Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,854,076 |
T→C |
S293G (AGC→GGC) |
b1772 ← |
putative kinase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,854,076 | 0 | T | C | 100.0%
| 630.9
/ NA
| 191 | S293G (AGC→GGC) | b1772 | putative kinase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (87/104); total (87/104) |
Only 100 of 200 total aligned reads displayed.
TCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAG > NC_000913/1853986‑1854165
|
tCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTa > 2:1003362/1‑93 (MQ=255)
cTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAg > 1:1943621/1‑93 (MQ=255)
cTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAg < 2:5429776/93‑1 (MQ=255)
tttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGa > 1:1849492/1‑93 (MQ=255)
ttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGaa > 2:5111379/1‑93 (MQ=255)
ttttCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGaa < 2:17330/93‑1 (MQ=255)
tttCATTTGCCTTTATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAAc < 1:6117335/93‑1 (MQ=255)
cATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCga > 2:4216510/1‑93 (MQ=255)
cATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCga > 2:2738132/1‑93 (MQ=255)
cATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCga < 2:2594747/93‑1 (MQ=255)
cATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCga < 2:2317870/93‑1 (MQ=255)
aTTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgag > 2:2489073/1‑93 (MQ=255)
aTTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCgag > 1:5896034/1‑93 (MQ=255)
tGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATa < 1:6064144/93‑1 (MQ=255)
ccTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgc < 1:3433143/93‑1 (MQ=255)
ccTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgc < 1:4830533/93‑1 (MQ=255)
ccTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgc < 2:2372502/93‑1 (MQ=255)
cTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgcc < 2:5017509/93‑1 (MQ=255)
ttCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgccg > 2:5753311/1‑93 (MQ=255)
ttCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAgccg < 1:6305495/93‑1 (MQ=255)
aTTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATCGccgccg > 2:4622664/1‑93 (MQ=255)
ttATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGt < 1:3225028/93‑1 (MQ=255)
tATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGtt > 1:5241608/1‑93 (MQ=255)
aTCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTg < 2:3089116/93‑1 (MQ=255)
aTCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTg > 1:6491628/1‑93 (MQ=255)
tCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGc > 1:5209319/1‑93 (MQ=255)
tCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGc > 2:3358697/1‑93 (MQ=255)
cTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAt > 1:4687191/1‑93 (MQ=255)
ttCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGGCGCCGTTGCAtt > 2:1039150/1‑93 (MQ=255)
ttCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAtt < 2:1804851/93‑1 (MQ=255)
ttCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAtt < 1:2007492/93‑1 (MQ=255)
ttCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAtt > 1:5990258/1‑93 (MQ=255)
gTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGc > 2:3035603/1‑93 (MQ=255)
gTATTCTGCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGc < 1:4282582/93‑1 (MQ=255)
ttcttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCaaa > 2:492115/1‑93 (MQ=255)
tcttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAg > 2:2119549/1‑93 (MQ=255)
tcttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAg < 2:670429/93‑1 (MQ=255)
cttcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGc < 1:4122542/93‑1 (MQ=255)
tcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGt < 1:4860598/93‑1 (MQ=255)
tcCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGt > 1:1286094/1‑93 (MQ=255)
ccAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTg < 1:3790640/93‑1 (MQ=255)
cAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGTCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgc > 1:3156786/1‑93 (MQ=255)
cAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTgc < 2:5592455/93‑1 (MQ=255)
cAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGTCAAAGCGTGCGCa > 2:6734477/1‑93 (MQ=255)
aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt < 2:2328910/93‑1 (MQ=255)
aaTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAt < 2:5052195/93‑1 (MQ=255)
aTTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCAtt > 2:3322448/1‑93 (MQ=255)
tGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCa > 1:4459346/1‑93 (MQ=255)
tCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGc < 1:1702632/93‑1 (MQ=255)
cGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCa < 2:6042202/93‑1 (MQ=255)
gACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAg > 2:3125078/1‑93 (MQ=255)
aCCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGa > 2:4786555/1‑93 (MQ=255)
aCCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGa < 1:4061796/93‑1 (MQ=255)
ccAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAt > 1:778970/1‑93 (MQ=255)
cAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtt < 2:3350827/93‑1 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCTAAGCGTGCGCATTCACGCAGAttt > 1:2051571/1‑93 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt > 2:3740537/1‑93 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt > 2:5933437/1‑93 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt < 1:2769281/93‑1 (MQ=255)
aGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAttt < 2:4358041/93‑1 (MQ=255)
gCTTTCTGTTTTATACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAtttt < 1:1516795/93‑1 (MQ=255)
tttCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTg > 1:1867889/1‑93 (MQ=255)
ttCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGc < 2:3507316/93‑1 (MQ=255)
ttCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGc > 1:4156174/1‑93 (MQ=255)
tCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGcc < 1:1024762/93‑1 (MQ=255)
cTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCt < 2:2058961/93‑1 (MQ=255)
cTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCt < 2:4459666/93‑1 (MQ=255)
cTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCt < 1:5636107/93‑1 (MQ=255)
tGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCtt < 2:2007583/93‑1 (MQ=255)
tGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCtt < 1:5384255/93‑1 (MQ=255)
ttttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCt < 1:5104021/93‑1 (MQ=255)
tttttACGCCGGGTGTTGCCCCGACGCCTAGAACCGAAATAGCCGCCGGTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTa < 2:380982/93‑1 (MQ=255)
ttttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTaa < 2:1527793/93‑1 (MQ=255)
ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa < 2:4262123/93‑1 (MQ=255)
ttACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACa > 2:1218580/1‑93 (MQ=255)
tccGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAg < 1:2172078/91‑1 (MQ=255)
aCGCCGGTGTTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGt < 1:2967117/93‑1 (MQ=255)
aCGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGt > 2:1327458/1‑93 (MQ=255)
aCGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGt > 1:6367952/1‑93 (MQ=255)
cGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTg > 2:6534478/1‑93 (MQ=255)
cGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGACGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAATg > 2:4855808/1‑93 (MQ=255)
gCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGc < 1:3631783/93‑1 (MQ=255)
cGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAGGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCg < 1:2426142/93‑1 (MQ=255)
cGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCg < 2:2666872/93‑1 (MQ=255)
gtggtgGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCa > 1:1166090/1‑93 (MQ=255)
tggtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCaa > 1:349238/1‑93 (MQ=255)
ggtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAAt < 1:1067838/93‑1 (MQ=255)
gtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATa > 2:4989972/1‑93 (MQ=255)
gtggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATa < 2:1821599/93‑1 (MQ=255)
tggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATaa < 2:5633962/93‑1 (MQ=255)
ggCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATaaa > 1:3746739/1‑93 (MQ=255)
gCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATaaaa > 2:169071/1‑93 (MQ=255)
ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt < 2:1284405/93‑1 (MQ=255)
ccGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCt > 2:6631746/1‑93 (MQ=255)
cGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTg < 2:1376942/93‑1 (MQ=255)
gACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGa < 2:21658/93‑1 (MQ=255)
gACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGa > 1:5730878/1‑93 (MQ=255)
gACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGa < 1:4465738/93‑1 (MQ=255)
aCGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGaa < 1:2582362/93‑1 (MQ=255)
cGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAg > 1:2312384/1‑93 (MQ=255)
|
TCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAG > NC_000913/1853986‑1854165
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GTATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAAA > NC_000913/1853983‑1854169
|
GTATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCC > SRR4302536.6414313/1‑94 (MQ=60)
TATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCT > SRR4302536.4336910/1‑94 (MQ=60)
TATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCT > SRR4302536.5565186/1‑94 (MQ=60)
TATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCT > SRR4302536.2286609/1‑94 (MQ=60)
TCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAG > SRR4302536.2002062/1‑94 (MQ=60)
CTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGA > SRR4302536.1905230/1‑94 (MQ=60)
TTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAA < SRR4302536.1921003/94‑1 (MQ=60)
TTTCATTTGCCTTTATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACC < SRR4302536.6299669/94‑1 (MQ=60)
TTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCG > SRR4302536.2962763/1‑94 (MQ=60)
CATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAG > SRR4302536.6071604/1‑94 (MQ=60)
TTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATA > SRR4302536.5435227/1‑94 (MQ=60)
TGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAG < SRR4302536.2366794/94‑1 (MQ=60)
TGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAG < SRR4302536.6245052/94‑1 (MQ=60)
CCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCC < SRR4302536.4975889/94‑1 (MQ=60)
CCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCC < SRR4302536.3535344/94‑1 (MQ=60)
CCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCC < SRR4302536.3686428/94‑1 (MQ=60)
CCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCC > SRR4302536.1091885/1‑94 (MQ=60)
TTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGC < SRR4302536.6493303/94‑1 (MQ=60)
TTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGC < SRR4302536.5304099/94‑1 (MQ=60)
TTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGC > SRR4302536.2155964/1‑94 (MQ=60)
ATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGT > SRR4302536.113595/1‑94 (MQ=60)
TTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTT < SRR4302536.3319576/94‑1 (MQ=60)
TTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTT > SRR4302536.5397779/1‑94 (MQ=60)
TATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTG > SRR4302536.6685187/1‑94 (MQ=60)
ATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGC > SRR4302536.5364586/1‑94 (MQ=60)
CCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCAT > SRR4302536.4828137/1‑94 (MQ=60)
CTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATT > SRR4302536.6168850/1‑94 (MQ=60)
TTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTG < SRR4302536.6515977/94‑1 (MQ=60)
TTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTG > SRR4302536.4602577/1‑94 (MQ=60)
TTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTG < SRR4302536.647965/94‑1 (MQ=60)
TTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTG < SRR4302536.5639762/94‑1 (MQ=60)
TTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTG < SRR4302536.2067905/94‑1 (MQ=60)
TCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACTCCTAGAACCGAGATAGCCGCCGTTGCATTGG < SRR4302536.4456663/94‑1 (MQ=60)
CGTATTCTTCCAGCCATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGatgcagtagc > SRR4302536.4401598/1‑84 (MQ=60)
GTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCA < SRR4302536.3784917/94‑1 (MQ=60)
GTATTCTGCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCA < SRR4302536.4410419/94‑1 (MQ=60)
ATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAA < SRR4302536.492276/94‑1 (MQ=60)
TTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAG < SRR4302536.3928172/94‑1 (MQ=60)
CTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCG < SRR4302536.4244771/94‑1 (MQ=60)
TTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGT > SRR4302536.1324574/1‑94 (MQ=60)
TCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTG < SRR4302536.5006872/94‑1 (MQ=60)
TCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTG > SRR4302536.4600410/1‑94 (MQ=60)
CCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGTCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGC > SRR4302536.3249245/1‑94 (MQ=60)
CCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGC < SRR4302536.3903727/94‑1 (MQ=60)
CAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCG < SRR4302536.2650297/94‑1 (MQ=60)
TTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCA < SRR4302536.246300/94‑1 (MQ=60)
TTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCA > SRR4302536.4593362/1‑94 (MQ=60)
TTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACTGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGC > SRR4302536.6381878/1‑94 (MQ=60)
TCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCA < SRR4302536.1751904/94‑1 (MQ=60)
CGACCAGCTTTCTGTTTTTTACGGCGGTGGTGGCAGCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGtcg > SRR4302536.6228044/1‑91 (MQ=60)
CGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAG < SRR4302536.6086982/94‑1 (MQ=60)
CGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAG > SRR4302536.3506822/1‑94 (MQ=60)
GACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGA < SRR4302536.2699012/94‑1 (MQ=60)
ACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAT < SRR4302536.4343637/94‑1 (MQ=60)
ACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAT > SRR4302536.801790/1‑94 (MQ=60)
ACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAT > SRR4302536.4190549/1‑94 (MQ=60)
ACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAT < SRR4302536.4182180/94‑1 (MQ=60)
ACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGAT > SRR4302536.3585362/1‑94 (MQ=60)
CAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCTAAGCGTGCGCATTCACGCAGATTT > SRR4302536.2113363/1‑94 (MQ=60)
CAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTT > SRR4302536.5108185/1‑94 (MQ=60)
AGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTT > SRR4302536.387960/1‑94 (MQ=60)
AGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTT < SRR4302536.2851608/94‑1 (MQ=60)
GCTTTCTGTTTTATACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTT < SRR4302536.1561451/94‑1 (MQ=60)
CTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTG > SRR4302536.1924113/1‑94 (MQ=60)
CTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTG < SRR4302536.2092915/94‑1 (MQ=60)
TTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGC > SRR4302536.4279542/1‑94 (MQ=60)
TCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCT < SRR4302536.1055105/94‑1 (MQ=60)
TCTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCT < SRR4302536.708221/94‑1 (MQ=60)
CTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTT < SRR4302536.1472979/94‑1 (MQ=60)
CTGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTT < SRR4302536.5803540/94‑1 (MQ=60)
TGTTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTC < SRR4302536.5544956/94‑1 (MQ=60)
TTTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTA < SRR4302536.5256606/94‑1 (MQ=60)
TTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAA < SRR4302536.1813525/94‑1 (MQ=60)
TTTTTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAA < SRR4302536.5834019/94‑1 (MQ=60)
TTACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAG < SRR4302536.4269519/94‑1 (MQ=60)
TCCGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGT < SRR4302536.2237485/94‑1 (MQ=60)
TACGCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGT > SRR4302536.6557717/1‑94 (MQ=60)
ACGCCGGTGTTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTG < SRR4302536.3054514/94‑1 (MQ=60)
GCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCC < SRR4302536.1293949/94‑1 (MQ=60)
GCCGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCC < SRR4302536.3740416/94‑1 (MQ=60)
CGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAGGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGC < SRR4302536.2499492/94‑1 (MQ=60)
CGGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGC > SRR4302536.1618688/1‑94 (MQ=60)
GGTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCA > SRR4302536.1201182/1‑94 (MQ=60)
GTGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAA > SRR4302536.358499/1‑94 (MQ=60)
TGGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAAT < SRR4302536.2041326/94‑1 (MQ=60)
GGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGTATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATA < SRR4302536.6568252/94‑1 (MQ=60)
GGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATA < SRR4302536.1099760/94‑1 (MQ=60)
GGTGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATA > SRR4302536.6020218/1‑94 (MQ=60)
TGGCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAA > SRR4302536.3858740/1‑94 (MQ=60)
GCACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAAC > SRR4302536.4995437/1‑94 (MQ=60)
CACCGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACC > SRR4302536.5373581/1‑94 (MQ=60)
CGACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGA > SRR4302536.5901338/1‑94 (MQ=60)
GACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAA < SRR4302536.4599899/94‑1 (MQ=60)
GACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAA > SRR4302536.1928280/1‑94 (MQ=60)
ACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAG > SRR4302536.2382564/1‑94 (MQ=60)
ACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAG < SRR4302536.2659964/94‑1 (MQ=60)
ACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAG < SRR4302536.3294802/94‑1 (MQ=60)
ACGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAG < SRR4302536.6263397/94‑1 (MQ=60)
CGCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGC > SRR4302536.6366892/1‑94 (MQ=60)
GCCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCA < SRR4302536.6901832/94‑1 (MQ=60)
CCTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAA < SRR4302536.5180817/94‑1 (MQ=60)
CTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAAA > SRR4302536.1541788/1‑94 (MQ=60)
CTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAAA > SRR4302536.3409822/1‑94 (MQ=60)
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GTATCTTTTTCATTTGCCTTCATTATCCTTCGTATTCTTCCAGCAATTGTTCGACCAGCTTTCTGTTTTTTACGCCGGTGGTGGCACCGACGCTTAGAACCGAGATAGCCGCCGTTGCATTGGCAAAGCGTGCGCATTCACGCAGATTTTTGCCTTCTAACAGTGCCGCAATAAAACCTGAAGCAAA > NC_000913/1853983‑1854169
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
