Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,854,076 |
T→C |
S293G (AGC→GGC) |
b1772 ← |
putative kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,854,076 | 0 | T | C | 96.0%
| 447.3
/ 6.4
| 150 | S293G (AGC→GGC) | b1772 | putative kinase |
| Reads supporting (aligned to +/- strand): ref base T (2/4); new base C (75/69); total (77/73) |
| Fisher's exact test for biased strand distribution p-value = 4.33e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.87e-01 |
Only 100 of 156 total aligned reads displayed.
TCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGC > NC_000913/1853986‑1854166
|
tCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTa > 1:1197039/1‑93 (MQ=255)
tCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTa < 2:557384/93‑1 (MQ=255)
cTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAg < 1:2685514/93‑1 (MQ=255)
cTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAg < 2:1642312/93‑1 (MQ=255)
tttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGa > 2:3187753/1‑93 (MQ=255)
tttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGa > 2:4331066/1‑93 (MQ=255)
tttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGa > 1:3322795/1‑93 (MQ=255)
ttttATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAAc < 1:1436320/93‑1 (MQ=255)
tttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAAc < 1:2996907/93‑1 (MQ=255)
ttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAAcc < 1:3567828/93‑1 (MQ=255)
aTTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgag > 1:2448222/1‑93 (MQ=255)
aTTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgag > 2:3934747/1‑93 (MQ=255)
tttGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgaga < 2:3716468/93‑1 (MQ=255)
ttGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGAt < 2:2021803/93‑1 (MQ=255)
gCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAg > 2:3548476/1‑93 (MQ=255)
ccTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgc < 1:2919509/93‑1 (MQ=255)
cTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgcc < 1:1704604/93‑1 (MQ=255)
cTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgcc > 2:894920/1‑93 (MQ=255)
cTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgcc < 1:2911023/93‑1 (MQ=255)
tCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgccgc < 2:2018580/93‑1 (MQ=255)
ttATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGt > 2:2881617/1‑93 (MQ=255)
ttATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGt > 1:925988/1‑93 (MQ=255)
ttATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGt > 1:1672632/1‑93 (MQ=255)
ttATCCTTCGTATTCTTCCAGCAATAGTTCGACCAGCGTTCTGTTTTTTACTCCGGGGGCGGCACCGACGCCTAGAACCGAGATAGccgccgg > 2:4214073/1‑92 (MQ=255)
aTCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTg < 1:3501311/93‑1 (MQ=255)
aTCCTTCGTATTCTTCCAGCAATTGCTAGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGACATAGCCCGCGTTg > 2:3574895/1‑93 (MQ=255)
ccTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCa > 2:3904836/1‑93 (MQ=255)
cTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAt > 1:1054663/1‑93 (MQ=255)
ttCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAtt < 1:1871338/93‑1 (MQ=255)
tCGTATTCTTCCAGCAATTGTTCGCCCAGCTTTCTGTTTTTTGCGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTg < 1:1822787/93‑1 (MQ=255)
tCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTg < 1:4016878/93‑1 (MQ=255)
cGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTgg < 2:2449705/93‑1 (MQ=255)
ttcttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCaaa < 2:927576/93‑1 (MQ=255)
ttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCg > 2:3691867/1‑93 (MQ=255)
tcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGt < 1:1726577/93‑1 (MQ=255)
ccAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTg > 2:318669/1‑93 (MQ=255)
ccAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTg < 1:1787545/93‑1 (MQ=255)
cAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgc < 1:4003444/93‑1 (MQ=255)
cAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgc > 2:3508979/1‑93 (MQ=255)
gCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgcgc < 2:2091462/93‑1 (MQ=255)
cAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCa < 2:2706214/93‑1 (MQ=255)
cAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCa < 2:562716/93‑1 (MQ=255)
aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt > 1:4573437/1‑93 (MQ=255)
aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt < 2:1763499/93‑1 (MQ=255)
aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt > 2:4059817/1‑93 (MQ=255)
aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt > 1:4329370/1‑93 (MQ=255)
aTTGTTCGCCCGGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGACCCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAtt < 2:121107/93‑1 (MQ=255)
aTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAtt > 1:4145057/1‑93 (MQ=255)
gtGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAGTGGCAAAGCGTGCGCATTc > 2:4222182/2‑93 (MQ=255)
tGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCa < 1:4451284/93‑1 (MQ=255)
gTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCAc < 1:2217351/93‑1 (MQ=255)
tCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGc < 2:1344931/93‑1 (MQ=255)
cGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCa > 2:4196109/1‑93 (MQ=255)
gACCCGGTTTCTGAGTTTTACGCCTGTGGTGGCAGCGACGCCCAGAACCGAGATCGCAGCAGTTGCATTGGCAAAGCGTGCGCATTCACGCAg > 2:2840606/1‑93 (MQ=255)
gACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAg > 1:1958282/1‑93 (MQ=255)
gACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAg > 1:688567/1‑93 (MQ=255)
aCCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGa > 1:3916457/1‑93 (MQ=255)
aCCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGa > 1:491970/1‑93 (MQ=255)
cAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtt < 2:3529188/93‑1 (MQ=255)
cAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtt < 2:3033242/93‑1 (MQ=255)
cAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtt > 1:1013072/1‑93 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt > 2:2408007/1‑93 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt > 1:3700050/1‑93 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt > 1:4241953/1‑93 (MQ=255)
cTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttttt < 1:3926559/93‑1 (MQ=255)
cTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttttt > 1:902586/1‑93 (MQ=255)
cTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttttt > 1:1742318/1‑93 (MQ=255)
tttCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTg > 2:283076/1‑93 (MQ=255)
ttCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGc > 1:433826/1‑93 (MQ=255)
tCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGcc < 2:1676777/93‑1 (MQ=255)
tCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGcc < 2:428261/93‑1 (MQ=255)
tGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCtt < 1:3691631/93‑1 (MQ=255)
tGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCtt < 2:290465/93‑1 (MQ=255)
tttttGCGCCAGTGGTGGCGCCGCCGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTa < 2:8527/93‑1 (MQ=255)
tttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTa < 1:3921409/93‑1 (MQ=255)
ttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTaa < 1:3385434/93‑1 (MQ=255)
ttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTaa < 2:15280/93‑1 (MQ=255)
tttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGTCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAAc < 1:2757108/93‑1 (MQ=255)
tttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAAc > 2:3505516/1‑93 (MQ=255)
ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa > 2:1865008/1‑93 (MQ=255)
ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa < 1:1240047/93‑1 (MQ=255)
ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa < 1:1898058/93‑1 (MQ=255)
cGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTg > 2:1044638/1‑93 (MQ=255)
cGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTg > 1:218961/1‑93 (MQ=255)
gCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGc > 1:1355884/1‑93 (MQ=255)
ccGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGcc > 2:2110422/1‑93 (MQ=255)
gtggtgGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCa > 1:615850/1‑93 (MQ=255)
tggtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCaa < 1:3099756/93‑1 (MQ=255)
gtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATa > 2:3722793/1‑93 (MQ=255)
ggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATaaa > 2:1458021/1‑93 (MQ=255)
gCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATaaaa < 2:3800266/93‑1 (MQ=255)
ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTCACAGTGCCGCAATAAAACCt > 1:597695/1‑93 (MQ=255)
ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt < 2:1749126/93‑1 (MQ=255)
ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt < 2:802271/93‑1 (MQ=255)
ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt > 1:4426813/1‑93 (MQ=255)
cGACGCCTAGAACCGAGATAGCCGCCGCTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTg > 2:4447146/1‑93 (MQ=255)
gACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGa > 1:3427006/1‑93 (MQ=255)
gACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGa > 2:2451924/1‑93 (MQ=255)
aCGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGaa < 2:2103307/93‑1 (MQ=255)
gCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGc > 2:681160/1‑93 (MQ=255)
|
TCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGC > NC_000913/1853986‑1854166
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAAA > NC_000913/1853983‑1854169
|
GTATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCC > SRR4302544.3221798/1‑94 (MQ=60)
TATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCT < SRR4302544.3199758/94‑1 (MQ=60)
ATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTA > SRR4302544.1208907/1‑94 (MQ=60)
CTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGA < SRR4302544.2711251/94‑1 (MQ=60)
CTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGA > SRR4302544.3354448/1‑94 (MQ=60)
TTTTATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACC < SRR4302544.1450617/94‑1 (MQ=60)
TTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACC < SRR4302544.3025646/94‑1 (MQ=60)
TTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCG < SRR4302544.3602038/94‑1 (MQ=60)
CATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAG > SRR4302544.2471575/1‑94 (MQ=60)
TTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATA < SRR4302544.3644685/94‑1 (MQ=60)
CCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCC < SRR4302544.2947581/94‑1 (MQ=60)
CTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCG < SRR4302544.2939033/94‑1 (MQ=60)
CTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCG < SRR4302544.1721418/94‑1 (MQ=60)
TCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCC < SRR4302544.1890112/94‑1 (MQ=60)
ATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGT > SRR4302544.1689115/1‑94 (MQ=60)
ATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGT > SRR4302544.935112/1‑94 (MQ=60)
ATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGC < SRR4302544.3534713/94‑1 (MQ=60)
TCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCA > SRR4302544.621053/1‑94 (MQ=60)
CCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAT > SRR4302544.2995302/1‑94 (MQ=60)
CCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAT > SRR4302544.1065120/1‑94 (MQ=60)
CCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAT > SRR4302544.1724661/1‑94 (MQ=60)
CTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATT < SRR4302544.1818552/94‑1 (MQ=60)
TTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTG < SRR4302544.1889426/94‑1 (MQ=60)
TCGTATTCTTCCAGCAATTGTTCGCCCAGCTTTCTGTTTTTTGCGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGG < SRR4302544.1840553/94‑1 (MQ=60)
TCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGG < SRR4302544.4056833/94‑1 (MQ=60)
CGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGC > SRR4302544.3742802/1‑94 (MQ=60)
ATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAA > SRR4302544.4589296/1‑94 (MQ=60)
ATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAA > SRR4302544.1501493/1‑94 (MQ=60)
TCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTG < SRR4302544.1743513/94‑1 (MQ=60)
CCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGC < SRR4302544.1805018/94‑1 (MQ=60)
CAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCG < SRR4302544.4043284/94‑1 (MQ=60)
CAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCG < SRR4302544.4043283/94‑1 (MQ=60)
CAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAT > SRR4302544.4619013/1‑94 (MQ=60)
CAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAT > SRR4302544.4619014/1‑94 (MQ=60)
CAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAT > SRR4302544.4373458/1‑94 (MQ=60)
AATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATT > SRR4302544.4186091/1‑94 (MQ=60)
ATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTC > SRR4302544.1978385/1‑94 (MQ=60)
TGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCAC < SRR4302544.4496123/94‑1 (MQ=60)
GTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACG > SRR4302544.2473023/1‑94 (MQ=60)
GTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACG < SRR4302544.2238206/94‑1 (MQ=60)
CGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAG > SRR4302544.1977279/1‑94 (MQ=60)
CGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAG < SRR4302544.698979/94‑1 (MQ=60)
CGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAG > SRR4302544.695423/1‑94 (MQ=60)
GACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGA > SRR4302544.3955356/1‑94 (MQ=60)
GACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGA > SRR4302544.496802/1‑94 (MQ=60)
GCCAGCTTTCTGTTTTTTACGCGGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAT < SRR4302544.24714/94‑1 (MQ=60)
ACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAT < SRR4302544.3209458/94‑1 (MQ=60)
CCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATT > SRR4302544.1023168/1‑94 (MQ=60)
CAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTT > SRR4302544.4285194/1‑94 (MQ=60)
CAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTT > SRR4302544.3736886/1‑94 (MQ=60)
CAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTT > SRR4302544.1324232/1‑94 (MQ=60)
CAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTT > SRR4302544.3464034/1‑94 (MQ=60)
GCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTT < SRR4302544.1749839/94‑1 (MQ=60)
GCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTT > SRR4302544.911517/1‑94 (MQ=60)
GCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTT > SRR4302544.1759378/1‑94 (MQ=60)
CTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTG < SRR4302544.3965559/94‑1 (MQ=60)
TTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGC > SRR4302544.438203/1‑94 (MQ=60)
TTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCC < SRR4302544.2787738/94‑1 (MQ=60)
TGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTC < SRR4302544.3728415/94‑1 (MQ=60)
GTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCT > SRR4302544.4460066/1‑94 (MQ=60)
TTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTA < SRR4302544.111492/94‑1 (MQ=60)
TTTTTACGCCGGTGGTTGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAA < SRR4302544.3960360/94‑1 (MQ=60)
TTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAA < SRR4302544.3960359/94‑1 (MQ=60)
TTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAAC < SRR4302544.3417785/94‑1 (MQ=60)
TTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGTCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACA < SRR4302544.2783644/94‑1 (MQ=60)
TTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAG < SRR4302544.1916401/94‑1 (MQ=60)
TTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAG < SRR4302544.1252294/94‑1 (MQ=60)
ACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTG > SRR4302544.221225/1‑94 (MQ=60)
CGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGC > SRR4302544.4356433/1‑94 (MQ=60)
CGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGC > SRR4302544.1369333/1‑94 (MQ=60)
GGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCA > SRR4302544.621893/1‑94 (MQ=60)
TGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAAT < SRR4302544.3129268/94‑1 (MQ=60)
GCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAAC < SRR4302544.988319/94‑1 (MQ=60)
ACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTCACAGTGCCGCAATAAAACCT > SRR4302544.603551/1‑94 (MQ=60)
ACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCT > SRR4302544.4471477/1‑94 (MQ=60)
CGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGA > SRR4302544.415917/1‑94 (MQ=60)
CGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGA > SRR4302544.3459769/1‑94 (MQ=60)
GACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAA > SRR4302544.3393653/1‑94 (MQ=60)
CGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGC > SRR4302544.1463358/1‑94 (MQ=60)
CCTAGAACCGAAATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAA < SRR4302544.826137/94‑1 (MQ=60)
CTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAAA > SRR4302544.4239484/1‑94 (MQ=60)
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GTATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAAA > NC_000913/1853983‑1854169
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
