Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,325,759 |
A→G |
G135G (GGT→GGC) |
b2225 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,325,759 | 0 | A | G | 98.6%
| 442.4
/ ‑2.5
| 140 | G135G (GGT→GGC) | b2225 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base G (77/61); total (79/61) |
| Fisher's exact test for biased strand distribution p-value = 5.05e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.98e-01 |
Only 100 of 144 total aligned reads displayed.
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATA > NC_000913/2325669‑2325848
|
gCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGcc > 2:3947933/1‑93 (MQ=255)
ccATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGccc > 1:292234/1‑93 (MQ=255)
ccATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGccc > 1:3328670/1‑93 (MQ=255)
aTCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCgg > 1:1176834/1‑93 (MQ=255)
aTCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCgg > 2:1131007/1‑93 (MQ=255)
gggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGt > 2:1582137/1‑93 (MQ=255)
gggCGTAACAACGTGAAGGTCGAGCTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGt < 1:3717632/93‑1 (MQ=255)
ggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGtt > 2:2432115/1‑93 (MQ=255)
ggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGtt > 1:4311131/1‑93 (MQ=255)
ggaacaccGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAg < 1:3827355/91‑1 (MQ=255)
gTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAg > 2:1332922/1‑93 (MQ=255)
gTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAg > 1:4523009/1‑93 (MQ=255)
gTAACAACGTGAAGGTCGAGGGCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCCCGAATCGTTCCTGTGCCCGGCGTTGAg > 2:3398118/1‑93 (MQ=255)
acaacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTaa < 2:2701796/93‑1 (MQ=255)
caacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTaaa > 2:4621441/1‑93 (MQ=255)
aacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTaaaa > 1:1701566/1‑93 (MQ=255)
aacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTaaaa < 1:905575/93‑1 (MQ=255)
cGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACt > 2:505006/1‑93 (MQ=255)
tGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGc > 1:455468/1‑93 (MQ=255)
aggtcgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAtt > 1:635623/1‑93 (MQ=255)
aggtcgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAtt < 2:726627/93‑1 (MQ=255)
agctcgagctcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAtt < 1:6261/90‑1 (MQ=255)
gtcgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAtttt > 1:587744/1‑93 (MQ=255)
cgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAtttttt > 1:1963190/1‑93 (MQ=255)
gaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTg < 1:1436114/93‑1 (MQ=255)
aggtcgTTATTGTCCGTACCCAACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGt < 2:2111834/93‑1 (MQ=255)
aggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGt < 2:2837362/93‑1 (MQ=255)
ggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTc > 1:2808655/1‑93 (MQ=255)
gctcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTc < 2:3640669/91‑1 (MQ=255)
gtcgGTTTTGCCCGTAACCCAGGAGAAACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCg < 2:1770822/93‑1 (MQ=255)
gtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCg < 2:2934168/93‑1 (MQ=255)
gtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCg < 1:4195950/93‑1 (MQ=255)
gtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCg < 1:4184414/93‑1 (MQ=255)
tcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCgg > 1:3479918/1‑93 (MQ=255)
ggTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCt > 2:1728182/1‑93 (MQ=255)
gTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCtt < 2:311148/93‑1 (MQ=255)
gTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCtt < 1:239867/93‑1 (MQ=255)
aTTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTg < 1:2499415/93‑1 (MQ=255)
aTTGCCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTg < 1:4260552/93‑1 (MQ=255)
ttGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGc > 1:3292232/1‑93 (MQ=255)
tGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGcc > 1:2192227/1‑93 (MQ=255)
tGTCCGTACCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGcc < 2:4513423/93‑1 (MQ=255)
gTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGccc < 2:4010992/93‑1 (MQ=255)
cGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATc < 1:3846693/93‑1 (MQ=255)
tATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCg < 2:2763844/93‑1 (MQ=255)
tCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCggg > 1:860267/1‑93 (MQ=255)
tCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCggg < 1:2817906/93‑1 (MQ=255)
cccACGAGAGAGCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGc < 1:4012399/93‑1 (MQ=255)
cccACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGc < 2:2079044/93‑1 (MQ=255)
ccACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCCTCCGGGCt > 1:1016608/1‑93 (MQ=255)
ccACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCt > 1:1477467/1‑93 (MQ=255)
cACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCtg > 1:4351995/1‑93 (MQ=255)
cACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAAATGCATTTTTTGTCGGCTTTGCCCATCCGGGCtg > 1:1327180/1‑93 (MQ=255)
gagagaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCtgatg > 2:3886884/1‑93 (MQ=255)
ggagaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCtgatga < 2:2888755/92‑1 (MQ=255)
gagaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAc > 1:639546/1‑93 (MQ=255)
agaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAcc > 1:1673829/1‑93 (MQ=255)
agaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAcc < 2:2648286/93‑1 (MQ=255)
agaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAcc > 1:137877/1‑93 (MQ=255)
agaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAcc > 1:2522850/1‑93 (MQ=255)
gaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCt > 1:3914778/1‑93 (MQ=255)
gaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCt > 1:4495278/1‑93 (MQ=255)
gaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCt > 2:498058/1‑93 (MQ=255)
gaACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCt > 2:237998/1‑93 (MQ=255)
aaCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTg > 2:1427628/1‑93 (MQ=255)
cacgcGTAAACGTGCACGAATCGTTCCTGTGCCCGGCATTGAGTAAAACTGCATTATTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCAc < 2:598775/89‑1 (MQ=255)
cAGCCGTAAACGTGCACTAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCAc < 2:1967745/93‑1 (MQ=255)
cAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCAc < 2:1355316/93‑1 (MQ=255)
cAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCAc < 1:3735706/93‑1 (MQ=255)
gCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGc > 2:2349591/1‑93 (MQ=255)
gCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGc < 2:2528603/93‑1 (MQ=255)
gTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGt > 2:4355942/1‑93 (MQ=255)
gTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGt < 2:3026621/93‑1 (MQ=255)
tAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGtt > 1:391536/1‑93 (MQ=255)
tAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGtt < 1:259739/93‑1 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc > 1:1201895/1‑93 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc < 1:1264477/93‑1 (MQ=255)
aaCGTGCACGAATCGTTCCTATGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc > 1:306941/1‑93 (MQ=255)
gTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgctgc > 2:3902613/1‑93 (MQ=255)
gTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgctgc > 1:202602/1‑93 (MQ=255)
gTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACATGCACGCTGTtgctgc > 1:3826565/1‑93 (MQ=255)
tGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGcc > 1:3045695/1‑93 (MQ=255)
tGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGcc < 2:3636720/93‑1 (MQ=255)
cACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCtt < 2:3311769/93‑1 (MQ=255)
cGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCa < 1:4001358/93‑1 (MQ=255)
gAATCGTTCCTGTGCCCGTCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAg < 2:4633189/93‑1 (MQ=255)
gAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAg < 1:2992200/93‑1 (MQ=255)
tCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGa < 2:2882173/93‑1 (MQ=255)
tCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGa < 1:4555318/93‑1 (MQ=255)
cGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGaa < 2:1157671/93‑1 (MQ=255)
ttCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGaaaa > 2:4561865/1‑93 (MQ=255)
ttCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGaaaa < 1:2660161/93‑1 (MQ=255)
gtCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCGTTGCCCATCCGGGCTGAGGACCTGCACGCTGTTGCTGCCTTCAGTGaaaa < 1:2660160/92‑1 (MQ=255)
tCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAat < 2:2575631/93‑1 (MQ=255)
tCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAat < 2:649467/93‑1 (MQ=255)
ccTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAata < 2:3781628/93‑1 (MQ=255)
ccTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAata > 1:1160693/1‑93 (MQ=255)
cTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAatat > 1:143256/1‑93 (MQ=255)
tgtgCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAAtata > 1:543886/1‑93 (MQ=255)
tgtgCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAAtata > 2:596963/1‑93 (MQ=255)
|
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATA > NC_000913/2325669‑2325848
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG > NC_000913/2325666‑2325850
|
TTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTG > SRR4302544.2328016/1‑94 (MQ=60)
TCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGC > SRR4302544.1662000/1‑94 (MQ=60)
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCC > SRR4302544.3360370/1‑94 (MQ=60)
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCC > SRR4302544.295259/1‑94 (MQ=60)
CATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGG > SRR4302544.1188565/1‑94 (MQ=60)
GGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTT > SRR4302544.4355064/1‑94 (MQ=60)
GGGCGTAACAACGTGAAGGTCGAGCTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTT < SRR4302544.3754613/94‑1 (MQ=60)
CGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAG > SRR4302544.4568283/1‑94 (MQ=60)
GGAACACCGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGT < SRR4302544.3865312/94‑1 (MQ=60)
CAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAA > SRR4302544.1718355/1‑94 (MQ=60)
AACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAAC < SRR4302544.914535/94‑1 (MQ=60)
GTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGC > SRR4302544.459965/1‑94 (MQ=60)
AAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATT > SRR4302544.641889/1‑94 (MQ=60)
AGCTCGAGCTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTT < SRR4302544.6320/94‑1 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT < SRR4302544.3791758/94‑1 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT < SRR4302544.2823944/94‑1 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT > SRR4302544.593507/1‑94 (MQ=60)
TCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTT > SRR4302544.1982248/1‑94 (MQ=60)
GAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGT > SRR4302544.2860539/1‑94 (MQ=60)
GAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGT < SRR4302544.3327682/94‑1 (MQ=60)
GAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGT < SRR4302544.1450410/94‑1 (MQ=60)
AGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTC > SRR4302544.2835746/1‑94 (MQ=60)
GGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCG > SRR4302544.2472795/1‑94 (MQ=60)
GGTCGGTATGGTCCGTCTCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCG < SRR4302544.2156614/94‑1 (MQ=60)
GTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGG < SRR4302544.4225852/94‑1 (MQ=60)
GTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGG < SRR4302544.4237627/94‑1 (MQ=60)
GTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGG > SRR4302544.3513098/1‑94 (MQ=60)
GTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTT < SRR4302544.242359/94‑1 (MQ=60)
ATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGC < SRR4302544.2523375/94‑1 (MQ=60)
ATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGC > SRR4302544.3323595/1‑94 (MQ=60)
ATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGGTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGC > SRR4302544.4580238/1‑94 (MQ=60)
ATTGCCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGC < SRR4302544.4304002/94‑1 (MQ=60)
TTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCC > SRR4302544.2212924/1‑94 (MQ=60)
GTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCA > SRR4302544.3969906/1‑94 (MQ=60)
CGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCC < SRR4302544.3884859/94‑1 (MQ=60)
TATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGG > SRR4302544.1318466/1‑94 (MQ=60)
ATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGG > SRR4302544.616728/1‑94 (MQ=60)
ATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGG > SRR4302544.868775/1‑94 (MQ=60)
TCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGC < SRR4302544.2845116/94‑1 (MQ=60)
CCCACGAGAGAGCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCT < SRR4302544.4052314/94‑1 (MQ=60)
CCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCCTCCGGGCT > SRR4302544.1026752/1‑94 (MQ=60)
CCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCT > SRR4302544.1492077/1‑94 (MQ=60)
CCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTG > SRR4302544.4396204/1‑94 (MQ=60)
CCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAAATGCATTTTTTGTCGGCTTTGCCCATCCGGGCTG > SRR4302544.1340232/1‑94 (MQ=60)
CACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGA > SRR4302544.941119/1‑94 (MQ=60)
CACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGA > SRR4302544.1442877/1‑94 (MQ=60)
CGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATG > SRR4302544.2685660/1‑94 (MQ=60)
AGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAC > SRR4302544.645850/1‑94 (MQ=60)
GAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACC > SRR4302544.2547092/1‑94 (MQ=60)
GAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACC > SRR4302544.139180/1‑94 (MQ=60)
GAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACC > SRR4302544.1690318/1‑94 (MQ=60)
AGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCT > SRR4302544.3953667/1‑94 (MQ=60)
AGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCT > SRR4302544.188369/1‑94 (MQ=60)
AGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCT > SRR4302544.4540395/1‑94 (MQ=60)
AACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGC > SRR4302544.3931887/1‑94 (MQ=60)
ACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCC > SRR4302544.4274833/1‑94 (MQ=60)
CAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACG < SRR4302544.3772844/94‑1 (MQ=60)
CCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTG > SRR4302544.4075357/1‑94 (MQ=60)
CGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGT > SRR4302544.844251/1‑94 (MQ=60)
GTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTT > SRR4302544.395507/1‑94 (MQ=60)
GTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTT > SRR4302544.1205212/1‑94 (MQ=60)
TAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTG < SRR4302544.262489/94‑1 (MQ=60)
AAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGC > SRR4302544.1213805/1‑94 (MQ=60)
AAACGTGCACGAATCGTTCCTATGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGC > SRR4302544.310122/1‑94 (MQ=60)
AACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCT > SRR4302544.155699/1‑94 (MQ=60)
AACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCT < SRR4302544.1276917/94‑1 (MQ=60)
CGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGC > SRR4302544.204663/1‑94 (MQ=60)
CGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACATGCACGCTGTTGCTGC > SRR4302544.3864515/1‑94 (MQ=60)
GTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCC > SRR4302544.3074815/1‑94 (MQ=60)
TGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCT < SRR4302544.4767179/94‑1 (MQ=60)
CACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTC > SRR4302544.3059661/1‑94 (MQ=60)
ACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCA > SRR4302544.4434989/1‑94 (MQ=60)
CGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAG < SRR4302544.4041183/94‑1 (MQ=60)
GAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGT < SRR4302544.3020894/94‑1 (MQ=60)
TCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAA < SRR4302544.4600777/94‑1 (MQ=60)
TTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAAT < SRR4302544.2685673/94‑1 (MQ=60)
GTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCGTTGCCCATCCGGGCTGAGGACCTGCACGCTGTTGCTGCCTTCAGTGAAAAT < SRR4302544.2685672/94‑1 (MQ=60)
TCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATA > SRR4302544.1172254/1‑94 (MQ=60)
CCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATAT > SRR4302544.144615/1‑94 (MQ=60)
CCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATAT > SRR4302544.3565411/1‑94 (MQ=60)
CTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATA > SRR4302544.549233/1‑94 (MQ=60)
GTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG > SRR4302544.2928764/1‑94 (MQ=60)
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TTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG > NC_000913/2325666‑2325850
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
