Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,107,690 |
C→T |
W157* (TGG→TGA) |
rfbC ← |
dTDP‑6‑deoxy‑D‑glucose‑3,5 epimerase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,107,690 | 0 | C | T | 97.1%
| 819.0
/ 2.3
| 241 | W157* (TGG→TGA) | rfbC | dTDP‑6‑deoxy‑D‑glucose‑3,5 epimerase |
| Reads supporting (aligned to +/- strand): ref base C (5/2); new base T (88/145); total (94/147) |
| Fisher's exact test for biased strand distribution p-value = 1.12e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 247 total aligned reads displayed.
TATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGC > NC_000913/2107600‑2107779
|
tATTCATGCAATTACTTTTAATCTGATAAGCTCATCTAACGGAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAAGCCTGATGTTTGGGGTca > 2:2249637/1‑93 (MQ=255)
tATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTca > 1:2992960/1‑93 (MQ=255)
tATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTca > 2:50482/1‑93 (MQ=255)
aTTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTcaa < 2:2409552/93‑1 (MQ=255)
aTTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTcaa < 2:4089953/93‑1 (MQ=255)
aTGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGtcaatcaa < 1:22808/93‑1 (MQ=255)
tGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTcaatcaat < 2:1160712/93‑1 (MQ=255)
gCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAAtt < 1:862682/93‑1 (MQ=255)
gCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAAtt < 1:1973419/93‑1 (MQ=255)
cAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTg < 1:1569198/93‑1 (MQ=255)
aattaattTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGc > 1:2469099/1‑93 (MQ=255)
aattaattTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGc > 1:1488451/1‑93 (MQ=255)
aattaattTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGc > 2:2994359/1‑93 (MQ=255)
attTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGc < 1:3542656/93‑1 (MQ=255)
ttAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGtt > 2:4092418/1‑93 (MQ=255)
cTGATAAGCTCATCTAACGTGAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTtcatca < 2:2001281/93‑1 (MQ=255)
tGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTcatcat < 2:4630275/93‑1 (MQ=255)
aTAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTc < 1:4595029/93‑1 (MQ=255)
aTAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTc < 1:1143374/93‑1 (MQ=255)
tAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGTATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTcc > 1:3191000/1‑93 (MQ=255)
tAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTcc > 1:4033469/1‑93 (MQ=255)
tAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTcc > 2:2563768/1‑93 (MQ=255)
aaGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCa > 2:199899/1‑93 (MQ=255)
aaGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCa < 2:746385/93‑1 (MQ=255)
aGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCaa > 2:2154681/1‑93 (MQ=255)
aGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCaa > 2:3531167/1‑93 (MQ=255)
aGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCaa > 1:3624699/1‑93 (MQ=255)
gCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAAc < 1:2934715/93‑1 (MQ=255)
tCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACat < 1:2340575/93‑1 (MQ=255)
aTCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACatat > 1:2829713/1‑93 (MQ=255)
aTCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACatat < 2:3967753/93‑1 (MQ=255)
tCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATAtt > 1:3762518/1‑93 (MQ=255)
tCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATAtt < 1:1692183/93‑1 (MQ=255)
cTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTc > 2:862676/1‑93 (MQ=255)
tAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTcc > 2:1804368/1‑93 (MQ=255)
aaCGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCca < 1:272580/93‑1 (MQ=255)
aCGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCcac > 1:2979971/1‑93 (MQ=255)
gTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACaa < 2:3778185/93‑1 (MQ=255)
gTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACaa < 1:1538996/93‑1 (MQ=255)
gTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACaa < 2:2117455/93‑1 (MQ=255)
gTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACaa > 1:4144353/1‑93 (MQ=255)
tAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAAt < 2:4095288/93‑1 (MQ=255)
agagCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGc < 2:1086553/93‑1 (MQ=255)
gagCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCt > 1:3871264/1‑93 (MQ=255)
agCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCtt > 2:3346540/1‑93 (MQ=255)
agCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCtt < 1:1099884/93‑1 (MQ=255)
ccTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGGCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTc > 2:3167712/1‑93 (MQ=255)
cTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCa > 2:4158883/1‑93 (MQ=255)
tttCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCATCATATTCCACAATCGCTTTCAg > 1:2448165/1‑93 (MQ=255)
tttCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAg > 1:89170/1‑93 (MQ=255)
tttCATCTGTTGGCGAAAGGATTCACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAg < 2:2633276/93‑1 (MQ=255)
ttCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAgg < 2:3746127/93‑1 (MQ=255)
tCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGga < 1:3066039/93‑1 (MQ=255)
cATCTTTTGGCGAAAGGATTAACCTTAATGTTTGGGGCAAATAATTTGCAATGGGTTCATATTTCCACAATATTCACCAATCGCTTTCAggtg > 1:2332243/1‑91 (MQ=255)
cATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgat > 1:1358555/1‑93 (MQ=255)
cATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgat > 2:611021/1‑93 (MQ=255)
aTCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgatg < 1:3522292/93‑1 (MQ=255)
tCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgatga > 2:4506583/1‑93 (MQ=255)
tCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgatga < 2:3556877/93‑1 (MQ=255)
tCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgatga < 1:2519159/93‑1 (MQ=255)
tCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgatga < 1:219857/93‑1 (MQ=255)
cTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGgatgat > 1:2672357/1‑93 (MQ=255)
ttttGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGata > 1:957764/1‑93 (MQ=255)
ttttGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGata > 2:285914/1‑93 (MQ=255)
tttGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGataa < 2:3890434/93‑1 (MQ=255)
ttGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGataat < 1:4712195/93‑1 (MQ=255)
ttGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGataat > 2:1819317/1‑93 (MQ=255)
ttGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGataat < 2:1437783/93‑1 (MQ=255)
tGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGataata < 1:929615/93‑1 (MQ=255)
tGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGataata < 1:3461349/93‑1 (MQ=255)
tGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGataata < 2:1309300/93‑1 (MQ=255)
ggCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAg < 1:4532213/93‑1 (MQ=255)
gCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGt < 2:310771/93‑1 (MQ=255)
cGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGtt < 2:3272101/93‑1 (MQ=255)
cGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGtt < 1:3798802/93‑1 (MQ=255)
cGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGtt < 2:2484222/93‑1 (MQ=255)
gAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGttt > 2:2463006/1‑93 (MQ=255)
aaaGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTg > 1:71832/1‑93 (MQ=255)
aaGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGt < 1:3781577/93‑1 (MQ=255)
aaGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATAATTCCAACATATTCCTCAATCGCTTTCAGGATGATACTAGTTTGt > 1:1939943/1‑93 (MQ=255)
aGGATTAGCCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTa < 2:4645965/93‑1 (MQ=255)
aGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTa < 2:2098512/93‑1 (MQ=255)
aGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTa < 1:1075332/93‑1 (MQ=255)
gATTAGCCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGt < 1:4702233/93‑1 (MQ=255)
gATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGt < 2:3712882/93‑1 (MQ=255)
aTTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGtt < 1:3366726/93‑1 (MQ=255)
ttAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGttt < 2:4331380/93‑1 (MQ=255)
tAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGtttt < 1:763139/93‑1 (MQ=255)
tAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGtttt < 1:402519/93‑1 (MQ=255)
tAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCAACATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGtttt < 2:2781974/93‑1 (MQ=255)
aCCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTtat > 2:928659/1‑93 (MQ=255)
aCCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTtat > 1:2006889/1‑93 (MQ=255)
cTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATAtt < 2:4390124/93‑1 (MQ=255)
cTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATAtt < 2:1744581/93‑1 (MQ=255)
cTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATAtt < 1:2146188/93‑1 (MQ=255)
tGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGaaa < 1:923002/93‑1 (MQ=255)
tttGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTATTTTTATATTGAAAtt < 2:2931225/93‑1 (MQ=255)
tttGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAAtt < 1:4301221/93‑1 (MQ=255)
ggggTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAg > 1:2297488/1‑93 (MQ=255)
gggTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGc < 1:965903/93‑1 (MQ=255)
|
TATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGC > NC_000913/2107600‑2107779
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGTATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGCGAT > NC_000913/2107598‑2107782
|
CGTATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTC < SRR4302544.3217027/94‑1 (MQ=60)
GTATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCA > SRR4302544.3021660/1‑94 (MQ=60)
GTATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCA < SRR4302544.1327375/94‑1 (MQ=60)
ATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAAT < SRR4302544.2520919/94‑1 (MQ=60)
ATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAAT < SRR4302544.2007558/94‑1 (MQ=60)
ATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCATGATGTTTGGGGTCAAT < SRR4302544.3306651/94‑1 (MQ=60)
TCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCA < SRR4302544.4703895/94‑1 (MQ=60)
TCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCA < SRR4302544.1119380/94‑1 (MQ=60)
CATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAA < SRR4302544.2340089/94‑1 (MQ=60)
ATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAAT < SRR4302544.23031/94‑1 (MQ=60)
ATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAAT < SRR4302544.23030/94‑1 (MQ=60)
TGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATT < SRR4302544.3825356/94‑1 (MQ=60)
GCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTG < SRR4302544.4383795/94‑1 (MQ=60)
GCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTG < SRR4302544.1992600/94‑1 (MQ=60)
GCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTG < SRR4302544.1992599/94‑1 (MQ=60)
GCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTG < SRR4302544.871217/94‑1 (MQ=60)
CAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGC < SRR4302544.1584734/94‑1 (MQ=60)
CAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGC > SRR4302544.1503166/1‑94 (MQ=60)
CAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGC > SRR4302544.2492691/1‑94 (MQ=60)
CAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGC > SRR4302544.1503165/1‑94 (MQ=60)
ATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAA < SRR4302544.2382458/94‑1 (MQ=60)
TTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAAT < SRR4302544.4282296/94‑1 (MQ=60)
TAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATG > SRR4302544.1526446/1‑94 (MQ=60)
AATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGC < SRR4302544.285877/94‑1 (MQ=60)
AATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTGTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGC < SRR4302544.830941/94‑1 (MQ=60)
ATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCG < SRR4302544.3576575/94‑1 (MQ=60)
TTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGT < SRR4302544.365515/94‑1 (MQ=60)
TTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGT > SRR4302544.3647975/1‑94 (MQ=60)
TAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCA < SRR4302544.2358383/94‑1 (MQ=60)
TAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCA > SRR4302544.2492124/1‑94 (MQ=60)
AATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCAT < SRR4302544.268095/94‑1 (MQ=60)
ATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATC < SRR4302544.2490242/94‑1 (MQ=60)
CTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCAT < SRR4302544.3010000/94‑1 (MQ=60)
CTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCAT > SRR4302544.2701759/1‑94 (MQ=60)
CTGATAAGATCATCTAACGTAAAGAGCCTTCGATCTTTTGGTGAAAGGATTAACCCTGATCTTTGGGGTCAATCAATTGAAATGCGTTgctcac > SRR4302544.2701758/1‑88 (MQ=60)
GATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTC > SRR4302544.514925/1‑94 (MQ=60)
ATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGTATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCC > SRR4302544.3221403/1‑94 (MQ=60)
ATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGTATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCC > SRR4302544.3221404/1‑94 (MQ=60)
ATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCC < SRR4302544.4640733/94‑1 (MQ=60)
ATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCC > SRR4302544.4073647/1‑94 (MQ=60)
ATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCC < SRR4302544.1154741/94‑1 (MQ=60)
TAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCA < SRR4302544.1864457/94‑1 (MQ=60)
AAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAA > SRR4302544.1578991/1‑94 (MQ=60)
AAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAA > SRR4302544.3660817/1‑94 (MQ=60)
AGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAAC < SRR4302544.1610684/94‑1 (MQ=60)
GCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACA < SRR4302544.2962906/94‑1 (MQ=60)
GCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACA < SRR4302544.2962905/94‑1 (MQ=60)
CTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCACCAT > SRR4302544.1104883/1‑94 (MQ=60)
TCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATA < SRR4302544.2362748/94‑1 (MQ=60)
CATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATAT > SRR4302544.2857052/1‑94 (MQ=60)
ATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATT > SRR4302544.3799855/1‑94 (MQ=60)
TCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTC < SRR4302544.1708879/94‑1 (MQ=60)
TCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTCCATCATTCCAACATATTC < SRR4302544.1708878/94‑1 (MQ=60)
AACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCAC < SRR4302544.275447/94‑1 (MQ=60)
AACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCAC > SRR4302544.785778/1‑94 (MQ=60)
AACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCAC > SRR4302544.3008552/1‑94 (MQ=60)
CGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAA > SRR4302544.4185380/1‑94 (MQ=60)
GTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAAT < SRR4302544.1554288/94‑1 (MQ=60)
GTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAAT < SRR4302544.3741660/94‑1 (MQ=60)
AGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCT > SRR4302544.3909708/1‑94 (MQ=60)
GAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTT < SRR4302544.3039500/94‑1 (MQ=60)
AGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTT > SRR4302544.2618725/1‑94 (MQ=60)
AGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTT < SRR4302544.1110838/94‑1 (MQ=60)
CTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCATCATATTCCACAATCGCTTTCAG > SRR4302544.2471518/1‑94 (MQ=60)
CTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAG > SRR4302544.90011/1‑94 (MQ=60)
CTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAG > SRR4302544.1285986/1‑94 (MQ=60)
CTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAG > SRR4302544.3225176/1‑94 (MQ=60)
TTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGG < SRR4302544.3801749/94‑1 (MQ=60)
TTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGA > SRR4302544.45942/1‑94 (MQ=60)
TCATCTTTTGGCGAAAGGATTAACCTTAATGTTTGGGGCAAATAATTTGCAATGGGTTCATATTTCCACAATATTCACCAATCGCTTTCAGGtg > SRR4302544.2354358/1‑92 (MQ=20)
TCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGAT < SRR4302544.3095270/94‑1 (MQ=60)
TCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGAT > SRR4302544.1372040/1‑94 (MQ=60)
CATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATG < SRR4302544.3847590/94‑1 (MQ=60)
ATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGA < SRR4302544.3555942/94‑1 (MQ=60)
ATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGA < SRR4302544.3555941/94‑1 (MQ=60)
TCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGAT < SRR4302544.2543356/94‑1 (MQ=60)
TCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGAT > SRR4302544.2697975/1‑94 (MQ=60)
TCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGAT < SRR4302544.222133/94‑1 (MQ=60)
CTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATA > SRR4302544.442108/1‑94 (MQ=60)
CTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATA > SRR4302544.967175/1‑94 (MQ=60)
TTTTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAA < SRR4302544.3487097/94‑1 (MQ=60)
TTTGGCGAAAGGATTAACCCTGGTGGTTTGGGTTAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAAT < SRR4302544.3494480/94‑1 (MQ=60)
TTGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATA < SRR4302544.4758746/94‑1 (MQ=60)
TGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAG < SRR4302544.938777/94‑1 (MQ=60)
TGGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAG < SRR4302544.3494385/94‑1 (MQ=60)
GGCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGT < SRR4302544.4577543/94‑1 (MQ=60)
GGCGAAAGGATTAACCCAGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGT < SRR4302544.729676/94‑1 (MQ=60)
GCGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTT < SRR4302544.96893/94‑1 (MQ=60)
CGAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTT < SRR4302544.3836423/94‑1 (MQ=60)
GAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTG > SRR4302544.875031/1‑94 (MQ=60)
GAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTG < SRR4302544.960914/94‑1 (MQ=60)
GAAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTG > SRR4302544.72527/1‑94 (MQ=60)
AAAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATAATTCCAACATATTCCTCAATCGCTTTCAGGATGATACTAGTTTGT > SRR4302544.1958722/1‑94 (MQ=60)
AAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTA < SRR4302544.925404/94‑1 (MQ=60)
AAGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTA < SRR4302544.3819029/94‑1 (MQ=60)
AGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAG < SRR4302544.3058134/94‑1 (MQ=60)
AGGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAG < SRR4302544.1086024/94‑1 (MQ=60)
GGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGT > SRR4302544.1983711/1‑94 (MQ=60)
GGATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGT > SRR4302544.92896/1‑94 (MQ=60)
GATTAGCCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTT < SRR4302544.4748707/94‑1 (MQ=60)
GATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTT < SRR4302544.1525429/94‑1 (MQ=60)
GATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTT < SRR4302544.3828310/94‑1 (MQ=60)
ATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTT < SRR4302544.3398864/94‑1 (MQ=60)
ATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTT < SRR4302544.4109862/94‑1 (MQ=60)
ATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTT > SRR4302544.580396/1‑94 (MQ=60)
ATTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTT < SRR4302544.2779801/94‑1 (MQ=60)
TTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATCGTTTGTAGTTTT > SRR4302544.2273987/1‑94 (MQ=60)
TTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTT > SRR4302544.2273988/1‑94 (MQ=60)
TTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTT < SRR4302544.3506885/94‑1 (MQ=60)
TTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTT > SRR4302544.2858211/1‑94 (MQ=60)
TTAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTT < SRR4302544.4756284/94‑1 (MQ=60)
TAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTA < SRR4302544.770579/94‑1 (MQ=60)
TAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTA < SRR4302544.406609/94‑1 (MQ=60)
TAACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTA < SRR4302544.406610/94‑1 (MQ=60)
AACCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTAT > SRR4302544.2999640/1‑94 (MQ=60)
AACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTAT > SRR4302544.2026387/1‑94 (MQ=60)
CCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATAT < SRR4302544.3934483/94‑1 (MQ=60)
CCCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATAT < SRR4302544.3934482/94‑1 (MQ=60)
CCTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATT > SRR4302544.2128339/1‑94 (MQ=60)
CTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTG > SRR4302544.1296243/1‑94 (MQ=60)
CTGATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTG < SRR4302544.2166641/94‑1 (MQ=60)
GATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAA < SRR4302544.2085113/94‑1 (MQ=60)
ATGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGATTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAA < SRR4302544.4183978/94‑1 (MQ=60)
TGTTTGGTGTCAATCGATTGCAATGCGTTCATCATTCCAACATAATCCACAATCGCTTGCAGGATGATAATAGTTTGTAGTTTTATATTGAAAT < SRR4302544.932103/94‑1 (MQ=60)
TGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAAT < SRR4302544.2173898/94‑1 (MQ=60)
TGTTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAAT < SRR4302544.932102/94‑1 (MQ=60)
TTTGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTC < SRR4302544.4345102/94‑1 (MQ=60)
TGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAG > SRR4302544.2319164/1‑94 (MQ=60)
TGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAG < SRR4302544.4746807/94‑1 (MQ=60)
TGGGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAACCGCTTTCAGGATGCTAATATTTTGTAGTTTTATATTGGAATTCAG > SRR4302544.2319165/1‑94 (MQ=60)
GGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGCG < SRR4302544.975378/94‑1 (MQ=60)
GGGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGCG < SRR4302544.975377/94‑1 (MQ=60)
GGTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGCGA < SRR4302544.3760528/94‑1 (MQ=60)
GTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGCGAT < SRR4302544.2984150/94‑1 (MQ=60)
GTCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGCGAT < SRR4302544.2984149/94‑1 (MQ=60)
|
CGTATTCATGCAATTAATTTTAATCTGATAAGCTCATCTAACGTAAAGAGCCTTTCATCTTTTGGCGAAAGGATTAACCCTGATGTTTGGGGCCAATCAATTGCAATGCGTTCATCATTCCAACATATTCCACAATCGCTTTCAGGATGATAATAGTTTGTAGTTTTATATTGAAATTCAGCGAT > NC_000913/2107598‑2107782
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
