Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,195,623 |
T→C |
intergenic (+1270/‑2676) |
metG → / → yehI |
methionine tRNA synthetase/putative regulator |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,195,623 | 0 | T | C | 99.5%
| 637.0
/ ‑5.1
| 193 | intergenic (+1270/‑2676) | metG/yehI | methionine tRNA synthetase/putative regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (109/83); total (109/84) |
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.46e-01 |
Only 100 of 196 total aligned reads displayed.
ATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC > NC_000913/2195533‑2195712
|
tgaGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCAtt > 2:1777564/1‑93 (MQ=255)
gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACa < 2:1048620/93‑1 (MQ=255)
gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACa < 2:1623691/93‑1 (MQ=255)
gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACa < 2:1274925/93‑1 (MQ=255)
gCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACa > 2:3944670/1‑93 (MQ=255)
acaTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAgg > 2:305104/1‑93 (MQ=255)
caTTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGa < 2:3407315/93‑1 (MQ=255)
ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc > 2:465825/1‑93 (MQ=255)
ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc > 2:2905626/1‑93 (MQ=255)
ttCTTGCCTCATTAGAAAAATATCACGAACCATATGCCAATTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGc > 1:1468235/1‑93 (MQ=255)
tCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCa > 2:151185/1‑93 (MQ=255)
tCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCa > 1:2334649/1‑93 (MQ=255)
cTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCaa < 2:1367010/93‑1 (MQ=255)
cTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCaa < 2:2103339/93‑1 (MQ=255)
ttGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAg > 1:1326088/1‑93 (MQ=255)
tGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAgg > 2:1582527/1‑93 (MQ=255)
tGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAgg > 1:1446044/1‑93 (MQ=255)
tGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAgg > 2:4547503/1‑93 (MQ=255)
tGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAgg > 1:3271569/1‑93 (MQ=255)
cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt < 1:1839104/93‑1 (MQ=255)
cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt > 1:4221555/1‑93 (MQ=255)
cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt > 2:1060009/1‑93 (MQ=255)
cTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGgtgt < 2:2775064/93‑1 (MQ=255)
tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt > 1:2073977/1‑93 (MQ=255)
tCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGtt > 1:392007/1‑93 (MQ=255)
cATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTg < 1:1130827/93‑1 (MQ=255)
aTTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGc < 1:2689054/93‑1 (MQ=255)
aTTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGc < 2:3053822/93‑1 (MQ=255)
ttAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCa < 2:3980712/93‑1 (MQ=255)
tAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑g > 1:498362/1‑93 (MQ=255)
aGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑Gc < 2:2241609/93‑1 (MQ=255)
aGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑Gc < 2:3636282/93‑1 (MQ=255)
aaaaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCt > 2:545476/1‑93 (MQ=255)
aaaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTg > 2:2111015/1‑93 (MQ=255)
aaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGc > 2:4429576/1‑93 (MQ=255)
aaTATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGc > 2:3771143/1‑93 (MQ=255)
tatCACTAACCATATGCCATTTTAGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCG‑GCCCTGccc < 2:2593768/93‑1 (MQ=255)
tatCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGccc > 2:3338203/1‑93 (MQ=255)
atCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTTcccc < 2:4137152/93‑1 (MQ=255)
atCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGcccc > 1:25449/1‑93 (MQ=255)
atCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGcccc < 2:1935165/93‑1 (MQ=255)
tCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCg > 1:2750279/1‑93 (MQ=255)
cACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGa < 1:3214395/93‑1 (MQ=255)
cACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGa < 2:1314014/93‑1 (MQ=255)
cGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGAtt < 2:3151436/93‑1 (MQ=255)
gAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGAttt > 1:3936054/1‑93 (MQ=255)
aCCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGc > 2:1671364/1‑93 (MQ=255)
aCCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGc < 1:335962/93‑1 (MQ=255)
ccATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCt > 2:1419006/1‑93 (MQ=255)
cATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTc < 1:1107061/93‑1 (MQ=255)
cATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTc > 1:2867288/1‑93 (MQ=255)
cATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTc > 1:126648/1‑93 (MQ=255)
atatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTcc > 1:853217/1‑93 (MQ=255)
atatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTcc > 2:2453109/1‑93 (MQ=255)
atatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGGGTTGCAGGCCCTCCCCCGtttttttc > 1:4551520/1‑89 (MQ=255)
tatGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTccc > 1:1876693/1‑93 (MQ=255)
atGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCt > 1:1065651/1‑93 (MQ=255)
atGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCt < 2:381755/93‑1 (MQ=255)
ccATTTTTGATGATTACTATTGTGGTGCGAGATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTAtc > 1:1496626/1‑92 (MQ=255)
cATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGc < 1:4710123/93‑1 (MQ=255)
cATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGc > 1:1618897/1‑93 (MQ=255)
aTTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGcc > 2:1268296/1‑93 (MQ=255)
aTTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGcc > 2:4650264/1‑93 (MQ=255)
tttttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCg > 1:3713033/1‑93 (MQ=255)
ttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCaa > 1:4123555/1‑93 (MQ=255)
ttGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCaa > 1:3998355/1‑93 (MQ=255)
gatgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGt < 1:4563394/93‑1 (MQ=255)
gatgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGt > 2:2892361/1‑93 (MQ=255)
gatgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGt < 1:2189052/93‑1 (MQ=255)
tgatTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGa > 2:1358937/1‑93 (MQ=255)
atTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGact > 1:213293/1‑93 (MQ=255)
tACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactac > 1:3075096/1‑93 (MQ=255)
tACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactac > 2:335472/1‑93 (MQ=255)
tACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactac < 1:2241853/93‑1 (MQ=255)
aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact < 1:1373229/93‑1 (MQ=255)
aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact < 2:3795321/93‑1 (MQ=255)
aCTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGactact < 2:2819141/93‑1 (MQ=255)
tATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgc < 1:760304/93‑1 (MQ=255)
tATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTgc < 1:2888367/93‑1 (MQ=255)
tggtgCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGa > 2:1707757/1‑93 (MQ=255)
ggtgCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAt > 1:2255584/1‑93 (MQ=255)
ggtgCGATATGGTCAGCCACCGCATTACAGGAGCAAGGAGTTGCA‑GCCCTGCCCCGTTTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAt > 2:1239995/1‑93 (MQ=255)
cGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATgtgt < 1:2374456/93‑1 (MQ=255)
cGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATgtgt < 1:1547026/93‑1 (MQ=255)
cGATAGGGGCAGCCTCCGCATTACAGGAGCAAGGTGTTGCC‑TCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATgtgt < 1:2819924/93‑1 (MQ=255)
gATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGtt > 2:2647763/1‑93 (MQ=255)
gATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGtt > 1:4671981/1‑93 (MQ=255)
tatGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGc < 1:1978771/93‑1 (MQ=255)
tGGGCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGt > 2:857051/1‑93 (MQ=255)
gTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCa > 1:245964/1‑93 (MQ=255)
cAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCata < 2:2321947/93‑1 (MQ=255)
cAGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCata < 1:3283454/93‑1 (MQ=255)
aGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCatat < 2:4029186/93‑1 (MQ=255)
aGCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCatat > 2:3492148/1‑93 (MQ=255)
gCCACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatc > 1:561426/1‑93 (MQ=255)
ccACCGCATGACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatca < 2:359215/93‑1 (MQ=255)
cACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaa > 2:4289169/1‑93 (MQ=255)
cACCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaa > 1:116212/1‑93 (MQ=255)
aCCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaat < 1:3252280/93‑1 (MQ=255)
aCCGCATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATatcaat > 1:2404656/1‑93 (MQ=255)
|
ATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCA‑GCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC > NC_000913/2195533‑2195712
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC > NC_000913/2195530‑2195716
|
CTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGC > SRR4302544.1110625/1‑94 (MQ=60)
TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCA < SRR4302544.509395/94‑1 (MQ=60)
TGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCA > SRR4302544.3895006/1‑94 (MQ=60)
TGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTA > SRR4302544.568240/1‑94 (MQ=60)
GAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTAC < SRR4302544.4756060/94‑1 (MQ=60)
AGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACA < SRR4302544.1206832/94‑1 (MQ=60)
GCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAG < SRR4302544.2502161/94‑1 (MQ=60)
GCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAG > SRR4302544.1168528/1‑94 (MQ=60)
CACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGG < SRR4302544.2465602/94‑1 (MQ=60)
CACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGG > SRR4302544.4125395/1‑94 (MQ=60)
CATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAG > SRR4302544.2394710/1‑94 (MQ=60)
ATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCAATTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGC > SRR4302544.1482791/1‑94 (MQ=60)
TTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCA > SRR4302544.2356782/1‑94 (MQ=60)
CTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAG > SRR4302544.1339127/1‑94 (MQ=60)
TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG > SRR4302544.1460425/1‑94 (MQ=60)
TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG < SRR4302544.1463929/94‑1 (MQ=60)
TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG > SRR4302544.3302770/1‑94 (MQ=60)
TTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGG > SRR4302544.534785/1‑94 (MQ=60)
GCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTG < SRR4302544.2962559/94‑1 (MQ=60)
CCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGT > SRR4302544.4264374/1‑94 (MQ=60)
CCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGT > SRR4302544.4606156/1‑94 (MQ=60)
CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT > SRR4302544.2093908/1‑94 (MQ=60)
CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT < SRR4302544.1856946/94‑1 (MQ=60)
CTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTT > SRR4302544.395982/1‑94 (MQ=60)
CATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGC < SRR4302544.1142092/94‑1 (MQ=60)
ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA > SRR4302544.2308498/1‑94 (MQ=60)
ATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCA < SRR4302544.2714842/94‑1 (MQ=60)
TTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAG > SRR4302544.503257/1‑94 (MQ=60)
AGAAAAATATTACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCC > SRR4302544.2575031/1‑94 (MQ=60)
AGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCC > SRR4302544.2083497/1‑94 (MQ=60)
AGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCC < SRR4302544.1306306/94‑1 (MQ=60)
AATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCC > SRR4302544.1508913/1‑94 (MQ=60)
AATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCC > SRR4302544.3984572/1‑94 (MQ=60)
TATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCC > SRR4302544.25695/1‑94 (MQ=60)
ATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCG > SRR4302544.2776768/1‑94 (MQ=60)
CACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAT < SRR4302544.3245054/94‑1 (MQ=60)
CACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAT > SRR4302544.2197630/1‑94 (MQ=60)
CACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTAAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGAT > SRR4302544.3730509/1‑94 (MQ=60)
CGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTT > SRR4302544.3975138/1‑94 (MQ=60)
ACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCT < SRR4302544.339444/94‑1 (MQ=60)
ACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCT < SRR4302544.339445/94‑1 (MQ=60)
CCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTC > SRR4302544.2894968/1‑94 (MQ=60)
CCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTC > SRR4302544.127814/1‑94 (MQ=60)
CATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCC > SRR4302544.2137725/1‑94 (MQ=60)
CATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCC < SRR4302544.1118098/94‑1 (MQ=60)
CATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCC > SRR4302544.861655/1‑94 (MQ=60)
CATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGGGTTGCAGgccctcccccgtttttttc > SRR4302544.4596958/1‑75 (MQ=60)
ATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCC > SRR4302544.1894838/1‑94 (MQ=60)
TATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCT > SRR4302544.1076246/1‑94 (MQ=60)
ATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTA < SRR4302544.1521391/94‑1 (MQ=60)
TGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTAT > SRR4302544.3310512/1‑94 (MQ=60)
GCCATTTTTGATGATTACTATTGTGGTGCGAGATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATC > SRR4302544.1511426/1‑94 (MQ=60)
CCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGC > SRR4302544.1634849/1‑94 (MQ=60)
CATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCC < SRR4302544.4756655/94‑1 (MQ=60)
ATTTTTGATGATTTCTATTGGGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG < SRR4302544.808285/94‑1 (MQ=60)
ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG > SRR4302544.3749967/1‑94 (MQ=60)
ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG < SRR4302544.1888689/94‑1 (MQ=60)
ATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCG > SRR4302544.993304/1‑94 (MQ=60)
TTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAA > SRR4302544.4164471/1‑94 (MQ=60)
TTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAA > SRR4302544.4038146/1‑94 (MQ=60)
TTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAG < SRR4302544.3289017/94‑1 (MQ=60)
TTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAG < SRR4302544.1121654/94‑1 (MQ=60)
GATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTG < SRR4302544.4608892/94‑1 (MQ=60)
GATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTG < SRR4302544.2209736/94‑1 (MQ=60)
ATGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGA > SRR4302544.2888356/1‑94 (MQ=60)
TGATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAC > SRR4302544.1935111/1‑94 (MQ=60)
GATTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACT > SRR4302544.215484/1‑94 (MQ=60)
TTACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTAC > SRR4302544.3104401/1‑94 (MQ=60)
TACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACT < SRR4302544.2262943/94‑1 (MQ=60)
ACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG < SRR4302544.1386914/94‑1 (MQ=60)
ACTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTG > SRR4302544.4671566/1‑94 (MQ=60)
CTATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGC < SRR4302544.1386191/94‑1 (MQ=60)
TATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCG < SRR4302544.767717/94‑1 (MQ=60)
TATTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCG < SRR4302544.2916212/94‑1 (MQ=60)
TTGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCC < SRR4302544.1455535/94‑1 (MQ=60)
TGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCG > SRR4302544.496962/1‑94 (MQ=60)
TGTGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCG < SRR4302544.4169992/94‑1 (MQ=60)
TGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAT > SRR4302544.2276805/1‑94 (MQ=60)
TGGTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGAT > SRR4302544.2276806/1‑94 (MQ=60)
GTGCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGT < SRR4302544.3967676/94‑1 (MQ=60)
GCGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGT < SRR4302544.3273532/94‑1 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT < SRR4302544.1562432/94‑1 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT < SRR4302544.2847157/94‑1 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT > SRR4302544.4718155/1‑94 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT < SRR4302544.2396933/94‑1 (MQ=60)
CGATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT > SRR4302544.1590745/1‑94 (MQ=60)
CGATAGGGGCAGCCTCCGCATTACAGGAGCAAGGTGTTGCCTCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTT < SRR4302544.2847158/94‑1 (MQ=60)
ATATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGC < SRR4302544.395312/94‑1 (MQ=60)
TATGGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCG < SRR4302544.1997997/94‑1 (MQ=60)
GGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCA > SRR4302544.2243962/1‑94 (MQ=60)
GGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCA > SRR4302544.2911436/1‑94 (MQ=60)
GGTCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCA > SRR4302544.248537/1‑94 (MQ=60)
TCAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGGTGCGTCATA > SRR4302544.1767544/1‑94 (MQ=60)
CAGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATAT < SRR4302544.3314740/94‑1 (MQ=60)
AGCCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATC > SRR4302544.566913/1‑94 (MQ=60)
CCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAA > SRR4302544.2408149/1‑94 (MQ=60)
CCACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAA > SRR4302544.117272/1‑94 (MQ=60)
CACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAAT > SRR4302544.2427481/1‑94 (MQ=60)
ACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC > SRR4302544.4583237/1‑94 (MQ=60)
ACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC < SRR4302544.3283390/94‑1 (MQ=60)
ACCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATC > SRR4302544.312544/1‑94 (MQ=60)
CCGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCA > SRR4302544.1714320/1‑94 (MQ=60)
CGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCAT > SRR4302544.396618/1‑94 (MQ=60)
CGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGAATACTGCGCCGCTGTGTTGCGTCATATCAATCAT > SRR4302544.1907845/1‑94 (MQ=60)
CGCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTACCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCAT > SRR4302544.632357/1‑94 (MQ=60)
GCATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATC < SRR4302544.169784/94‑1 (MQ=60)
CATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC > SRR4302544.3890951/1‑94 (MQ=60)
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CTGATGAGCACATTCTTGCCTCATTAGAAAAATATCACGAACCATATGCCATTTTTGATGATTACTATTGTGGTGCGATATGGTCAGCCACCGTATTACAGGAGCAAGGTGTTGCAGCCCTGCCCCGATTTGCTCCCTATGCCGCAAGTGACTACTGCGCCGATGTGTTGCGTCATATCAATCATCC > NC_000913/2195530‑2195716
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
