 (MQ=60)
AAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTG < NB501016:230:HFVJLAFXY:1:21207:7579:12513/151‑1 (MQ=60)
AAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTG > NB501016:230:HFVJLAFXY:4:21407:2636:8230/1‑151 (MQ=60)
AAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGG < NB501016:230:HFVJLAFXY:3:11408:11309:15483/151‑1 (MQ=60)
AAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGG < NB501016:230:HFVJLAFXY:2:21307:21479:16759/151‑1 (MQ=60)
AAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGG < NB501016:230:HFVJLAFXY:2:21304:19421:15063/151‑1 (MQ=60)
CCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCG > NB501016:230:HFVJLAFXY:3:11408:4601:8598/1‑151 (MQ=60)
CCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCG > NB501016:230:HFVJLAFXY:1:21207:11858:4158/1‑151 (MQ=60)
AGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATC < NB501016:230:HFVJLAFXY:1:11109:11592:13707/151‑1 (MQ=60)
AATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGA > NB501016:230:HFVJLAFXY:1:11101:12693:16179/1‑150 (MQ=60)
GCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCCG > NB501016:230:HFVJLAFXY:4:21605:16351:19940/1‑151 (MQ=60)
ACTCCTCGCAAGAGGCACGACGTTTATTCTGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTTCGCGAAACGCCGGCGTTGCCCAGCAATCT < NB501016:230:HFVJLAFXY:4:21611:2977:5198/151‑1 (MQ=60)
ACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGCAGCAACTACGCGAAACGCCGGCGTTGCCCCGCAATCT > NB501016:230:HFVJLAFXY:1:11205:9200:7309/1‑151 (MQ=60)
CTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTG > NB501016:230:HFVJLAFXY:1:11108:9825:16878/1‑151 (MQ=60)
CTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTG > NB501016:230:HFVJLAFXY:4:21405:10193:13399/1‑151 (MQ=60)
CTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACAGTACCACGGAAAGAACCATCACTGCTTTTATGCATATGGT > NB501016:230:HFVJLAFXY:4:11609:1663:3541/1‑93 (MQ=60)
CTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGACGGGATGCCGAACTACCGTACCACGCAAAGACCAATAACTCCTTTTATGCATATGGTGGAGTACCGGCGGAATCTGAAGCAACTCCGCGAAACGCCGGAGTTGCCCAGCAATCTG > NB501016:230:HFVJLAFXY:4:21501:16150:17849/1‑151 (MQ=60)
CCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGAC > NB501016:230:HFVJLAFXY:1:11303:4882:16088/1‑151 (MQ=60)
CCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGAC > NB501016:230:HFVJLAFXY:3:11510:18581:12502/1‑151 (MQ=60)
CCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAAGCTGAC > NB501016:230:HFVJLAFXY:3:11511:2568:5669/1‑151 (MQ=60)
CGCAAGAGGCACGCCGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAACCGCCGGCGTTGCCCCGCAATCTGACGTC > NB501016:230:HFVJLAFXY:3:11606:24650:19570/1‑151 (MQ=60)
CGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTC < NB501016:230:HFVJLAFXY:2:21303:10561:17129/151‑1 (MQ=60)
CGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACT < NB501016:230:HFVJLAFXY:3:11409:4772:4064/149‑1 (MQ=60)
AGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAACCGCCGGCGTTGCCCAGCAATCTGACTTCCAAT > NB501016:230:HFVJLAFXY:2:11203:9803:8839/1‑151 (MQ=60)
GCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCG > NB501016:230:HFVJLAFXY:4:21504:14300:7261/1‑151 (MQ=60)
CACGACGTTTATTCAGTGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCAGACTTCCAATACCGC > NB501016:230:HFVJLAFXY:4:11606:22765:19008/1‑151 (MQ=60)
CACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAA > NB501016:230:HFVJLAFXY:1:11102:10632:12458/1‑100 (MQ=60)
CGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGTAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAG < NB501016:230:HFVJLAFXY:2:11210:19402:9452/151‑1 (MQ=60)
CGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCA < NB501016:230:HFVJLAFXY:4:21606:11020:15650/127‑1 (MQ=60)
GACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGA < NB501016:230:HFVJLAFXY:3:21604:12364:15167/151‑1 (MQ=60)
CGTTTATTCAGCGAAGACGTGCTGCAGACCTACCGTACCCCGTAAAGAACCATCACTGCTTTTATGCATATGGTTGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAG < NB501016:230:HFVJLAFXY:1:21309:23303:20235/151‑1 (MQ=60)
TTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGC > NB501016:230:HFVJLAFXY:2:11308:25741:15114/1‑106 (MQ=60)
CAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGCACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTT > NB501016:230:HFVJLAFXY:1:11207:16336:15779/1‑151 (MQ=60)
CAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTT > NB501016:230:HFVJLAFXY:2:21102:1426:6080/1‑151 (MQ=60)
CAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTT > NB501016:230:HFVJLAFXY:2:11302:17442:15430/1‑151 (MQ=60)
CAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCCGCGTAATCAGCAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCA > NB501016:230:HFVJLAFXY:1:11210:16045:3398/1‑150 (MQ=60)
CGAAGGCGGGCTGCCGACCTACCGTACCCCTGAAAGAACCTTCACTGCTTTTATGGATATGGTGGATTACCGGCGTAATCAGAAGCAACTAAGCGAAACGCCGGCTTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTG < NB501016:230:HFVJLAFXY:3:21609:3324:3626/151‑1 (MQ=60)
CTGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGG > NB501016:230:HFVJLAFXY:3:21601:19734:17710/1‑151 (MQ=60)
GGCCGACCTACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGC < NB501016:230:HFVJLAFXY:1:21307:24928:7532/151‑1 (MQ=60)
TACCGTACCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCG > NB501016:230:HFVJLAFXY:2:21304:9583:11482/1‑151 (MQ=60)
CCCCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGC > NB501016:230:HFVJLAFXY:2:11101:10941:7073/1‑151 (MQ=60)
CCGGAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCT > NB501016:230:HFVJLAFXY:2:21301:14024:4342/1‑150 (MQ=60)
GAAAGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCTACGT > NB501016:230:HFVJLAFXY:3:11608:9537:14277/1‑151 (MQ=60)
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GCGCAAGTATTAATTGAAGCGGTAAAGCATCATCCCCGCAGCAAATATGTCTCTTTGCTGACGAACTGGTGCGGCGAGCACTCCTCGCAAGAGGCACGACGTTTATTCAGCGAAGCCGGGCTGCCGACCTACCGTACCCCGGAAGGAACCATCACTGCTTTTATGCATATGGTGGAGTACCGGCGTAATCAGAAGCAACTACGCGAAACGCCGGCGTTGCCCAGCAATCTGACTTCCAATACCGCAGAAGCGCATCTTCTGTTGCAACAGGCGATTGCCGAAGGGGCTACGT > NC_000913/2721099‑2721390
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
