Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,751,393 |
G→A |
T154T (ACC→ACT) |
b1673 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,751,393 | 0 | G | A | 98.6%
| 507.8
/ ‑3.8
| 144 | T154T (ACC→ACT) | b1673 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base A (75/67); total (77/67) |
| Fisher's exact test for biased strand distribution p-value = 4.99e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.32e-01 |
Only 100 of 146 total aligned reads displayed.
GCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAAT > NC_000913/1751303‑1751482
|
gccgcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGt < 1:2966639/93‑1 (MQ=255)
gcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCaa > 1:891518/1‑93 (MQ=255)
gcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCaa > 2:1958349/1‑93 (MQ=255)
gcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCaa > 2:2122683/1‑93 (MQ=255)
gcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCaa > 2:4442770/1‑93 (MQ=255)
gcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCaa < 1:2018498/93‑1 (MQ=255)
gcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCaa > 2:4442769/1‑93 (MQ=255)
cTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAAt < 2:1664491/93‑1 (MQ=255)
tgGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGa > 1:3916965/1‑93 (MQ=255)
ggTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGAc > 1:2020205/1‑93 (MQ=255)
gTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACa > 2:4602950/1‑93 (MQ=255)
ttACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACaa > 1:1640585/1‑93 (MQ=255)
cGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAtt < 1:1538683/93‑1 (MQ=255)
cGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAtt < 1:2843431/93‑1 (MQ=255)
ggCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAttt < 1:1988658/93‑1 (MQ=255)
ggCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAttt < 2:3903359/93‑1 (MQ=255)
ggCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAttt < 2:1138291/93‑1 (MQ=255)
cTATTCAACGTGCGAGTGAGATGAACAAGGTTTGCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATttct < 2:2276297/93‑1 (MQ=255)
tATTCAACGTGCCAGCGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGACGCCACACAGGTTTCCGGACTGGTCAATCGACAAATttctc > 2:2862983/1‑92 (MQ=255)
tATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATttctt > 2:3652139/1‑93 (MQ=255)
aaCGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCcgtc > 2:2311528/1‑93 (MQ=255)
aaCGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCcgtc > 1:4395403/1‑93 (MQ=255)
cgtGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCcgtcgt < 1:1354311/91‑1 (MQ=255)
gtGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGtt > 2:2313079/2‑93 (MQ=255)
gCCAGAGAGATGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgc < 2:466153/93‑1 (MQ=255)
agagagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgcgcg < 1:2241063/93‑1 (MQ=255)
agagagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgcgcg > 1:4008634/1‑93 (MQ=255)
gagagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgcgcgc > 2:2850233/1‑93 (MQ=255)
gagagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgcgcgc > 2:4717732/1‑93 (MQ=255)
gagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGcgcgcgc > 2:1960028/1‑92 (MQ=255)
gagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTcc > 1:646673/1‑93 (MQ=255)
gagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTcc < 2:3531638/93‑1 (MQ=255)
gagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTcc > 1:752397/1‑93 (MQ=255)
ggAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCt < 1:1254191/93‑1 (MQ=255)
aaCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCttt > 1:2543624/1‑93 (MQ=255)
aaCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCttt < 1:3185624/93‑1 (MQ=255)
aCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCtttt > 1:2478577/1‑93 (MQ=255)
aCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCtttt > 2:430846/1‑93 (MQ=255)
aCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCtttt > 1:299655/1‑93 (MQ=255)
cAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTc > 1:1498007/1‑93 (MQ=255)
aaGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTcc > 2:3994679/1‑93 (MQ=255)
aaGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGGTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTcc > 1:1033702/1‑93 (MQ=255)
aGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTccc > 2:898302/1‑93 (MQ=255)
ggTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTcccc < 2:4687147/93‑1 (MQ=255)
ggTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTcccc > 2:2543873/1‑93 (MQ=255)
gTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCa < 1:1647256/93‑1 (MQ=255)
gTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCa < 2:4560062/93‑1 (MQ=255)
gTTTCCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCa < 2:2002008/93‑1 (MQ=255)
ttttCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCAt > 2:2201089/1‑93 (MQ=255)
ttttCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCAt > 2:3937415/1‑93 (MQ=255)
tcccccAGCCTGACCAAAAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATaa < 1:4094051/91‑1 (MQ=255)
tCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAg < 1:3670667/93‑1 (MQ=255)
ccccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGa > 2:1765212/1‑93 (MQ=255)
cccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaa > 1:3848795/1‑93 (MQ=255)
cccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaa > 1:1733835/1‑93 (MQ=255)
ccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaaa < 1:4134103/93‑1 (MQ=255)
cAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAAt < 2:3905417/93‑1 (MQ=255)
aGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATc < 1:2334912/93‑1 (MQ=255)
aGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATc > 1:2284322/1‑93 (MQ=255)
aGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATc < 1:4035957/93‑1 (MQ=255)
aGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATc < 1:4130190/93‑1 (MQ=255)
gCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCg > 2:3112159/1‑93 (MQ=255)
gCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCg < 1:2739436/93‑1 (MQ=255)
cTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTGCCTTTTCCCCATAAGAAATCGGc > 2:3232806/1‑93 (MQ=255)
tGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCt > 1:4143163/1‑93 (MQ=255)
ggccAAGAGCCGCCACACAGGTTTCCGGACTAGTCAAGCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtt < 1:1162787/91‑1 (MQ=255)
gACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtt < 1:3144507/93‑1 (MQ=255)
gACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtt > 2:3625255/1‑93 (MQ=255)
aCCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCttt < 1:3871910/93‑1 (MQ=255)
ccAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtttt < 1:2825060/93‑1 (MQ=255)
ccAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtttt > 2:4204745/1‑93 (MQ=255)
ccAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtttt < 2:680080/93‑1 (MQ=255)
cAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCttttt > 1:3105597/1‑93 (MQ=255)
aaTAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTc < 1:4388777/93‑1 (MQ=255)
tAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCa < 2:266433/93‑1 (MQ=255)
tAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCa > 1:520464/1‑93 (MQ=255)
aGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAg > 1:1741187/1‑93 (MQ=255)
aGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAg < 1:4312492/93‑1 (MQ=255)
ccgccACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGc < 2:3046771/93‑1 (MQ=255)
ccgccACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGc < 2:478496/93‑1 (MQ=255)
ccgccACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGc > 2:1376056/1‑93 (MQ=255)
ccACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTaa < 2:4351490/93‑1 (MQ=255)
cacacaGGTTTCCGGACTAGTCCATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAAc < 1:3239454/93‑1 (MQ=255)
cacacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAAc > 2:2744887/1‑93 (MQ=255)
cacacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAAc > 2:2195427/1‑93 (MQ=255)
cacacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAAc > 2:4179224/1‑93 (MQ=255)
cacacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAAc < 1:8365/93‑1 (MQ=255)
acacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACt > 1:3562059/1‑93 (MQ=255)
acacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACt > 1:4694042/1‑93 (MQ=255)
cacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACtt < 1:1145051/93‑1 (MQ=255)
acaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACttt > 2:3088865/1‑93 (MQ=255)
caGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTg < 1:2407261/93‑1 (MQ=255)
aGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGt > 1:4419039/1‑93 (MQ=255)
ggTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTc < 2:3595137/93‑1 (MQ=255)
ggTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTc < 2:3277039/93‑1 (MQ=255)
ggTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTc < 2:259714/93‑1 (MQ=255)
gTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCa > 2:4316972/1‑93 (MQ=255)
gACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTaa < 2:2087507/93‑1 (MQ=255)
gACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTaa < 2:893882/93‑1 (MQ=255)
aCTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAAt < 2:646673/93‑1 (MQ=255)
|
GCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAAT > NC_000913/1751303‑1751482
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCTTC > NC_000913/1751301‑1751486
|
CCGCCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAG > SRR4302544.1853837/1‑94 (MQ=60)
GCCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTC < SRR4302544.2995103/94‑1 (MQ=60)
CGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAA > SRR4302544.900345/1‑94 (MQ=60)
GCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAAT < SRR4302544.2038097/94‑1 (MQ=60)
GTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGA > SRR4302544.3955866/1‑94 (MQ=60)
TGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGAC > SRR4302544.2039813/1‑94 (MQ=60)
GTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAA > SRR4302544.1656751/1‑94 (MQ=60)
CGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTT < SRR4302544.1553971/94‑1 (MQ=60)
CGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTT < SRR4302544.2870876/94‑1 (MQ=60)
CGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTT > SRR4302544.4055706/1‑94 (MQ=60)
GGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTC < SRR4302544.2007963/94‑1 (MQ=60)
ATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCC < SRR4302544.1727880/94‑1 (MQ=60)
TTCAACGTGCCAGAGAGAGGAACAAGGTCTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCG > SRR4302544.394575/1‑94 (MQ=60)
CAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTC > SRR4302544.4439849/1‑94 (MQ=60)
AACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCG < SRR4302544.1656303/94‑1 (MQ=60)
CGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTT < SRR4302544.1367738/94‑1 (MQ=60)
CAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCG > SRR4302544.4048514/1‑94 (MQ=60)
AGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGC < SRR4302544.2262148/94‑1 (MQ=60)
AGAGGAACAAGTGTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCC < SRR4302544.2307955/94‑1 (MQ=60)
AGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCC > SRR4302544.759746/1‑94 (MQ=60)
AGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCC > SRR4302544.653060/1‑94 (MQ=60)
GGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTT < SRR4302544.1266529/94‑1 (MQ=60)
GGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTT > SRR4302544.4286743/1‑94 (MQ=60)
GAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTT > SRR4302544.2568043/1‑94 (MQ=60)
AACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTT > SRR4302544.302756/1‑94 (MQ=60)
AACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTT < SRR4302544.3215953/94‑1 (MQ=60)
AACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTT > SRR4302544.2502293/1‑94 (MQ=60)
ACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTC > SRR4302544.1512815/1‑94 (MQ=60)
CAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGGTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCC > SRR4302544.1043982/1‑94 (MQ=60)
GGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCC > SRR4302544.2583377/1‑94 (MQ=60)
GTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCAT < SRR4302544.1663505/94‑1 (MQ=60)
TCCCCCAGCCTGACCAAAAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAG < SRR4302544.4134785/94‑1 (MQ=60)
TCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGA < SRR4302544.3707278/94‑1 (MQ=60)
CCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAA > SRR4302544.1750829/1‑94 (MQ=60)
CCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAA > SRR4302544.3886993/1‑94 (MQ=60)
CCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAAT < SRR4302544.4175063/94‑1 (MQ=60)
CCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAAT < SRR4302544.628989/94‑1 (MQ=60)
CAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATC > SRR4302544.2305852/1‑94 (MQ=60)
CAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATC < SRR4302544.3209698/94‑1 (MQ=60)
CGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCG < SRR4302544.3520330/94‑1 (MQ=60)
AGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCG < SRR4302544.4171132/94‑1 (MQ=60)
AGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCG < SRR4302544.4076152/94‑1 (MQ=60)
AGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCG < SRR4302544.2357045/94‑1 (MQ=60)
AGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCG < SRR4302544.1914125/94‑1 (MQ=60)
GCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGG < SRR4302544.2765846/94‑1 (MQ=60)
CCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGC > SRR4302544.1183718/1‑94 (MQ=60)
CTGACCAATAGCGGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGGCGGTGCGGGCGTCCGTTTTCCCCACAAGAAAagggat > SRR4302544.4184179/1‑88 (MQ=60)
CTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCT > SRR4302544.4184178/1‑94 (MQ=60)
CTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCT > SRR4302544.244792/1‑94 (MQ=60)
GGCCAAGAGCCGCCACACAGGTTTCCGGACTAGTCAAGCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTT < SRR4302544.1174377/94‑1 (MQ=60)
GACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTT < SRR4302544.3174403/94‑1 (MQ=60)
ACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTT < SRR4302544.3910363/94‑1 (MQ=60)
CCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTT > SRR4302544.3135152/1‑94 (MQ=60)
CCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTT < SRR4302544.2852354/94‑1 (MQ=60)
CAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTC > SRR4302544.1511408/1‑94 (MQ=60)
AATGGCCGCCACACAGGTTGCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCC < SRR4302544.4433203/94‑1 (MQ=60)
AATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCC < SRR4302544.4433202/94‑1 (MQ=60)
ATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCA > SRR4302544.525609/1‑94 (MQ=60)
TAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAG > SRR4302544.3733881/1‑94 (MQ=60)
TAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAG > SRR4302544.1758238/1‑94 (MQ=60)
AGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGG > SRR4302544.4150776/1‑94 (MQ=60)
AGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGG < SRR4302544.4356436/94‑1 (MQ=60)
CACACAGGTTTCCGGACTAGTCCATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACT < SRR4302544.3270460/94‑1 (MQ=60)
CACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACT > SRR4302544.3596206/1‑94 (MQ=60)
CACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACT > SRR4302544.4740396/1‑94 (MQ=60)
CACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACT < SRR4302544.8441/94‑1 (MQ=60)
CACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTT < SRR4302544.1156441/94‑1 (MQ=60)
CACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTT < SRR4302544.4640079/94‑1 (MQ=60)
CACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTT > SRR4302544.2120117/1‑94 (MQ=60)
CAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGT > SRR4302544.4463635/1‑94 (MQ=60)
CAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGT < SRR4302544.2430124/94‑1 (MQ=60)
GGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCA > SRR4302544.3023999/1‑94 (MQ=60)
TTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCT < SRR4302544.794245/94‑1 (MQ=60)
GACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAAT < SRR4302544.2862128/94‑1 (MQ=60)
CTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCT < SRR4302544.2563100/94‑1 (MQ=60)
CTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCT < SRR4302544.97842/94‑1 (MQ=60)
CTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCT > SRR4302544.995098/1‑94 (MQ=60)
AGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCTTC > SRR4302544.3335138/1‑94 (MQ=60)
AGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCTTC > SRR4302544.3043256/1‑94 (MQ=60)
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CCGCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCTTC > NC_000913/1751301‑1751486
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
