Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,325,759 |
A→G |
G135G (GGT→GGC) |
b2225 ← |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,325,759 | 0 | A | G | 99.6%
| 770.8
/ ‑5.1
| 239 | G135G (GGT→GGC) | b2225 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (107/131); total (108/131) |
| Fisher's exact test for biased strand distribution p-value = 4.52e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.62e-01 |
Only 100 of 252 total aligned reads displayed.
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATA > NC_000913/2325669‑2325848
|
gCCATCGGCCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGcc < 2:2672193/93‑1 (MQ=255)
ccATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGccc < 1:4753887/93‑1 (MQ=255)
ccATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGccc > 1:1322022/1‑93 (MQ=255)
ccATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGccc < 2:4166925/93‑1 (MQ=255)
acagcGGACGAAACAACGTGAGGGTAGAGGTCGGTATTGTCCGTACCGGCAAAGAGAACGACCCGTAAACGTGCACGAATCGTTCCTGTGccc < 2:3516565/89‑1 (MQ=255)
cATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCg < 2:3204793/93‑1 (MQ=255)
aTCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCTCGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCgg < 2:4324802/93‑1 (MQ=255)
tCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGc > 2:51197/1‑93 (MQ=255)
gtgCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGt < 2:2394273/91‑1 (MQ=255)
gggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGt < 2:6639769/93‑1 (MQ=255)
gggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGt > 2:2519020/1‑93 (MQ=255)
ggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGtt < 1:4154263/93‑1 (MQ=255)
ggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGtt > 2:1403623/1‑93 (MQ=255)
ggCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGtt < 2:892402/93‑1 (MQ=255)
cGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGa < 1:2937570/93‑1 (MQ=255)
gTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAg < 2:2906450/93‑1 (MQ=255)
aacaacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTa > 1:1519179/1‑93 (MQ=255)
aacaacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTa > 1:3127012/1‑93 (MQ=255)
aacaacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTa > 2:3366505/1‑93 (MQ=255)
acaacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTaa > 2:876378/1‑93 (MQ=255)
caacGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGACGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTaaa > 1:6623253/1‑93 (MQ=255)
gTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTg > 2:4500452/1‑93 (MQ=255)
gTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTg < 2:1581005/93‑1 (MQ=255)
aggtcgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAtt > 2:5552018/1‑93 (MQ=255)
aggtcgaggtcgGTATTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAtt < 2:6346919/93‑1 (MQ=255)
ggtggaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAttt < 2:1169755/93‑1 (MQ=255)
ggtcgaggtcgGTATTGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAttt < 1:1999474/93‑1 (MQ=255)
ggtcgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAttt < 1:3212922/93‑1 (MQ=255)
tcgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAttttt < 2:822924/93‑1 (MQ=255)
tcgaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCAttttt < 2:4799952/93‑1 (MQ=255)
gaggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTg < 1:999684/93‑1 (MQ=255)
aggtcgGTATTGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGt < 1:6688712/93‑1 (MQ=255)
aggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGt < 1:2443624/93‑1 (MQ=255)
ggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTc < 1:3279352/93‑1 (MQ=255)
ggtcgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTc < 1:208817/93‑1 (MQ=255)
cgtcgCTATTTTCCGTATCCCACGAGAGATCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTc < 1:1176045/92‑1 (MQ=255)
cgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGc < 1:2687100/93‑1 (MQ=255)
cgGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGc < 2:4421420/93‑1 (MQ=255)
gTATTGTCCGTGTCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCtt < 1:3996248/93‑1 (MQ=255)
gTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCtt > 1:4813988/1‑93 (MQ=255)
gTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCtt > 2:152428/1‑93 (MQ=255)
gTATTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCtt < 1:5912343/93‑1 (MQ=255)
tATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCttt < 1:5077529/93‑1 (MQ=255)
aTTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAACACTGCATTTTTTGTCGGCTTTg > 2:5376618/1‑93 (MQ=255)
aTTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTg > 2:5266037/1‑93 (MQ=255)
tGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGcc < 1:4647677/93‑1 (MQ=255)
tGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGcc < 2:2322351/93‑1 (MQ=255)
tCCTTACCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCa < 1:2332916/93‑1 (MQ=255)
ccGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCAt < 1:4570250/93‑1 (MQ=255)
gTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATcc < 2:6605193/93‑1 (MQ=255)
gTATCCCACGAGAGAACCAGCCGTAAACGTGCGCGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATcc < 1:431275/93‑1 (MQ=255)
gTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATcc > 2:3112197/1‑93 (MQ=255)
gTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATcc < 2:1932692/93‑1 (MQ=255)
gTAGCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATcc < 1:172443/93‑1 (MQ=255)
tATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCg < 1:3017878/93‑1 (MQ=255)
aTCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCgg < 1:71290/93‑1 (MQ=255)
tCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCggg > 1:2134874/1‑93 (MQ=255)
cccACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGc < 2:3933480/93‑1 (MQ=255)
ccACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCt > 2:6337777/1‑93 (MQ=255)
cGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCtgat < 2:4845479/93‑1 (MQ=255)
cGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCtgat < 2:4412830/93‑1 (MQ=255)
cGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCtgat < 1:89177/93‑1 (MQ=255)
agaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAcc < 2:2105971/93‑1 (MQ=255)
gaACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCt < 1:4417847/93‑1 (MQ=255)
ccAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCa < 1:4792956/93‑1 (MQ=255)
ccAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCa > 1:5635807/1‑93 (MQ=255)
cAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCAc > 1:2821998/1‑93 (MQ=255)
gcagTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGc < 2:922158/90‑1 (MQ=255)
gCCGTAAACGTGCACGAATCTTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGACTTTGCCCATCCGGGCTGATGACCTGCACga < 1:2750349/93‑2 (MQ=255)
gCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGc > 1:1632492/1‑93 (MQ=255)
cGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTg > 2:3883141/1‑93 (MQ=255)
cGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTg > 2:1988724/1‑93 (MQ=255)
gTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGt < 2:2231354/93‑1 (MQ=255)
gTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGt > 2:6479435/1‑93 (MQ=255)
gTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGt < 1:4294227/93‑1 (MQ=255)
gTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGt < 2:2065189/93‑1 (MQ=255)
aaaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtg > 1:538022/1‑93 (MQ=255)
aaaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtg > 1:2101409/1‑93 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc > 1:4991148/1‑93 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc > 1:1945265/1‑93 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc < 2:2862096/93‑1 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc > 1:6053852/1‑93 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc < 1:6304714/93‑1 (MQ=255)
aaCGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgc < 2:6460055/93‑1 (MQ=255)
cGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgctg > 1:5564831/1‑93 (MQ=255)
cGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTtgctg < 1:6482618/93‑1 (MQ=255)
tGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGcc > 1:1031795/1‑93 (MQ=255)
tGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGcc < 2:3611404/93‑1 (MQ=255)
aCGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTc > 2:2363976/1‑93 (MQ=255)
aCGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTc > 2:6192580/1‑93 (MQ=255)
gAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAg < 2:691144/93‑1 (MQ=255)
gAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAg > 1:1801955/1‑93 (MQ=255)
aaTCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGt > 1:2624058/1‑93 (MQ=255)
aaTCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGt < 2:4631351/93‑1 (MQ=255)
aTCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTg < 1:5283552/93‑1 (MQ=255)
gTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGaaa > 1:3883670/1‑93 (MQ=255)
ttCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGaaaa > 1:3375222/1‑93 (MQ=255)
ttCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGaaaa > 1:5522882/1‑93 (MQ=255)
tCCTGTGCCCGGCGTTAAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAat < 1:3596006/93‑1 (MQ=255)
ccTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAata < 2:598452/93‑1 (MQ=255)
|
