Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,276,343 |
T→C |
intergenic (‑86/+247) |
yejG ← / ← bcr |
hypothetical protein/bicyclomycin resistance protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,276,343 | 0 | T | C | 98.2%
| 528.1
/ ‑1.6
| 165 | intergenic (‑86/+247) | yejG/bcr | hypothetical protein/bicyclomycin resistance protein |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (88/74); total (89/76) |
| Fisher's exact test for biased strand distribution p-value = 5.95e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 167 total aligned reads displayed.
GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC > NC_000913/2276253‑2276432
|
gTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaa < 1:2021518/93‑1 (MQ=255)
tctcTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa < 1:3261683/90‑1 (MQ=255)
tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTaaa > 1:4038564/1‑93 (MQ=255)
tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa > 2:1466933/1‑93 (MQ=255)
tCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa < 1:730028/93‑1 (MQ=255)
gcACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCaaa < 2:4134210/92‑1 (MQ=255)
cACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAg > 2:573704/1‑93 (MQ=255)
ttATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAtt < 2:726082/93‑1 (MQ=255)
ttATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAtt < 1:3771803/93‑1 (MQ=255)
ttATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAtt > 1:2458216/1‑93 (MQ=255)
ttATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGAtt > 1:2639838/1‑93 (MQ=255)
aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa > 2:3120054/1‑93 (MQ=255)
aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa < 2:4182638/93‑1 (MQ=255)
aTTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTCTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGa < 1:4548664/93‑1 (MQ=255)
ttttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAt > 1:4300475/1‑93 (MQ=255)
ttttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAt > 2:2287266/1‑93 (MQ=255)
ttttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAt > 2:3726519/1‑93 (MQ=255)
tttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATg < 1:1111713/93‑1 (MQ=255)
ttcccccGGAAGCACATCCACTTCACAATTTGTTTACATCAATTTTAACACATCAGCAACAATCCGTCTTTATACAGATCGCAAAGATTGATg < 2:330552/90‑1 (MQ=255)
ttCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGc < 1:2352876/93‑1 (MQ=255)
tCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGcc < 1:2268705/93‑1 (MQ=255)
cccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTc < 1:1308429/93‑1 (MQ=255)
cccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTc > 2:68938/1‑93 (MQ=255)
ccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCg > 2:1066957/1‑93 (MQ=255)
ccGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCg > 2:2099827/1‑93 (MQ=255)
cGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGc > 2:2388051/1‑93 (MQ=255)
ggAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGcc > 1:1538036/1‑93 (MQ=255)
ggAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGcc > 2:451108/1‑93 (MQ=255)
gAAGCACATTCACTTCACAATTTGTTTACATAAATTTTAACACATCATCAACAATCGGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCt > 1:1064549/1‑93 (MQ=255)
aaGCACATTCACTTCACAATTTGTTTCCATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTg < 2:3196852/93‑1 (MQ=255)
aaGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTg > 1:2987157/1‑93 (MQ=255)
aaGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTg > 1:159433/1‑93 (MQ=255)
acaTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTg < 2:4301711/93‑1 (MQ=255)
aTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGc > 1:279481/1‑93 (MQ=255)
aTTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGc < 1:1444295/93‑1 (MQ=255)
tcacttcacAATTTGTTTACAGGAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCct > 1:841607/1‑93 (MQ=255)
acttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCctct < 1:704593/93‑1 (MQ=255)
cttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTa < 2:3486596/93‑1 (MQ=255)
cttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTa > 1:4243231/1‑93 (MQ=255)
cttcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTa < 2:2949239/93‑1 (MQ=255)
tcacAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATg < 1:2145388/93‑1 (MQ=255)
cacaATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATgg > 2:3358496/1‑93 (MQ=255)
aTTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGctct > 1:452930/1‑93 (MQ=255)
ttGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGa < 1:3839073/93‑1 (MQ=255)
gTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAtt > 2:4308642/1‑93 (MQ=255)
gTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAtt > 2:4152228/1‑93 (MQ=255)
tttACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAttt > 1:4245325/1‑93 (MQ=255)
ttACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTa < 1:4704646/93‑1 (MQ=255)
aCATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAg < 2:2665852/93‑1 (MQ=255)
aCATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAg > 2:3618281/1‑93 (MQ=255)
cATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGt < 2:4723097/93‑1 (MQ=255)
cATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGt < 1:3505602/93‑1 (MQ=255)
cATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGt > 2:156923/1‑93 (MQ=255)
tCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTaa < 2:3044553/93‑1 (MQ=255)
tCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTaa > 1:3441934/1‑93 (MQ=255)
tCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTaa > 1:3005315/1‑93 (MQ=255)
cAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAat < 2:173717/93‑1 (MQ=255)
aaTTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAata < 1:808366/93‑1 (MQ=255)
aTTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAatat < 2:2698351/93‑1 (MQ=255)
tttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCt > 2:655843/1‑93 (MQ=255)
ttAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTg > 1:1204528/1‑93 (MQ=255)
aaCACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCg < 1:1750480/93‑1 (MQ=255)
acacATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAGGTAATATCTGCgg > 2:1190486/1‑93 (MQ=255)
acacATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCgg > 2:4360548/1‑93 (MQ=255)
cacaTCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCggg > 1:3455865/1‑93 (MQ=255)
cacaTCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCggg > 1:3860861/1‑93 (MQ=255)
atcatcAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCggcgtg > 1:2779977/1‑89 (MQ=255)
atcatcAACAATCCGTCTTTATACAGATCGCAAAAATTGACGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGt < 1:2178998/93‑1 (MQ=255)
tcatcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTg < 1:3066438/93‑1 (MQ=255)
tcatcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTg < 1:3066437/93‑1 (MQ=255)
tcatcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTg > 2:3769722/1‑93 (MQ=255)
atcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTggc > 1:3980392/1‑92 (MQ=255)
tcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTc > 2:4702876/1‑93 (MQ=255)
tcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTc > 1:4555028/1‑93 (MQ=255)
tcaACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTc > 2:4039096/1‑93 (MQ=255)
aacaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCAc > 2:1875639/1‑93 (MQ=255)
aacaaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCAc < 2:399786/93‑1 (MQ=255)
aaTCCGTCTTTATACAGATCGCAGAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGtt > 1:2580411/1‑93 (MQ=255)
aaTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGtt < 1:2025506/93‑1 (MQ=255)
aTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGttt > 2:941311/1‑93 (MQ=255)
aTCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGttt > 2:3999500/1‑93 (MQ=255)
ccGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGc < 1:3450421/93‑1 (MQ=255)
ccGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGc < 2:1115689/93‑1 (MQ=255)
cGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCg > 1:3658918/1‑93 (MQ=255)
gTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCgg < 2:2425781/93‑1 (MQ=255)
gTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCgg > 2:1721759/1‑93 (MQ=255)
tttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCggggt < 2:2126318/93‑2 (MQ=255)
tttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGc < 1:4412287/93‑1 (MQ=255)
tttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGc > 1:3040475/1‑93 (MQ=255)
tttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGc < 2:3440700/93‑1 (MQ=255)
tttATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGc < 2:4478534/93‑1 (MQ=255)
tatgCAGAACGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCta < 1:3995326/93‑1 (MQ=255)
ataCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtat > 2:1043555/1‑93 (MQ=255)
taCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata < 1:2671813/93‑1 (MQ=255)
taCAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCtata > 1:858641/1‑93 (MQ=255)
aCAGATCGCAAAGATTGGTGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTatat < 1:4335305/93‑1 (MQ=255)
cAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATg > 2:498403/1‑93 (MQ=255)
gATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTa < 1:3473764/93‑1 (MQ=255)
tCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAcc < 1:1426105/93‑1 (MQ=255)
tCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAcc < 2:1369194/93‑1 (MQ=255)
|
GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACC > NC_000913/2276253‑2276432
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GAAGTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGTT > NC_000913/2276250‑2276436
|
GAAGTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGC > SRR4302544.879126/1‑94 (MQ=60)
GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAA > SRR4302544.4078782/1‑94 (MQ=60)
GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA < SRR4302544.2041135/94‑1 (MQ=60)
GTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAA > SRR4302544.3576950/1‑94 (MQ=60)
TCTCTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAG < SRR4302544.3292834/94‑1 (MQ=60)
TCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAG < SRR4302544.991461/94‑1 (MQ=60)
TCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAG > SRR4302544.3272445/1‑94 (MQ=60)
TCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAG < SRR4302544.737177/94‑1 (MQ=60)
CACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGA > SRR4302544.1895370/1‑94 (MQ=60)
CTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATT > SRR4302544.2665142/1‑94 (MQ=60)
CTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATT > SRR4302544.2481666/1‑94 (MQ=60)
TTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTG < SRR4302544.3809187/94‑1 (MQ=60)
TTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTG > SRR4302544.843652/1‑94 (MQ=60)
ATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAT > SRR4302544.4344353/1‑94 (MQ=60)
ATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTCTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGAT < SRR4302544.4594089/94‑1 (MQ=60)
TTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATG < SRR4302544.242617/94‑1 (MQ=60)
TTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGC < SRR4302544.1122802/94‑1 (MQ=60)
TTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCC < SRR4302544.2375166/94‑1 (MQ=60)
TCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCT < SRR4302544.2290053/94‑1 (MQ=60)
CCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTC < SRR4302544.3062838/94‑1 (MQ=60)
CCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCG < SRR4302544.1321295/94‑1 (MQ=60)
CGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCC > SRR4302544.1553318/1‑94 (MQ=60)
GGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCT > SRR4302544.3307975/1‑94 (MQ=60)
GGAAGCACATTCACTTCACAATTTGTTTACATAAATTTTAACACATCATCAACAATCGGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCT > SRR4302544.1075130/1‑94 (MQ=60)
GAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTG > SRR4302544.160992/1‑94 (MQ=60)
GAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTG > SRR4302544.3015810/1‑94 (MQ=60)
GCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGT < SRR4302544.4513761/94‑1 (MQ=60)
ACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGG > SRR4302544.1255052/1‑94 (MQ=60)
CATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACGGATCGCAAAGATTGATGCCTCGCCTGCGTGGC > SRR4302544.4616771/1‑94 (MQ=60)
CATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGC > SRR4302544.282399/1‑94 (MQ=60)
ATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCC < SRR4302544.1458666/94‑1 (MQ=60)
TTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCT > SRR4302544.112604/1‑94 (MQ=60)
TTCACTTCACAATTTGTTTACAGGAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCT > SRR4302544.849912/1‑94 (MQ=60)
ACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTA < SRR4302544.711601/94‑1 (MQ=60)
ACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTA > SRR4302544.4286489/1‑94 (MQ=60)
CTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTAT > SRR4302544.269021/1‑94 (MQ=60)
TCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGG < SRR4302544.2165839/94‑1 (MQ=60)
ACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCT > SRR4302544.3485572/1‑94 (MQ=60)
ACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCT > SRR4302544.4199659/1‑94 (MQ=60)
AATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCT > SRR4302544.457416/1‑94 (MQ=60)
ATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTG < SRR4302544.2110212/94‑1 (MQ=60)
TTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGAT < SRR4302544.3877148/94‑1 (MQ=60)
TGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATT < SRR4302544.431238/94‑1 (MQ=60)
GTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTT > SRR4302544.4288605/1‑94 (MQ=60)
TTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAA < SRR4302544.4751140/94‑1 (MQ=60)
ACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGT < SRR4302544.4577363/94‑1 (MQ=60)
CATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTA < SRR4302544.3539038/94‑1 (MQ=60)
ATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAA > SRR4302544.3034128/1‑94 (MQ=60)
ATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAA > SRR4302544.3474832/1‑94 (MQ=60)
AATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATAT < SRR4302544.816252/94‑1 (MQ=60)
TTTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCT < SRR4302544.501909/94‑1 (MQ=60)
TTTAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTG > SRR4302544.1216460/1‑94 (MQ=60)
TAACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCG > SRR4302544.1530055/1‑94 (MQ=60)
AACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGG > SRR4302544.2628550/1‑94 (MQ=60)
AACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGG < SRR4302544.2962080/94‑1 (MQ=60)
AACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGG < SRR4302544.1767613/94‑1 (MQ=60)
ACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGG > SRR4302544.3488855/1‑94 (MQ=60)
ACACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGG > SRR4302544.3899193/1‑94 (MQ=60)
ACATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCG > SRR4302544.1445929/1‑94 (MQ=60)
ACATCATCAACAATCCGTCCTTATACAGATCGCAAAGATTGATCCCTCGCCTGCGTGGCCTGTATAGCCCTGATTTAAGTAATATCTGCGGGCG > SRR4302544.1741707/1‑94 (MQ=60)
CATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGC‑GGCGTG > SRR4302544.2806725/1‑94 (MQ=60)
ATCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTG > SRR4302544.4016826/1‑94 (MQ=60)
ATCATCAACAATCCGTCTTTATACAGATCGCAAAAATTGACGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTG < SRR4302544.2199635/94‑1 (MQ=60)
TCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGG < SRR4302544.3095672/94‑1 (MQ=60)
TCATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGG < SRR4302544.3095671/94‑1 (MQ=60)
CATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGC > SRR4302544.4020002/1‑94 (MQ=60)
ATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTC > SRR4302544.3711787/1‑94 (MQ=60)
ATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTC > SRR4302544.4600486/1‑94 (MQ=60)
ATCAACAATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTC > SRR4302544.795118/1‑94 (MQ=60)
CAATCCGTCTTTATACAGATCGCAGAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTT > SRR4302544.2605208/1‑94 (MQ=60)
AATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTT < SRR4302544.2174514/94‑1 (MQ=60)
AATCCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTT < SRR4302544.2045141/94‑1 (MQ=60)
CCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCG < SRR4302544.3483374/94‑1 (MQ=60)
CCGTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCG > SRR4302544.3695421/1‑94 (MQ=60)
GTCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGG < SRR4302544.389899/94‑1 (MQ=60)
TCTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGG < SRR4302544.349939/94‑1 (MQ=60)
CTTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGC > SRR4302544.3069573/1‑94 (MQ=60)
TTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCT < SRR4302544.4356829/94‑1 (MQ=60)
TTTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCT < SRR4302544.4456835/94‑1 (MQ=60)
TTATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTA < SRR4302544.2814413/94‑1 (MQ=60)
TATGCAGAACGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTAT < SRR4302544.4035096/94‑1 (MQ=60)
ATACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATA > SRR4302544.867134/1‑94 (MQ=60)
TACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATAT < SRR4302544.2350365/94‑1 (MQ=60)
TACAGATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATAT < SRR4302544.2697426/94‑1 (MQ=60)
ACAGATCGCAAAGATTGGTGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATG < SRR4302544.4379432/94‑1 (MQ=60)
GATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAC > SRR4302544.4071051/1‑94 (MQ=60)
GATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAC < SRR4302544.3506888/94‑1 (MQ=60)
GATCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTAC < SRR4302544.308431/94‑1 (MQ=60)
TCGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCC < SRR4302544.1440293/94‑1 (MQ=60)
CGCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCG > SRR4302544.4055484/1‑94 (MQ=60)
GCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGT > SRR4302544.3627099/1‑94 (MQ=60)
GCAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGT > SRR4302544.2256527/1‑94 (MQ=60)
CAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGTT < SRR4302544.1310016/94‑1 (MQ=60)
|
GAAGTCACTTATTTTCCCCGGAAGCACATTCACTTCACAATTTGTTTACATCAATTTTAACACATCATCAACAATCCGTCTTTATACAGATCGTAAAGATTGATGCCTCGCCTGCGTGGCCTCTATGGCTCTGATTTAAGTAATATCTGCGGGCGTGGTCACGTTTGCGGGGCTATATGTACCCGTT > NC_000913/2276250‑2276436
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
