Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,759,194 |
C→T |
A208T (GCA→ACA) |
ynhC ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,759,194 | 0 | C | T | 99.3%
| 473.6
/ ‑5.1
| 135 | A208T (GCA→ACA) | ynhC | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base T (58/76); total (58/77) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.50e-01 |
Only 100 of 142 total aligned reads displayed.
CTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCG > NC_000913/1759105‑1759283
|
cTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGAc > 2:2765649/1‑93 (MQ=255)
cagccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGt < 2:756637/93‑1 (MQ=255)
cagccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGt < 2:321882/93‑1 (MQ=255)
agccagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGtt < 1:972866/93‑1 (MQ=255)
cagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGTCATTCGCTGTGACGTTGAt < 1:3673225/93‑1 (MQ=255)
cagcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGAt > 1:1102920/1‑93 (MQ=255)
agcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATa > 2:748018/1‑93 (MQ=255)
agcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATa > 2:3480246/1‑93 (MQ=255)
gcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAg < 1:735093/93‑1 (MQ=255)
gcAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAg < 2:4608771/93‑1 (MQ=255)
caacaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGt < 1:1673168/93‑1 (MQ=255)
aacaaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTg < 1:1188877/93‑1 (MQ=255)
caaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGaa > 2:896201/1‑93 (MQ=255)
caaATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGaa < 2:4372293/93‑1 (MQ=255)
actCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAAcc < 1:2647243/91‑1 (MQ=255)
tCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGt < 1:2540556/93‑1 (MQ=255)
ttATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGcc < 1:541680/93‑1 (MQ=255)
ttATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGcc < 1:3447622/93‑1 (MQ=255)
tATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGccc < 2:247338/93‑1 (MQ=255)
tATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGccc < 1:4477554/93‑1 (MQ=255)
aTGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGcccc < 2:3432863/93‑1 (MQ=255)
tGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCg > 2:2614181/1‑93 (MQ=255)
gAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCgg < 1:1898447/93‑1 (MQ=255)
gCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTa < 2:57342/93‑1 (MQ=255)
aaaGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTG‑CCCGGTaaaa < 1:3034700/93‑1 (MQ=255)
aaGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTaaaa < 1:3303773/93‑1 (MQ=255)
aaGGGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTaaaa < 1:1074001/93‑1 (MQ=255)
aGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAAt < 2:4478755/93‑1 (MQ=255)
gtggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGATCCGTGCCCCGGTAAAATg > 1:591929/1‑93 (MQ=255)
tggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGa < 2:1710488/93‑1 (MQ=255)
tggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGa < 1:2588878/93‑1 (MQ=255)
ggtgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGAc < 2:463295/93‑1 (MQ=255)
tgACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTACAATGACGa > 2:3256305/1‑93 (MQ=255)
gACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAg < 1:3694587/93‑1 (MQ=255)
gCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGcatcat > 1:3210957/1‑93 (MQ=255)
gCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGcatcat > 2:3493676/1‑93 (MQ=255)
gggTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTc < 2:2153977/93‑1 (MQ=255)
tctttCATACGCCAGCTTGATTTGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTATAATGACGAGCATCATTCAg > 2:4196213/3‑93 (MQ=255)
gTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAg > 1:4560178/1‑93 (MQ=255)
ttttCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAgg > 1:861803/1‑93 (MQ=255)
tttCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGc < 1:2556836/93‑1 (MQ=255)
tCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTg > 2:2335384/1‑93 (MQ=255)
cAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGa < 2:4132682/93‑1 (MQ=255)
aaaCGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGAc < 1:1426411/93‑1 (MQ=255)
gCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACaaaa > 2:2781965/1‑93 (MQ=255)
ccAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAAt < 2:1920394/93‑1 (MQ=255)
cAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATg > 1:1228233/1‑93 (MQ=255)
cAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATg > 1:675595/1‑93 (MQ=255)
aGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGt < 2:1954120/93‑1 (MQ=255)
aGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGt > 1:2511595/1‑93 (MQ=255)
gCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGtt < 1:1011149/93‑1 (MQ=255)
gCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGtt < 2:995665/93‑1 (MQ=255)
gCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGtt > 1:389974/1‑93 (MQ=255)
cTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTc < 1:4393936/93‑1 (MQ=255)
cTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTG‑CCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCg < 1:2133386/93‑1 (MQ=255)
ttGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCg < 1:1520410/93‑1 (MQ=255)
ttGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCg > 2:4302210/1‑93 (MQ=255)
ttGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCg > 1:3762112/1‑93 (MQ=255)
ttGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCg < 1:1520411/93‑1 (MQ=255)
tGATATTGTGCAAGTGGGCATTCGCCGTGACGTTGATAGTGAACCGTGCCCCTGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGa < 1:1808321/93‑1 (MQ=255)
tGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGa < 1:2384503/93‑1 (MQ=255)
gATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGAt < 1:444222/93‑1 (MQ=255)
atatGCTGGAAGTGGTCATCCGCTGTAACGTTGATAGTGATCCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATc < 2:1677024/93‑1 (MQ=255)
atatGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATc > 1:487939/1‑93 (MQ=255)
tatGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCa > 2:1803871/1‑93 (MQ=255)
tatGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCa > 2:882632/1‑93 (MQ=255)
atGCTGCAAGTGGCCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAc > 1:2792579/1‑93 (MQ=255)
tgctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAcc > 1:3040876/1‑93 (MQ=255)
tgctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAcc < 2:2648238/93‑1 (MQ=255)
tgctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAcc < 1:2155531/93‑1 (MQ=255)
tgctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAcc < 2:1037450/93‑1 (MQ=255)
gctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCg < 1:4594269/93‑1 (MQ=255)
ctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATTTTCGATCACCGt < 1:3833780/93‑1 (MQ=255)
ctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGt < 2:4017404/93‑1 (MQ=255)
ctgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGt < 1:890531/93‑1 (MQ=255)
tgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGtt < 2:3539712/93‑1 (MQ=255)
tgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGtt < 2:4663627/93‑1 (MQ=255)
tgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGtt < 1:2787096/93‑1 (MQ=255)
tgcAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGtt < 2:924877/93‑1 (MQ=255)
gTGGGCATTCGCTGTGACGTTGATAGTGAACCGTTCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTc < 1:581360/93‑1 (MQ=255)
gTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTc > 2:2858731/1‑93 (MQ=255)
tGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCg > 2:747991/1‑93 (MQ=255)
gggCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCgg > 1:4347722/1‑93 (MQ=255)
ggCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGc < 2:3909813/93‑1 (MQ=255)
ggCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGc > 2:1332334/1‑93 (MQ=255)
cATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCAc < 1:2003291/93‑1 (MQ=255)
aTTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCAcc > 1:3101790/1‑93 (MQ=255)
aTTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCAcc < 2:3634408/93‑1 (MQ=255)
ttCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTCCGATCACCGTTGCTTCGGCACCt < 2:4102481/93‑1 (MQ=255)
tCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCtt < 2:3578492/93‑1 (MQ=255)
cGCTGTTACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTc < 1:407813/93‑1 (MQ=255)
cGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTc < 1:546353/93‑1 (MQ=255)
cGCTGTGACGTTGATAATGAACCGTGACCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTc < 1:3526068/93‑1 (MQ=255)
gCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTTGATCACCGTTGCTTCGGCACCTTcc > 1:244499/1‑93 (MQ=255)
gCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTcc < 1:1708601/93‑1 (MQ=255)
gCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTcc < 2:3683477/93‑1 (MQ=255)
gCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTcc > 2:3358379/1‑93 (MQ=255)
gCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTcc < 2:2110914/93‑1 (MQ=255)
gCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTcc < 1:60947/93‑1 (MQ=255)
cTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCg > 2:699907/1‑93 (MQ=255)
|
CTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCG > NC_000913/1759105‑1759283
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCA > NC_000913/1759101‑1759286
|
CATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGT > SRR4302544.1011014/1‑94 (MQ=60)
CATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGT < SRR4302544.2945877/94‑1 (MQ=60)
TCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGA < SRR4302544.3283753/94‑1 (MQ=60)
AGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTG < SRR4302544.982408/94‑1 (MQ=60)
CCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGAT > SRR4302544.1113907/1‑94 (MQ=60)
CAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGTCATTCGCTGTGACGTTGATA < SRR4302544.3709863/94‑1 (MQ=60)
GCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGT < SRR4302544.742281/94‑1 (MQ=60)
CAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTG < SRR4302544.4685737/94‑1 (MQ=60)
CAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTG < SRR4302544.1689653/94‑1 (MQ=60)
AACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGA < SRR4302544.1200679/94‑1 (MQ=60)
CAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAAC < SRR4302544.1263683/94‑1 (MQ=60)
AAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACC < SRR4302544.4016267/94‑1 (MQ=60)
AAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACC < SRR4302544.1734513/94‑1 (MQ=60)
ACTCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCG < SRR4302544.2672633/94‑1 (MQ=60)
TCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTG < SRR4302544.2564950/94‑1 (MQ=60)
GTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCC > SRR4302544.357839/1‑94 (MQ=60)
TTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCC < SRR4302544.3480553/94‑1 (MQ=60)
TTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCC < SRR4302544.547012/94‑1 (MQ=60)
TATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCC < SRR4302544.4522572/94‑1 (MQ=60)
TGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCACGTGGGCATTCGCTGTGACGTTGATCGGGAACCGGGCCCCGG > SRR4302544.3387652/1‑94 (MQ=60)
GAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGT < SRR4302544.1916792/94‑1 (MQ=60)
AAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTG‑CCCGGTAAAAT < SRR4302544.3063764/94‑1 (MQ=60)
AAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAAT < SRR4302544.3335242/94‑1 (MQ=60)
AAGGGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAAT < SRR4302544.1084676/94‑1 (MQ=60)
AGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGATCCGTGCCCCGGTAAAATG > SRR4302544.597739/1‑94 (MQ=60)
AGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATG > SRR4302544.2491509/1‑94 (MQ=60)
TGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGAC < SRR4302544.2613785/94‑1 (MQ=60)
TGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGAC > SRR4302544.2004220/1‑94 (MQ=60)
GACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGC < SRR4302544.3731392/94‑1 (MQ=60)
GACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGC > SRR4302544.4524653/1‑94 (MQ=60)
ACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATACGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCA > SRR4302544.2582826/1‑94 (MQ=60)
AGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCAT > SRR4302544.3241580/1‑94 (MQ=60)
CGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTC > SRR4302544.552301/1‑94 (MQ=60)
CGGGTGTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCCTGCCCCGGTAAAATGACGAGCATCATTC < SRR4302544.602192/94‑1 (MQ=60)
GGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAG > SRR4302544.3171919/1‑94 (MQ=60)
GGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAG > SRR4302544.4605657/1‑94 (MQ=60)
GTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGG > SRR4302544.870331/1‑94 (MQ=60)
TTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCT < SRR4302544.2581386/94‑1 (MQ=60)
TTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCT > SRR4302544.978908/1‑94 (MQ=60)
AAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACA < SRR4302544.1440601/94‑1 (MQ=60)
CCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATG > SRR4302544.1240387/1‑94 (MQ=60)
CCAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATG > SRR4302544.682287/1‑94 (MQ=60)
CAGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGT > SRR4302544.2535699/1‑94 (MQ=60)
AGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTT > SRR4302544.2880028/1‑94 (MQ=60)
AGCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTT > SRR4302544.393934/1‑94 (MQ=60)
GCTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTC < SRR4302544.1021223/94‑1 (MQ=60)
CTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCG > SRR4302544.701141/1‑94 (MQ=60)
CTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCG > SRR4302544.3799447/1‑94 (MQ=60)
CTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCG < SRR4302544.4438372/94‑1 (MQ=60)
CTTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTG‑CCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGA < SRR4302544.2153800/94‑1 (MQ=60)
TTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGA < SRR4302544.1535499/94‑1 (MQ=60)
TTGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGA < SRR4302544.1535500/94‑1 (MQ=60)
TGATATTGTGCAAGTGGGCATTCGCCGTGACGTTGATAGTGAACCGTGCCCCTGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGAT < SRR4302544.1825996/94‑1 (MQ=60)
TGATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGAT < SRR4302544.2407085/94‑1 (MQ=60)
GATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATC < SRR4302544.448661/94‑1 (MQ=60)
GATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATC > SRR4302544.492719/1‑94 (MQ=60)
ATATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCA < SRR4302544.1651763/94‑1 (MQ=60)
TATGCTGCAAGTGGCCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCAC > SRR4302544.2819468/1‑94 (MQ=60)
ATGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACC > SRR4302544.3069975/1‑94 (MQ=60)
TGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCG > SRR4302544.4450092/1‑94 (MQ=60)
TGCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCG < SRR4302544.2176023/94‑1 (MQ=60)
GCTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGT < SRR4302544.4639969/94‑1 (MQ=60)
CTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATTTTCGATCACCGTT < SRR4302544.3871788/94‑1 (MQ=60)
CTGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTT < SRR4302544.899355/94‑1 (MQ=60)
TGCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTG < SRR4302544.2813921/94‑1 (MQ=60)
GCAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGC > SRR4302544.1159152/1‑94 (MQ=60)
CAAGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCT > SRR4302544.2708920/1‑94 (MQ=60)
AGTGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTC > SRR4302544.2296192/1‑94 (MQ=60)
GTGGGCATTCGCTGTGACGTTGATAGTGAACCGTTCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCG < SRR4302544.587057/94‑1 (MQ=60)
TGGGCATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGG > SRR4302544.4391913/1‑94 (MQ=60)
CATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACC < SRR4302544.2022751/94‑1 (MQ=60)
CATTCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACC > SRR4302544.3131315/1‑94 (MQ=60)
TCGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTC < SRR4302544.384657/94‑1 (MQ=60)
CGCTGTTACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCC < SRR4302544.411960/94‑1 (MQ=60)
CGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTTGATCACCGTTGCTTCGGCACCTTCC > SRR4302544.247048/1‑94 (MQ=60)
CGCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCC < SRR4302544.551716/94‑1 (MQ=60)
CGCTGTGACGTTGATAATGAACCGTGACCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCC < SRR4302544.3559761/94‑1 (MQ=60)
GCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCG < SRR4302544.61566/94‑1 (MQ=60)
GCTGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCG < SRR4302544.1725433/94‑1 (MQ=60)
TGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCC < SRR4302544.3300880/94‑1 (MQ=60)
TGTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCC < SRR4302544.1615166/94‑1 (MQ=60)
GTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCA < SRR4302544.3366559/94‑1 (MQ=60)
GTGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCA < SRR4302544.1004245/94‑1 (MQ=60)
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CATCCTCAGCCAGCAACAAATCGTTATGAGCAAAGTGGTGACTGAGCGGGTTTTCAAACGCCAGCTTGATATGCTGCAAGTGGGCATTCGCTGCGACGTTGATAGTGAACCGTGCCCCGGTAAAATGACGAGCATCATTCAGGCTGACAAAATGTTCGATCACCGTTGCTTCGGCACCTTCCGCCA > NC_000913/1759101‑1759286
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