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATA > NC_000913/2325669‑2325848
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGGG > NC_000913/2325666‑2325852
|
TTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTG > SRR4302536.3204346/1‑94 (MQ=60)
TTCGCCATCGGGCGGAACAACGTGAAGGTCGAGGTCGGTATTGTCCGCATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTG > SRR4302536.6635140/1‑94 (MQ=60)
CGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCC > SRR4302536.418403/1‑94 (MQ=60)
CGCAATCGGGCGTAACACCGTGAAGGTCGAGGTCGGTATTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCC < SRR4302536.2674645/94‑1 (MQ=60)
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCC > SRR4302536.1361489/1‑94 (MQ=60)
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCC < SRR4302536.1933666/94‑1 (MQ=60)
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCC > SRR4302536.4786309/1‑94 (MQ=60)
GCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCC > SRR4302536.5837410/1‑94 (MQ=60)
CCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCG < SRR4302536.3427146/94‑1 (MQ=60)
CCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCG < SRR4302536.4896994/94‑1 (MQ=60)
CATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGG > SRR4302536.2656544/1‑94 (MQ=60)
GGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTT < SRR4302536.6427120/94‑1 (MQ=60)
GGCGTAACAACGTGAAGGTCGATGTGGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTG < SRR4302536.145062/94‑1 (MQ=60)
GGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTG < SRR4302536.2835109/94‑1 (MQ=60)
GGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTG < SRR4302536.4277558/94‑1 (MQ=60)
GCGAAACAACGGGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGA < SRR4302536.56640/94‑1 (MQ=60)
CGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAG < SRR4302536.1063422/94‑1 (MQ=60)
CGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAG < SRR4302536.3024233/94‑1 (MQ=60)
GTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGACCGGCGCTGAGT > SRR4302536.4942658/1‑94 (MQ=60)
TAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTA > SRR4302536.181366/1‑94 (MQ=60)
TAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTA > SRR4302536.1563900/1‑94 (MQ=60)
TAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTA > SRR4302536.3218404/1‑94 (MQ=60)
AACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAA > SRR4302536.4435956/1‑94 (MQ=60)
ACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGACGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAA > SRR4302536.6820243/1‑94 (MQ=60)
CACCGGGAAGATCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCCGTGCCCGGCGTTGAGTAAAA < SRR4302536.6178723/94‑1 (MQ=60)
CAACGTGAGGTTCGAGCGCGGAATTGTCCGTATCCTAGGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAA < SRR4302536.4349933/94‑1 (MQ=60)
AACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAAC < SRR4302536.6556520/94‑1 (MQ=60)
GGAAGGTCGAGGTGGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCA < SRR4302536.6055617/94‑1 (MQ=60)
AGGGTGGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATT < SRR4302536.3644975/94‑1 (MQ=60)
AAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATT > SRR4302536.3778022/1‑94 (MQ=60)
AAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATT < SRR4302536.3551940/94‑1 (MQ=60)
AAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATT > SRR4302536.5175917/1‑94 (MQ=60)
AAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGCTGAGTAAAACTGCAAT > SRR4302536.4795905/1‑94 (MQ=60)
AGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTT > SRR4302536.5538783/1‑94 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT < SRR4302536.2059645/94‑1 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT < SRR4302536.3307163/94‑1 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT > SRR4302536.4431696/1‑94 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT > SRR4302536.713987/1‑94 (MQ=60)
GGTCGAGGTCGGTATTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTT < SRR4302536.2196410/94‑1 (MQ=60)
CGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTG > SRR4302536.5721020/1‑94 (MQ=60)
CGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTG < SRR4302536.5389562/94‑1 (MQ=60)
GAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGT < SRR4302536.1029181/94‑1 (MQ=60)
GAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGT > SRR4302536.725545/1‑94 (MQ=60)
AGGTCGGTATTGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTC < SRR4302536.6887372/94‑1 (MQ=60)
AGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTC < SRR4302536.2517470/94‑1 (MQ=60)
GGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCG < SRR4302536.214341/94‑1 (MQ=60)
GGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCG < SRR4302536.3375763/94‑1 (MQ=60)
