Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,892,514 |
T→C |
intergenic (+58/+62) |
b1810 → / ← b1811 |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,892,514 | 0 | T | C | 97.4%
| 463.6
/ ‑0.8
| 152 | intergenic (+58/+62) | b1810/b1811 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (4/0); new base C (80/68); total (84/68) |
| Fisher's exact test for biased strand distribution p-value = 1.28e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 |
Only 100 of 158 total aligned reads displayed.
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCA > NC_000913/1892424‑1892604
|
tatatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGccc > 1:1744875/1‑93 (MQ=255)
atatGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCt > 2:2282080/1‑93 (MQ=255)
atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt > 2:4191789/1‑93 (MQ=255)
atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt < 1:2898123/93‑1 (MQ=255)
atGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCttt < 2:4663850/93‑1 (MQ=255)
tGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCtttt > 1:2052584/1‑93 (MQ=255)
cAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtc > 2:2649374/1‑93 (MQ=255)
aGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtct > 1:1694158/1‑93 (MQ=255)
aGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtct > 2:2491008/1‑93 (MQ=255)
aGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtct > 1:2255434/1‑93 (MQ=255)
aGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtct > 2:161305/1‑93 (MQ=255)
ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc < 2:4524236/93‑1 (MQ=255)
ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc > 2:308426/1‑93 (MQ=255)
ggAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTtctc > 2:4094799/1‑93 (MQ=255)
gaagaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTca > 1:4005904/1‑93 (MQ=255)
gaagaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTca > 1:3038230/1‑93 (MQ=255)
gaagaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTca < 1:4090303/93‑1 (MQ=255)
gaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACaa > 1:231873/1‑93 (MQ=255)
gaaCTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACaa < 1:1078094/93‑1 (MQ=255)
tAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAACAAGCGCCCTTTTTCTCACAATCaa > 1:2950681/1‑93 (MQ=255)
tAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCaa > 2:2388915/1‑93 (MQ=255)
tAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCaa > 2:1503901/1‑93 (MQ=255)
aaaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCaaa < 1:421030/93‑1 (MQ=255)
aaaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCaaa < 1:3667855/93‑1 (MQ=255)
aaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAt < 1:800701/93‑1 (MQ=255)
aaaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAt < 1:2998561/93‑1 (MQ=255)
aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg > 2:4696005/1‑93 (MQ=255)
aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg > 1:3241329/1‑93 (MQ=255)
aaGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATg < 2:2217782/93‑1 (MQ=255)
aGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGa < 2:2955672/93‑1 (MQ=255)
aGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGa < 2:3759669/93‑1 (MQ=255)
gCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGat > 1:4140667/1‑93 (MQ=255)
ggTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCg < 2:3052840/93‑1 (MQ=255)
ggTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCg < 2:3427628/93‑1 (MQ=255)
tCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGc < 1:2736884/93‑1 (MQ=255)
tGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCtt > 2:22986/1‑93 (MQ=255)
tGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCtt > 2:3837653/1‑93 (MQ=255)
tGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCtt > 1:2639222/1‑93 (MQ=255)
tGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCtt > 1:2685345/1‑93 (MQ=255)
gTTAAATTTATATCAGCTTAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCta < 1:4222765/93‑1 (MQ=255)
tAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCtata < 1:131742/93‑1 (MQ=255)
ttATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGaa > 1:4353461/1‑93 (MQ=255)
atatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAt > 2:3353841/1‑93 (MQ=255)
atatCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAt < 1:4687223/93‑1 (MQ=255)
atCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCg > 2:1228539/1‑93 (MQ=255)
tCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGa < 2:3653803/93‑1 (MQ=255)
tCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGa < 1:2178245/93‑1 (MQ=255)
cAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGAt < 2:518749/93‑1 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa > 1:384341/1‑93 (MQ=255)
aGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATa < 1:3469234/93‑1 (MQ=255)
gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACATTCAAATGATCATCGGCTTCTTTAACGAAATCGATAc > 2:3829713/1‑93 (MQ=255)
gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAc < 2:2210439/93‑1 (MQ=255)
gCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAc < 1:715725/93‑1 (MQ=255)
tAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGa > 1:558831/1‑93 (MQ=255)
aaaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAt < 1:3493395/93‑1 (MQ=255)
aaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAtt > 2:4588564/1‑93 (MQ=255)
aaTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAtt > 2:2797408/1‑93 (MQ=255)
aTGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTa < 2:266056/93‑1 (MQ=255)
tGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAg > 2:3738835/1‑93 (MQ=255)
tGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAg < 2:3309997/93‑1 (MQ=255)
gggTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgt < 1:2526660/93‑1 (MQ=255)
gTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgt < 1:642179/93‑1 (MQ=255)
gTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgt > 1:2035832/1‑93 (MQ=255)
tCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgtg < 2:1402924/93‑1 (MQ=255)
cAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgtgt < 1:2616447/93‑1 (MQ=255)
cAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAgtgtgt < 1:4414642/93‑1 (MQ=255)
aGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGtt > 1:2072543/1‑93 (MQ=255)
ggACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTa > 1:2220685/1‑93 (MQ=255)
gACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc < 2:777749/93‑1 (MQ=255)
gACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAc > 1:3486967/1‑93 (MQ=255)
aCGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACt < 1:755446/93‑1 (MQ=255)
ctcTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTc < 2:675756/91‑1 (MQ=255)
cGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTc < 1:4497886/93‑1 (MQ=255)
gCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCg < 2:3251390/93‑1 (MQ=255)
cTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGt > 2:1314368/1‑93 (MQ=255)
ttttAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTc > 1:2614744/1‑93 (MQ=255)
tAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTc < 2:1894390/93‑1 (MQ=255)
tAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTc < 1:4279148/93‑1 (MQ=255)
aaTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTct > 2:2545630/1‑92 (MQ=255)
aaTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCa < 1:1987406/93‑1 (MQ=255)
aaTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCa < 1:3833595/93‑1 (MQ=255)
aaTCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCa > 2:27240/1‑93 (MQ=255)
tCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATc < 1:3424392/93‑1 (MQ=255)
cacaTATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATcc > 1:2392032/1‑93 (MQ=255)
acaTATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCt > 2:4429934/1‑93 (MQ=255)
caTATAAAAAGCGTACTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACTAAATCGATACGGATTAGAGTGTTACTCATCTTCATCCta > 2:2088930/1‑92 (MQ=255)
caTATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTc < 1:3671846/93‑1 (MQ=255)
tataAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa > 1:4281605/1‑93 (MQ=255)
tataAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa > 2:1813278/1‑93 (MQ=255)
tataAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa < 1:289606/93‑1 (MQ=255)
tataAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaa < 1:289605/93‑1 (MQ=255)
taAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaaaa < 1:440635/93‑1 (MQ=255)
taAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCaaaa > 2:449764/1‑93 (MQ=255)
aaaaaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTTATCCTCAAAAc > 1:609838/1‑93 (MQ=255)
aaaaaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAc > 2:4157708/1‑93 (MQ=255)
aaaaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTCCTCGTCTTCATCCTCAAAAcg < 1:2454769/93‑1 (MQ=255)
aaaGCGCCCTTGTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGCTTAGAGTGTTACTCGTCTTCATCCTCAAAActc > 2:4429383/1‑91 (MQ=255)
aaGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAcgcg > 1:2388073/1‑93 (MQ=255)
gcgcCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGcc > 1:3625527/1‑93 (MQ=255)
gcgcCCTTTTTCTCACAATCAAATGATCATCGGCTGCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATTCTCAAAACGCGcc > 1:840013/1‑93 (MQ=255)
|
TATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCA > NC_000913/1892424‑1892604
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
ATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCAC > NC_000913/1892423‑1892605
|
ATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCC > SRR4302544.1761955/1‑94 (MQ=60)
ATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTT < SRR4302544.2926038/94‑1 (MQ=60)
ATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTT < SRR4302544.3989901/94‑1 (MQ=60)
ATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTT > SRR4302544.2072341/1‑94 (MQ=60)
TGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGATTTTAATCACATATAAAAAGCGCCCTTTTT > SRR4302544.2199445/1‑94 (MQ=60)
CAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTGAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCT > SRR4302544.2276654/1‑94 (MQ=60)
CAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCT > SRR4302544.1710875/1‑94 (MQ=60)
CAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCT > SRR4302544.2276653/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCA > SRR4302544.4045766/1‑94 (MQ=60)
GGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCA > SRR4302544.3067308/1‑94 (MQ=60)
GAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCAC < SRR4302544.4130986/94‑1 (MQ=60)
AGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAA > SRR4302544.234290/1‑94 (MQ=60)
GAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAAT < SRR4302544.1088812/94‑1 (MQ=60)
GAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAAT > SRR4302544.4735473/1‑94 (MQ=60)
AACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATC > SRR4302544.3607539/1‑94 (MQ=60)
CTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAACAAGCGCCCTTTTTCTCACAATCAA > SRR4302544.2979025/1‑94 (MQ=60)
CTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAA > SRR4302544.2979026/1‑94 (MQ=60)
TAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAA < SRR4302544.4102367/94‑1 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAT < SRR4302544.425331/94‑1 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAT < SRR4302544.3704433/94‑1 (MQ=60)
AAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAAT < SRR4302544.1843223/94‑1 (MQ=60)
AAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATG < SRR4302544.808472/94‑1 (MQ=60)
AAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATG > SRR4302544.3272354/1‑94 (MQ=60)
AAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATG < SRR4302544.3027312/94‑1 (MQ=60)
AAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGA < SRR4302544.863027/94‑1 (MQ=60)
AGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGAT > SRR4302544.4181658/1‑94 (MQ=60)
TCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCT < SRR4302544.2763265/94‑1 (MQ=60)
CTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTT > SRR4302544.2664521/1‑94 (MQ=60)
CTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTT > SRR4302544.2711080/1‑94 (MQ=60)
GTTAAATTTATATCAGCTTAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTAT < SRR4302544.4265632/94‑1 (MQ=60)
GTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTAT > SRR4302544.4436013/1‑94 (MQ=60)
TAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAA < SRR4302544.132953/94‑1 (MQ=60)
AAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAAC < SRR4302544.1482193/94‑1 (MQ=60)
TTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAA > SRR4302544.4397679/1‑94 (MQ=60)
TATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAAT < SRR4302544.3511867/94‑1 (MQ=60)
ATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATC > SRR4302544.4236959/1‑94 (MQ=60)
ATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATC < SRR4302544.4733550/94‑1 (MQ=60)
TATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCG < SRR4302544.2466761/94‑1 (MQ=60)
TCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGAT < SRR4302544.2198878/94‑1 (MQ=60)
TCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGAT > SRR4302544.3688188/1‑94 (MQ=60)
CAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATA > SRR4302544.388250/1‑94 (MQ=60)
AGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATAC < SRR4302544.3502320/94‑1 (MQ=60)
GCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACG < SRR4302544.722798/94‑1 (MQ=60)
CATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGG > SRR4302544.3780252/1‑94 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACACTCAAATGATCATCGGCTTCTATAACGCAATCGctccggt > SRR4302544.4518670/1‑87 (MQ=60)
ATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGA > SRR4302544.564294/1‑94 (MQ=60)
TAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGAT > SRR4302544.2650136/1‑94 (MQ=60)
AAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATT > SRR4302544.3284680/1‑94 (MQ=60)
AAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATT < SRR4302544.3526704/94‑1 (MQ=60)
GGGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTG < SRR4302544.2550943/94‑1 (MQ=60)
GGTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGT > SRR4302544.2055508/1‑94 (MQ=60)
GTCAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTG < SRR4302544.648525/94‑1 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTT < SRR4302544.4459213/94‑1 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTT < SRR4302544.2641558/94‑1 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTT < SRR4302544.4317189/94‑1 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTT > SRR4302544.2092457/1‑94 (MQ=60)
CAGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTT > SRR4302544.306909/1‑94 (MQ=60)
AGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTA > SRR4302544.785294/1‑94 (MQ=60)
AGGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTA > SRR4302544.2241575/1‑94 (MQ=60)
GGACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTAC > SRR4302544.3520201/1‑94 (MQ=60)
ACGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTC < SRR4302544.762825/94‑1 (MQ=60)
CGCTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCG < SRR4302544.4543027/94‑1 (MQ=60)
CTTTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTC > SRR4302544.2639847/1‑94 (MQ=60)
TTTAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTT < SRR4302544.2768385/94‑1 (MQ=60)
TAATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCA < SRR4302544.4322848/94‑1 (MQ=60)
AATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAT < SRR4302544.2006699/94‑1 (MQ=60)
AATCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCAT < SRR4302544.3871599/94‑1 (MQ=60)
TCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCC < SRR4302544.3457129/94‑1 (MQ=60)
TCACATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCC > SRR4302544.2414695/1‑94 (MQ=60)
CATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCA > SRR4302544.2576102/1‑94 (MQ=60)
CATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCA < SRR4302544.3708469/94‑1 (MQ=60)
ATATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAA > SRR4302544.4325325/1‑94 (MQ=60)
TATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAA > SRR4302544.2070493/1‑94 (MQ=60)
TATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAA < SRR4302544.292603/94‑1 (MQ=60)
TATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAA < SRR4302544.292604/94‑1 (MQ=60)
TATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAA < SRR4302544.292605/94‑1 (MQ=60)
ATAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAA > SRR4302544.2703350/1‑94 (MQ=60)
TAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATGACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAC > SRR4302544.615826/1‑94 (MQ=60)
TAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTTATCCTCAAAAC > SRR4302544.615827/1‑94 (MQ=60)
TAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAC < SRR4302544.445052/94‑1 (MQ=60)
TAAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAAC > SRR4302544.2081568/1‑94 (MQ=60)
AAAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACG < SRR4302544.4385406/94‑1 (MQ=60)
AAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTCCTCGTCTTCATCCTCAAAACGC < SRR4302544.2478182/94‑1 (MQ=60)
AAAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGC > SRR4302544.2410687/1‑94 (MQ=60)
AAAGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCG > SRR4302544.2410686/1‑94 (MQ=60)
AGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCC > SRR4302544.3661649/1‑94 (MQ=60)
AGCGCCCTTTTTCTCACAATCAAATGATCATCGGCTGCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATTCTCAAAACGCGCC > SRR4302544.848303/1‑94 (MQ=60)
GCGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCA < SRR4302544.71241/94‑1 (MQ=60)
CGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCAC > SRR4302544.4757594/1‑94 (MQ=60)
CGCCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCAC < SRR4302544.2294436/94‑1 (MQ=60)
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ATATATGCAGGAAGAACTAAAAGCACTGGTCTGAGTTAAATTTATATCAGCATAAATGGGTCAGGACGCTTTTAATCACATATAAAAAGCGTCCTTTTTCTCACAATCAAATGATCATCGGCTTCTATAACGAAATCGATACGGATTAGTGTGTTACTCGTCTTCATCCTCAAAACGCGCCAC > NC_000913/1892423‑1892605
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
