Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,284,989 |
(C)5→4 |
coding (1932/2511 nt) |
yejO ← |
putative ATP‑binding component of a transport system |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,284,985 | 0 | C | . | 99.2%
| 586.6
/ ‑3.1
| 130 | coding (1936/2511 nt) | yejO | putative ATP‑binding component of a transport system |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (63/66); total (64/66) |
| Fisher's exact test for biased strand distribution p-value = 4.92e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.78e-01 |
Only 100 of 146 total aligned reads displayed.
ACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > NC_000913/2284893‑2285073
|
aCTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGc > 1:4293424/1‑93 (MQ=255)
cTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcc > 1:719726/1‑93 (MQ=255)
tCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACCTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccc < 1:523845/93‑1 (MQ=255)
aTCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCACCCGGCATAAGcccca > 1:3386344/1‑92 (MQ=255)
aTCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGcccca < 1:325560/93‑2 (MQ=255)
tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAGCCGGCATAAGccccag < 2:748594/93‑3 (MQ=255)
tCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCAACCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATACGcccccg > 2:3862408/1‑92 (MQ=255)
cTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccagg < 1:2041467/93‑4 (MQ=255)
cTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccagg < 1:2103754/93‑4 (MQ=255)
cTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccagg < 2:180951/93‑4 (MQ=255)
ttGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGccccaggg > 1:698479/1‑89 (MQ=255)
tGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGt < 2:3904253/93‑1 (MQ=255)
tGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGt > 1:2938168/1‑93 (MQ=255)
tGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGt < 1:987309/93‑1 (MQ=255)
ccATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGtat < 1:1613623/93‑1 (MQ=255)
cATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGtat > 2:4531524/1‑93 (MQ=255)
cATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGtata < 1:3613752/93‑1 (MQ=255)
cATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGtata > 2:2172470/1‑93 (MQ=255)
atggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAg > 1:857339/1‑93 (MQ=255)
atggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAg > 2:2615584/1‑93 (MQ=255)
atggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAg < 1:665186/93‑1 (MQ=255)
tggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGc < 2:3937727/93‑1 (MQ=255)
tggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCAGCATAAG‑CCCCAGGGTATAGc > 1:4265739/1‑93 (MQ=255)
ggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCt > 1:2759526/1‑93 (MQ=255)
ggatggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGAATAGca > 2:3349150/1‑92 (MQ=255)
atggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTAt > 1:3495770/1‑93 (MQ=255)
ggTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGCATAGCTATCg > 1:2409357/1‑93 (MQ=255)
gtgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGa < 1:33312/93‑1 (MQ=255)
tgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGat < 1:914719/93‑1 (MQ=255)
tgtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGat > 2:2287/1‑93 (MQ=255)
gtTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGata < 1:1497488/93‑1 (MQ=255)
tGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATAtt < 2:1487135/93‑1 (MQ=255)
tGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATAtt > 2:4255307/1‑93 (MQ=255)
ggCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTa < 1:620161/93‑1 (MQ=255)
cAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATTCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATGGATATTAcc < 1:3302556/93‑1 (MQ=255)
aaaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCt < 2:174502/93‑1 (MQ=255)
aaaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCt > 2:2293301/1‑93 (MQ=255)
aaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCtt < 2:1845186/93‑1 (MQ=255)
aaaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCtt > 1:2764880/1‑93 (MQ=255)
aaCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCttt > 1:4026995/1‑93 (MQ=255)
aCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTg > 1:2690533/1‑93 (MQ=255)
aCGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTg > 1:4748211/1‑93 (MQ=255)
cGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgc < 1:4506668/93‑1 (MQ=255)
cgTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgcc < 1:2148988/92‑1 (MQ=255)
gTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTgccg > 1:470925/1‑93 (MQ=255)
aaCTTTCACCACCCCATCAACGTAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGccgccg > 2:2020220/1‑93 (MQ=255)
aCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATGGATATTACCTTTCcccccgg > 1:1348987/1‑92 (MQ=255)
aCTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCcgccgc > 2:4435446/1‑93 (MQ=255)
tCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATc < 1:1560379/93‑1 (MQ=255)
accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa > 1:651590/1‑93 (MQ=255)
accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa < 1:2272337/93‑1 (MQ=255)
accaccCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCaa > 2:3754813/1‑93 (MQ=255)
cccccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAc < 2:3520897/92‑1 (MQ=255)
accCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAc > 1:3858409/1‑93 (MQ=255)
accCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAc > 1:2371032/1‑93 (MQ=255)
cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa > 2:2335294/1‑93 (MQ=255)
cccATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCa < 1:4149339/93‑1 (MQ=255)
ccATCAACACAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCaa < 1:267614/93‑1 (MQ=255)
cATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAat < 2:3234863/93‑1 (MQ=255)
cATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAat > 2:2826362/1‑93 (MQ=255)
tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat > 2:1065687/1‑93 (MQ=255)
tCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAatat > 2:2041436/1‑93 (MQ=255)
cAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATc < 1:3081612/93‑1 (MQ=255)
aaCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCa < 1:757555/93‑1 (MQ=255)
aaCATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCa < 2:4681328/93‑1 (MQ=255)
cATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGa < 1:3703425/93‑1 (MQ=255)
aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa > 2:615644/1‑93 (MQ=255)
aTAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGaa < 1:1643425/93‑1 (MQ=255)
tAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAt > 2:231708/1‑93 (MQ=255)
ggCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATga < 2:2213826/93‑1 (MQ=255)
ggCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATga < 1:2049896/93‑1 (MQ=255)
ggCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATga > 2:170180/1‑93 (MQ=255)
cACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga < 1:110530/93‑1 (MQ=255)
cACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATgaga < 1:1057428/93‑1 (MQ=255)
aCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag < 2:3852323/93‑1 (MQ=255)
aCCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGagag > 2:3246282/1‑93 (MQ=255)
cGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTa < 1:3694008/93‑1 (MQ=255)
cGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTa < 2:4624731/93‑1 (MQ=255)
ttCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc > 1:4227508/1‑93 (MQ=255)
ttCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc < 1:3912152/93‑1 (MQ=255)
ttCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAc > 2:613393/1‑93 (MQ=255)
cTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCa > 1:1339625/1‑93 (MQ=255)
tGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaa > 1:45819/1‑93 (MQ=255)
gATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCaaa < 1:4073240/93‑1 (MQ=255)
tGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGa < 2:350366/93‑1 (MQ=255)
gCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt < 1:1217860/93‑1 (MQ=255)
gCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt < 2:3605444/93‑1 (MQ=255)
gCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGAt < 1:4130350/93‑1 (MQ=255)
cTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATc < 1:1186864/93‑1 (MQ=255)
cccAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCaa < 1:9529/93‑1 (MQ=255)
aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc < 2:956804/93‑1 (MQ=255)
aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc > 2:3824711/1‑93 (MQ=255)
aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc > 2:1124334/1‑93 (MQ=255)
aaCCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGcc < 2:1506515/93‑1 (MQ=255)
ccGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCcgc < 2:4527960/93‑1 (MQ=255)
ggCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGACGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGACGCGa > 2:1753042/1‑93 (MQ=255)
gCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGaa > 2:3379640/1‑93 (MQ=255)
aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt > 1:138392/1‑93 (MQ=255)
aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt > 1:2885908/1‑93 (MQ=255)
aTAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAAtt < 2:2573214/93‑1 (MQ=255)
|
ACTCATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > NC_000913/2284893‑2285073
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGC > NC_000913/2284896‑2285080
|
CATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCACCCGGCATAAGCCCCA > SRR4302544.3418701/1‑94 (MQ=60)
CATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCA > SRR4302544.1441847/1‑94 (MQ=60)
TCTTGCCATGGATGGTGTTGGCAAAACAGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGG < SRR4302544.1603896/94‑1 (MQ=60)
CTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGG > SRR4302544.705436/1‑94 (MQ=60)
CTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGG < SRR4302544.2123995/94‑1 (MQ=60)
CTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGG < SRR4302544.2061166/94‑1 (MQ=60)
TTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGT > SRR4302544.2966384/1‑94 (MQ=60)
TGCCATGGATTGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTATGATGCTCCCAACCGGCATAAG‑CCCCAGGGTA < SRR4302544.950347/94‑1 (MQ=60)
TGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTA < SRR4302544.997001/94‑1 (MQ=60)
GCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTAT > SRR4302544.688018/1‑94 (MQ=60)
CCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATA < SRR4302544.1629532/94‑1 (MQ=60)
CATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAG > SRR4302544.1973149/1‑94 (MQ=60)
CATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAG < SRR4302544.3782143/94‑1 (MQ=60)
CATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAG < SRR4302544.3649248/94‑1 (MQ=60)
CATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAG > SRR4302544.865820/1‑94 (MQ=60)
CATGGATAGTGGTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAG < SRR4302544.3649249/94‑1 (MQ=60)
ATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGC < SRR4302544.671757/94‑1 (MQ=60)
ATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCAGCATAAG‑CCCCAGGGTATAGC > SRR4302544.4309261/1‑94 (MQ=60)
TGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCT > SRR4302544.4691876/1‑94 (MQ=60)
TGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCT > SRR4302544.2786080/1‑94 (MQ=60)
GATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTAT > SRR4302544.3529101/1‑94 (MQ=60)
TGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGCATAGCTATCG > SRR4302544.2432248/1‑94 (MQ=60)
GTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGAT < SRR4302544.33633/94‑1 (MQ=60)
TGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATA < SRR4302544.923757/94‑1 (MQ=60)
GTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATAT < SRR4302544.1512294/94‑1 (MQ=60)
GGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTAC < SRR4302544.4286832/94‑1 (MQ=60)
GGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTAC < SRR4302544.626246/94‑1 (MQ=60)
CAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATTCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATGGATATTACCT < SRR4302544.3334013/94‑1 (MQ=60)
CAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCT > SRR4302544.1353990/1‑94 (MQ=60)
AAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTT > SRR4302544.2791471/1‑94 (MQ=60)
AAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTT > SRR4302544.4067109/1‑94 (MQ=60)
AACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTG > SRR4302544.4794981/1‑94 (MQ=60)
AACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTG > SRR4302544.2716337/1‑94 (MQ=60)
CGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCC < SRR4302544.4551856/94‑1 (MQ=60)
GGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCG > SRR4302544.475528/1‑94 (MQ=60)
CGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCG < SRR4302544.2169451/94‑1 (MQ=60)
AACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATGGATATTACCTTTccccccgg > SRR4302544.1362355/1‑86 (MQ=60)
TCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCA < SRR4302544.1575878/94‑1 (MQ=60)
CACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAA > SRR4302544.2523622/1‑94 (MQ=60)
CACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAA > SRR4302544.658044/1‑94 (MQ=60)
CACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAA < SRR4302544.3337981/94‑1 (MQ=60)
ACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAA < SRR4302544.2293730/94‑1 (MQ=60)
CACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAC > SRR4302544.2393468/1‑94 (MQ=60)
CACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAAC > SRR4302544.3896713/1‑94 (MQ=60)
CCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAA < SRR4302544.4190423/94‑1 (MQ=60)
CCATCAACACAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAAT < SRR4302544.270440/94‑1 (MQ=60)
TCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATC < SRR4302544.4443434/94‑1 (MQ=60)
CAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCA < SRR4302544.3110968/94‑1 (MQ=60)
AACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAG < SRR4302544.764952/94‑1 (MQ=60)
CATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAA < SRR4302544.3740283/94‑1 (MQ=60)
ATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAT > SRR4302544.64289/1‑94 (MQ=60)
ATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAT < SRR4302544.1659629/94‑1 (MQ=60)
ATAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAAT > SRR4302544.1198738/1‑94 (MQ=60)
TAGGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGAATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATG > SRR4302544.4122074/1‑94 (MQ=60)
AGGCATCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCGAAACCAATATCAGAATGA > SRR4302544.2748089/1‑94 (MQ=60)
GGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCGGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAG < SRR4302544.213576/94‑1 (MQ=60)
GGCACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAG < SRR4302544.2069637/94‑1 (MQ=60)
GGCACCGTTCTGATGCGCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAG < SRR4302544.3078077/94‑1 (MQ=60)
CACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAG < SRR4302544.111541/94‑1 (MQ=60)
CACCGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAG < SRR4302544.1067925/94‑1 (MQ=60)
CGTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAA < SRR4302544.3730810/94‑1 (MQ=60)
GTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAC > SRR4302544.4270578/1‑94 (MQ=60)
GTTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAAC < SRR4302544.400017/94‑1 (MQ=60)
TTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACC < SRR4302544.3951015/94‑1 (MQ=60)
TTCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACC > SRR4302544.3442644/1‑94 (MQ=60)
TCTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCA > SRR4302544.1352864/1‑94 (MQ=60)
CTGATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAA > SRR4302544.46276/1‑94 (MQ=60)
GATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAG < SRR4302544.4113776/94‑1 (MQ=60)
ATGCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGA < SRR4302544.2341619/94‑1 (MQ=60)
GCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATC < SRR4302544.4171292/94‑1 (MQ=60)
GCTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATC < SRR4302544.1229911/94‑1 (MQ=60)
CTCCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCA < SRR4302544.1198655/94‑1 (MQ=60)
ctcttccgatcttatatctCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAA < SRR4302544.2203176/75‑1 (MQ=60)
CCCAACCGGCATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAG < SRR4302544.9615/94‑1 (MQ=60)
CATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > SRR4302544.139702/1‑94 (MQ=60)
CATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > SRR4302544.854858/1‑94 (MQ=60)
CATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > SRR4302544.2913738/1‑94 (MQ=60)
CATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATT > SRR4302544.2913739/1‑94 (MQ=60)
ATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTG > SRR4302544.2425898/1‑94 (MQ=60)
ATAAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTG > SRR4302544.547601/1‑94 (MQ=60)
AAG‑CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTA < SRR4302544.2521544/94‑1 (MQ=60)
agCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTAC < SRR4302544.858874/92‑1 (MQ=60)
agCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTAC < SRR4302544.881258/92‑1 (MQ=60)
CCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTG > SRR4302544.373925/1‑94 (MQ=60)
CCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGC > SRR4302544.4053709/1‑94 (MQ=60)
CCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGC > SRR4302544.3861428/1‑94 (MQ=60)
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CATCTTGCCATGGATGGTGTTGGCAAAACGGTCAACTTTCACCACCCCATCAACATAGGCACCGTTCTGATGCTCCCAACCGGCATAAGCCCCCAGGGTATAGCTATCGATATTACCTTTGCCGCCGCGATCAAAACCAATATCAGAATGAGAGTAACCAAAGATCAAGCCGCGAATTGTACTGC > NC_000913/2284896‑2285080
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