CGTCGCTATTTTCCGTATCCCACGAGAGATCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCG < SRR4302536.1211446/94‑1 (MQ=60)
CGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCT < SRR4302536.2767342/94‑1 (MQ=60)
GGTATTGTCCGTCTCCAGCGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTT < SRR4302536.2035037/94‑1 (MQ=60)
GGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTT > SRR4302536.4958827/1‑94 (MQ=60)
GGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTT < SRR4302536.1283926/94‑1 (MQ=60)
GTATTGTCCGTGTCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTT < SRR4302536.4114839/94‑1 (MQ=60)
GTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTT < SRR4302536.4152217/94‑1 (MQ=60)
GTATTGTCCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTT < SRR4302536.6088448/94‑1 (MQ=60)
TATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTG < SRR4302536.5229498/94‑1 (MQ=60)
ATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGC > SRR4302536.6879228/1‑94 (MQ=60)
TGTCCGTATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCC < SRR4302536.4787411/94‑1 (MQ=60)
GTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCA > SRR4302536.5712968/1‑94 (MQ=60)
TCCTTACCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCAT < SRR4302536.2403706/94‑1 (MQ=60)
CCGTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATC < SRR4302536.4707400/94‑1 (MQ=60)
CGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCC > SRR4302536.4935385/1‑94 (MQ=60)
GTATCCCACGAGAGAACCAGCCGTAAACGTGCGCGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCG < SRR4302536.442621/94‑1 (MQ=60)
GTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCG < SRR4302536.2153438/94‑1 (MQ=60)
GTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCG > SRR4302536.2220664/1‑94 (MQ=60)
GTAGCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCG < SRR4302536.176948/94‑1 (MQ=60)
GTACCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCG < SRR4302536.5792318/94‑1 (MQ=60)
TATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGG < SRR4302536.3106563/94‑1 (MQ=60)
ATCCCACGAGAGACCCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGG < SRR4302536.73225/94‑1 (MQ=60)
ATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTTCCCGGCGTTGAGTAAAACTGCATTTTTTttcgtctttggccttccgac > SRR4302536.6052676/1‑74 (MQ=60)
ATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGG > SRR4302536.6772045/1‑94 (MQ=60)
ATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGG > SRR4302536.2198942/1‑94 (MQ=60)
CCCACGAGAGACCCAGCCGTAAACGTGCACGAAGCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCT < SRR4302536.2693190/94‑1 (MQ=60)
CACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTTCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGA > SRR4302536.6423913/1‑94 (MQ=60)
CGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATG < SRR4302536.91558/94‑1 (MQ=60)
GAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGC > SRR4302536.551111/1‑94 (MQ=60)
AGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGAC > SRR4302536.1331202/1‑94 (MQ=60)
AGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCT < SRR4302536.2738358/94‑1 (MQ=60)
AGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCT > SRR4302536.6205293/1‑94 (MQ=60)
GAACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTG < SRR4302536.4550111/94‑1 (MQ=60)
ACCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCA > SRR4302536.5803229/1‑94 (MQ=60)
CCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCAC > SRR4302536.2905572/1‑94 (MQ=60)
CCAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCAC < SRR4302536.4937228/94‑1 (MQ=60)
CAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACG < SRR4302536.1776837/94‑1 (MQ=60)
CAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACG > SRR4302536.1720917/1‑94 (MQ=60)
CAGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATCTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACG > SRR4302536.33291/1‑94 (MQ=60)
AGCCGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGC > SRR4302536.1680029/1‑94 (MQ=60)
GCCGTAAACGTGCACGAATCTTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGACTTTGCCCATCCGGGCTGATGACCTGCACGAT < SRR4302536.2832241/94‑1 (MQ=60)
CGTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGT > SRR4302536.2081488/1‑94 (MQ=60)
GTAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTT < SRR4302536.4422560/94‑1 (MQ=60)
TAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTG < SRR4302536.3149358/94‑1 (MQ=60)
TAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTG > SRR4302536.551756/1‑94 (MQ=60)
TAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTG > SRR4302536.2776772/1‑94 (MQ=60)
TAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTG > SRR4302536.2164599/1‑94 (MQ=60)
TAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTG > SRR4302536.2425442/1‑94 (MQ=60)
TAAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTG > SRR4302536.4086410/1‑94 (MQ=60)
AAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGC > SRR4302536.2003762/1‑94 (MQ=60)
AAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGC > SRR4302536.5140957/1‑94 (MQ=60)
AAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGC < SRR4302536.2160629/94‑1 (MQ=60)
AAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGC > SRR4302536.6234442/1‑94 (MQ=60)
AAACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGCAAAACTGCATTTTTTGTCGGCTTTGCCCATCCCGGCTGCTGACCTGCACGCTGTTGG > SRR4302536.1865650/1‑94 (MQ=60)
AACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCT < SRR4302536.6492512/94‑1 (MQ=60)
AACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCT > SRR4302536.4606544/1‑94 (MQ=60)
AACGCGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTACT < SRR4302536.3092218/94‑1 (MQ=60)
ACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTG > SRR4302536.5730547/1‑94 (MQ=60)
ACGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGAGCTGATGACCTGCACGCTGTTGCTG < SRR4302536.298959/94‑1 (MQ=60)
CGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGC < SRR4302536.2401932/94‑1 (MQ=60)
CGTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGC < SRR4302536.6675968/94‑1 (MQ=60)
CGTGCACGAATCGTTCCTGTGCCCGGCCTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACCCTGTTGCTGC < SRR4302536.4461968/94‑1 (MQ=60)
GTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGGTGTTGCTGCC > SRR4302536.2768877/1‑94 (MQ=60)
GTGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCC > SRR4302536.1062372/1‑94 (MQ=60)
TGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCT > SRR4302536.4951070/1‑94 (MQ=60)
TGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCT > SRR4302536.816115/1‑94 (MQ=60)
TGCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCT < SRR4302536.3118651/94‑1 (MQ=60)
GCACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTT < SRR4302536.4593466/94‑1 (MQ=60)
ACGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCA < SRR4302536.5195162/94‑1 (MQ=60)
CGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAG > SRR4302536.1608628/1‑94 (MQ=60)
CGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAG > SRR4302536.1856346/1‑94 (MQ=60)
CGAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAG > SRR4302536.680943/1‑94 (MQ=60)
GAATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGT > SRR4302536.2702777/1‑94 (MQ=60)
AATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTG < SRR4302536.804744/94‑1 (MQ=60)
AATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTG > SRR4302536.2964461/1‑94 (MQ=60)
ATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGA > SRR4302536.4961414/1‑94 (MQ=60)
ATCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGA < SRR4302536.5441049/94‑1 (MQ=60)
TCGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAA < SRR4302536.3282046/94‑1 (MQ=60)
CGTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAA > SRR4302536.3999191/1‑94 (MQ=60)
GTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAA > SRR4302536.5687566/1‑94 (MQ=60)
GTTCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAA > SRR4302536.3475507/1‑94 (MQ=60)
TTCCTGTGCACGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAAT < SRR4302536.1673335/94‑1 (MQ=60)
TCCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATA > SRR4302536.2045287/1‑94 (MQ=60)
TCCTGTGCCCGGCGTTAAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATA < SRR4302536.3703549/94‑1 (MQ=60)
CCTGTGCCGGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATAT < SRR4302536.3712115/94‑1 (MQ=60)
CCTGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATAT > SRR4302536.4816570/1‑94 (MQ=60)
TGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAA < SRR4302536.3325578/94‑1 (MQ=60)
TGTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAA < SRR4302536.940181/94‑1 (MQ=60)
GTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG < SRR4302536.3532958/94‑1 (MQ=60)
GTGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAG < SRR4302536.1543162/94‑1 (MQ=60)
TGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGG < SRR4302536.4066500/94‑1 (MQ=60)
TGCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGG < SRR4302536.1936221/94‑1 (MQ=60)
GCCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGGG < SRR4302536.6187965/94‑1 (MQ=60)
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TTCGCCATCGGGCGTAACAACGTGAAGGTCGAGGTCGGTATTGTCCGTATCCCACGAGAGAACCAGCCGTAAACGTGCACGAATCGTTCCTGTACCCGGCGTTGAGTAAAACTGCATTTTTTGTCGGCTTTGCCCATCCGGGCTGATGACCTGCACGCTGTTGCTGCCTTCAGTGAAAATATAAGGG > NC_000913/2325666‑2325852
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
