Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,751,393 |
G→A |
T154T (ACC→ACT) |
b1673 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,751,393 | 0 | G | A | 99.6%
| 857.3
/ NA
| 229 | T154T (ACC→ACT) | b1673 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (105/123); minor base C (1/0); total (106/123) |
| Fisher's exact test for biased strand distribution p-value = 4.63e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 235 total aligned reads displayed.
GCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAA > NC_000913/1751303‑1751481
|
ccgcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTc > 2:6069583/1‑93 (MQ=255)
ccgcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTc > 1:4540759/1‑93 (MQ=255)
gcTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCaa > 2:3657180/1‑93 (MQ=255)
tgtgGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATc > 1:1219032/1‑93 (MQ=255)
tgtgGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATc < 1:5587476/93‑1 (MQ=255)
tgtgGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGGTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATc > 1:1659556/1‑93 (MQ=255)
gtgGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCAGCCACACAGGTTTCCGGACTAGTCAATCg > 2:4630529/1‑93 (MQ=255)
gtgGTTACGGCTATTCAACGTGACAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCg > 2:5788375/1‑93 (MQ=255)
gTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACa < 2:3211773/93‑1 (MQ=255)
gTTACGGCTATTCAACGTCCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACa < 1:5308536/93‑1 (MQ=255)
ttACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACaa < 2:613491/93‑1 (MQ=255)
tACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACaaa > 1:1600240/1‑93 (MQ=255)
aCGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAt < 2:6034703/93‑1 (MQ=255)
cGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAtt > 1:6028611/1‑93 (MQ=255)
cGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAAtt < 1:2207146/93‑1 (MQ=255)
gCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATttc < 2:5825569/93‑1 (MQ=255)
cTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATttct < 1:1576097/93‑1 (MQ=255)
aTTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATttcttc < 1:6230711/93‑1 (MQ=255)
aTTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATttcttc < 1:46867/93‑1 (MQ=255)
aTTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATttcttc < 1:1782102/93‑1 (MQ=255)
ttCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTcc < 2:2106646/93‑1 (MQ=255)
ttCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTcc < 2:2371359/93‑1 (MQ=255)
ttCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTcc < 1:4394132/93‑1 (MQ=255)
ttCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTcc < 2:6257473/93‑1 (MQ=255)
tCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTATTCcg < 2:3355121/93‑1 (MQ=255)
cAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCcgt < 2:3013120/93‑1 (MQ=255)
aaCGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCcgtc < 2:2908471/93‑1 (MQ=255)
cgtGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCcgtcgt < 1:2368808/91‑1 (MQ=255)
gtGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGtt > 1:5855099/2‑93 (MQ=255)
tGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTg > 2:5016291/1‑93 (MQ=255)
gCCAGAGATAGGAACAAGGATTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgc > 1:6560415/1‑93 (MQ=255)
ccAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgcg < 1:2778555/93‑1 (MQ=255)
agagagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgcgcg > 2:5605998/1‑93 (MQ=255)
gagagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTgcgcgc > 1:93795/1‑93 (MQ=255)
agtgagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGcgcgcg > 1:5376167/4‑93 (MQ=255)
gagagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGt > 2:3530212/1‑93 (MQ=255)
agagGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGTTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTc < 1:2887342/93‑1 (MQ=255)
agagGAACAAGGTTTTCCCCAGCATGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTc < 2:3174113/93‑1 (MQ=255)
gggAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTccc < 1:2588803/92‑1 (MQ=255)
agGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTccc > 2:4217127/1‑93 (MQ=255)
agGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTccc < 2:2707631/93‑1 (MQ=255)
agGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTccc < 1:3328542/93‑1 (MQ=255)
ggAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTTCGCGCGTCGCt > 1:3977537/1‑93 (MQ=255)
ggAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCt < 1:2579041/93‑1 (MQ=255)
gcaaCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCt < 1:1016702/91‑1 (MQ=255)
gAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCtt < 1:862068/93‑1 (MQ=255)
aaCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCttt < 2:896259/93‑1 (MQ=255)
aaCAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCttt < 1:4296239/93‑1 (MQ=255)
cAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTc < 2:370523/93‑1 (MQ=255)
aaGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTcc > 2:116996/1‑93 (MQ=255)
aaGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTcc > 2:5434494/1‑93 (MQ=255)
gTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCa < 2:1474165/93‑1 (MQ=255)
gTTTTCACCAGCCTGACCAATAGCAGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCa > 1:5559385/1‑93 (MQ=255)
ttttCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCAt < 2:1565524/93‑1 (MQ=255)
tttCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATa < 1:2439784/93‑1 (MQ=255)
ccccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGa > 2:3785800/1‑93 (MQ=255)
cccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaa < 1:1412911/93‑1 (MQ=255)
cccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaa < 2:3292283/93‑1 (MQ=255)
cccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaa < 2:1826259/93‑1 (MQ=255)
ccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaaa > 2:4909355/1‑93 (MQ=255)
ccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaaa > 1:5021092/1‑93 (MQ=255)
ccAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGaaa < 2:4854732/93‑1 (MQ=255)
aGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATc < 2:4604681/93‑1 (MQ=255)
aGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATc > 1:2651129/1‑93 (MQ=255)
gCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCg > 2:4387696/1‑93 (MQ=255)
gCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCg > 1:2273019/1‑93 (MQ=255)
ccTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCgg > 1:1721985/1‑93 (MQ=255)
cTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGc < 1:1088926/93‑1 (MQ=255)
cTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGc > 2:3519311/1‑93 (MQ=255)
cTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGc < 2:1913691/93‑1 (MQ=255)
tGACCAATAGCCGCCACACAGGTTTCCGGACTCGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATACGAAATCGGCt > 1:647468/1‑93 (MQ=255)
tGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCt > 1:3045438/1‑93 (MQ=255)
gACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtt < 2:4080649/93‑1 (MQ=255)
gACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtt > 1:5277467/1‑93 (MQ=255)
aCCAATAGCCGCCACACATGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCttt < 2:833587/93‑1 (MQ=255)
aCCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCttt < 1:4818762/93‑1 (MQ=255)
ccAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtttt < 1:4796973/93‑1 (MQ=255)
ccAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCtttt < 1:714777/93‑1 (MQ=255)
aaTAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTc > 2:3320585/1‑93 (MQ=255)
aTAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCACTTTTCCCCATAAGAAATCGGCTTTTTcc > 1:4970200/1‑93 (MQ=255)
tAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCa < 1:3601584/93‑1 (MQ=255)
tAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCa < 1:2760867/93‑1 (MQ=255)
aGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAg < 2:19967/93‑1 (MQ=255)
gccgccACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAgg < 2:4702337/93‑1 (MQ=255)
cgccACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCt < 2:4727512/93‑1 (MQ=255)
gccACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCCTCCCTTTTCCCACTAAGAAATCGGCTTTTTCCAGGCTa > 1:6677543/1‑93 (MQ=255)
cacacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAAc < 1:6165282/93‑1 (MQ=255)
acacaGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACt > 1:41507/1‑93 (MQ=255)
caGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTg < 2:2472928/93‑1 (MQ=255)
ggTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTTCAGGCTAACTTTGTc > 2:5729741/1‑93 (MQ=255)
ggTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTc < 2:5525206/93‑1 (MQ=255)
gctgccGGACTAGTCAATCGACAAATTGCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCa < 2:6436885/89‑1 (MQ=255)
ttCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATc < 2:6558851/93‑1 (MQ=255)
tCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCt < 1:6115189/93‑1 (MQ=255)
tCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCt < 2:4945252/93‑1 (MQ=255)
ccGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCtt < 1:4047138/93‑1 (MQ=255)
cGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCttt < 1:2044519/93‑1 (MQ=255)
gACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTTCAGGCTAACTTTGTCATCTTTaa > 1:5058031/1‑93 (MQ=255)
gACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTaa < 2:1629191/93‑1 (MQ=255)
gACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTaa < 1:5758140/93‑1 (MQ=255)
|
GCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAA > NC_000913/1751303‑1751481
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ACCGCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCTT > NC_000913/1751300‑1751485
|
ACCGCCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCACTAGCCGCCACACAGGATTCCGGACTA > SRR4302536.1569279/1‑94 (MQ=60)
ACCGCCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTA > SRR4302536.4843649/1‑94 (MQ=60)
CGCCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGT > SRR4302536.163028/1‑94 (MQ=60)
GCCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTC > SRR4302536.4676910/1‑94 (MQ=60)
CCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGTCGACACACAGGTTTCCGGACTAGTCA > SRR4302536.6786647/1‑94 (MQ=60)
CCGCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCA < SRR4302536.2961497/94‑1 (MQ=60)
CGCTGTGGATACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAA > SRR4302536.6550224/1‑94 (MQ=60)
GCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAAT < SRR4302536.4957579/94‑1 (MQ=60)
GCTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAAT < SRR4302536.4396316/94‑1 (MQ=60)
CTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATC < SRR4302536.6898358/94‑1 (MQ=60)
CTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATC > SRR4302536.1255641/1‑94 (MQ=60)
CTGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGGTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATC > SRR4302536.1707736/1‑94 (MQ=60)
TGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCG < SRR4302536.2998778/94‑1 (MQ=60)
TGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCG < SRR4302536.5753673/94‑1 (MQ=60)
TGTGGTTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCG < SRR4302536.5450043/94‑1 (MQ=60)
GTTACGGCTATTCAACGTCCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAA < SRR4302536.5466963/94‑1 (MQ=60)
TTACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAA > SRR4302536.1646956/1‑94 (MQ=60)
ACGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATT > SRR4302536.6208361/1‑94 (MQ=60)
CGGCTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTT < SRR4302536.2273791/94‑1 (MQ=60)
CTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTT > SRR4302536.185506/1‑94 (MQ=60)
CTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTT > SRR4302536.5508312/1‑94 (MQ=60)
CTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTT < SRR4302536.5901142/94‑1 (MQ=60)
CTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTT < SRR4302536.1622291/94‑1 (MQ=60)
CTATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTT > SRR4302536.1434824/1‑94 (MQ=60)
TATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTC < SRR4302536.2665437/94‑1 (MQ=60)
ATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCC < SRR4302536.1835963/94‑1 (MQ=60)
ATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCC < SRR4302536.6416354/94‑1 (MQ=60)
ATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCC > SRR4302536.588430/1‑94 (MQ=60)
ATTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCC < SRR4302536.48155/94‑1 (MQ=60)
TTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCG < SRR4302536.4525394/94‑1 (MQ=60)
TTCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCG > SRR4302536.2604424/1‑94 (MQ=60)
TCAACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGT < SRR4302536.5059883/94‑1 (MQ=60)
AACGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCG > SRR4302536.4860217/1‑94 (MQ=60)
CGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTT < SRR4302536.2440602/94‑1 (MQ=60)
CGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTT > SRR4302536.6029545/1‑94 (MQ=60)
CGTGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTT < SRR4302536.558903/94‑1 (MQ=60)
GTGCCAGAGAGAGGAACAAGGATTTCCCCAGCCTGACAAATAGCCGCCACACAGGGTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTG > SRR4302536.4799717/1‑94 (MQ=60)
TGCCAGAGATAGGAACAAGGATTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGC > SRR4302536.6755724/1‑94 (MQ=60)
GCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCG < SRR4302536.2388145/94‑1 (MQ=60)
CCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGC < SRR4302536.2861092/94‑1 (MQ=60)
CCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGC < SRR4302536.2774769/94‑1 (MQ=60)
AGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGC > SRR4302536.2852808/1‑94 (MQ=60)
AGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGC > SRR4302536.96292/1‑94 (MQ=60)
AGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGC < SRR4302536.175276/94‑1 (MQ=60)
AGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGC > SRR4302536.2109249/1‑94 (MQ=60)
GAGTGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCG > SRR4302536.5536554/1‑94 (MQ=60)
AGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGT > SRR4302536.6313907/1‑94 (MQ=60)
AGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGT > SRR4302536.2986804/1‑94 (MQ=60)
AGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGTTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCC < SRR4302536.2972507/94‑1 (MQ=60)
AGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCC < SRR4302536.4105475/94‑1 (MQ=60)
GGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCT < SRR4302536.2666562/94‑1 (MQ=60)
AGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTTCGCGCGTCGCT > SRR4302536.4095626/1‑94 (MQ=60)
AGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCT > SRR4302536.3139299/1‑94 (MQ=60)
AGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCT < SRR4302536.3427041/94‑1 (MQ=60)
GGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTT < SRR4302536.6409618/94‑1 (MQ=60)
GGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTT < SRR4302536.2656567/94‑1 (MQ=60)
GGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTT < SRR4302536.5146604/94‑1 (MQ=60)
GCAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTT < SRR4302536.1046762/94‑1 (MQ=60)
GAACAAGGTTTTCCCCAGCCTGACCATTAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTT < SRR4302536.1498955/94‑1 (MQ=60)
GAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTT < SRR4302536.887405/94‑1 (MQ=60)
AACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTT < SRR4302536.5593553/94‑1 (MQ=60)
AACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTT < SRR4302536.4424640/94‑1 (MQ=60)
CAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCC < SRR4302536.5735798/94‑1 (MQ=60)
AAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCC > SRR4302536.5264993/1‑94 (MQ=60)
GGTTTTCACCAGCCTGACCAATAGCAGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCA > SRR4302536.5724949/1‑94 (MQ=60)
GTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCAT > SRR4302536.825480/1‑94 (MQ=60)
GTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCAT > SRR4302536.2275241/1‑94 (MQ=60)
GTTTTCCCAAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCAT < SRR4302536.4603058/94‑1 (MQ=60)
TTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAA > SRR4302536.2055650/1‑94 (MQ=60)
TTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAA < SRR4302536.2513524/94‑1 (MQ=60)
TCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGA < SRR4302536.5227955/94‑1 (MQ=60)
CCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAA > SRR4302536.5204421/1‑94 (MQ=60)
CCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAA < SRR4302536.1454926/94‑1 (MQ=60)
CCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAA > SRR4302536.5171599/1‑94 (MQ=60)
CAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATC > SRR4302536.2730528/1‑94 (MQ=60)
CAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATC < SRR4302536.1410247/94‑1 (MQ=60)
CAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATC > SRR4302536.3571981/1‑94 (MQ=60)
CAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATC > SRR4302536.1054164/1‑94 (MQ=60)
AGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCG > SRR4302536.2341899/1‑94 (MQ=60)
GCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGG > SRR4302536.1771733/1‑94 (MQ=60)
GCCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGG > SRR4302536.3739181/1‑94 (MQ=60)
CCTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGC > SRR4302536.6070133/1‑94 (MQ=60)
CTGACCAATAGCCGCCACACAGGTTTCCGGACTCGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATACGAAATCGGCT > SRR4302536.666514/1‑94 (MQ=60)
CTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCT < SRR4302536.1121576/94‑1 (MQ=60)
CTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCT > SRR4302536.3134928/1‑94 (MQ=60)
CTGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCT < SRR4302536.2373890/94‑1 (MQ=60)
TGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTT < SRR4302536.933116/94‑1 (MQ=60)
TGACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTT > SRR4302536.5434747/1‑94 (MQ=60)
GACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTT < SRR4302536.3755404/94‑1 (MQ=60)
GACC‑ATAGCCGCCACACAGGGTTCCGGGCTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCCTTTCCCCATAAGAAATCTGCTTTT > SRR4302536.666574/1‑94 (MQ=60)
CACCAATAGCCGCCACACAGGTTTCCGCACTAGTCAATCGACAACTTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTT < SRR4302536.1003822/94‑1 (MQ=60)
ACCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTT < SRR4302536.4963772/94‑1 (MQ=60)
CCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTT < SRR4302536.179974/94‑1 (MQ=60)
CCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTT < SRR4302536.4941350/94‑1 (MQ=60)
CCAATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTT < SRR4302536.735679/94‑1 (MQ=60)
AATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCACTTTTCCCCATAAGAAATCGGCTTTTTCC > SRR4302536.5119503/1‑94 (MQ=60)
ATAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCA > SRR4302536.1669485/1‑94 (MQ=60)
TAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAG < SRR4302536.6003837/94‑1 (MQ=60)
TAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAG < SRR4302536.1691821/94‑1 (MQ=60)
TAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAG < SRR4302536.3709291/94‑1 (MQ=60)
TAGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAG < SRR4302536.2843003/94‑1 (MQ=60)
AGCCGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGG > SRR4302536.6535347/1‑94 (MQ=60)
CGNCACANNNNNTTCCGGACTAGTNNNTNNACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTA < SRR4302536.6310018/94‑1 (MQ=60)
CGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTA < SRR4302536.4813315/94‑1 (MQ=60)
CGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCCTCCCTTTTCCCACTAAGAAATCGGCTTTTTCCAGGCTA > SRR4302536.6875936/1‑94 (MQ=60)
CGCCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTACGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTA > SRR4302536.449918/1‑94 (MQ=60)
CCACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAAC > SRR4302536.6280822/1‑94 (MQ=60)
CACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACT < SRR4302536.4342554/94‑1 (MQ=60)
CACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACT > SRR4302536.42658/1‑94 (MQ=60)
CACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACT < SRR4302536.6348924/94‑1 (MQ=60)
ACACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTT > SRR4302536.2662626/1‑94 (MQ=60)
CACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTT < SRR4302536.6239552/94‑1 (MQ=60)
ACAGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTG > SRR4302536.6916275/1‑94 (MQ=60)
AGGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTC > SRR4302536.2444595/1‑94 (MQ=60)
GGTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCA < SRR4302536.1244876/94‑1 (MQ=60)
GTTTCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCAT < SRR4302536.4983812/94‑1 (MQ=60)
TCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTT > SRR4302536.2843178/1‑94 (MQ=60)
TCCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTT < SRR4302536.6297447/94‑1 (MQ=60)
CCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTT < SRR4302536.4167105/94‑1 (MQ=60)
CCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTT < SRR4302536.4167104/94‑1 (MQ=60)
CCGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTT < SRR4302536.2712493/94‑1 (MQ=60)
CGGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTA < SRR4302536.2106077/94‑1 (MQ=60)
GGACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTTCAGGCTAACTTTGTCATCTTTAA > SRR4302536.5209541/1‑94 (MQ=60)
GACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAAT < SRR4302536.5929443/94‑1 (MQ=60)
ACTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATC > SRR4302536.2276038/1‑94 (MQ=60)
CTAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCT > SRR4302536.813519/1‑94 (MQ=60)
TAGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCTT > SRR4302536.5047143/1‑94 (MQ=60)
|
ACCGCCGCTGTGGTTACGGCTATTCAACATGCCAGAGAGAGGAACAAGGTTTTCCCCAGCCTGACCAATAGCCGCCACACAGGTTTCCGGACTGGTCAATCGACAAATTTCTTCCGTCGTTGCGCGCGTCCCTTTTCCCCATAAGAAATCGGCTTTTTCCAGGCTAACTTTGTCATCTTTAATCTT > NC_000913/1751300‑1751485
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
