Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,343,154 |
T→C |
R90R (CGT→CGC) |
nrdA → |
ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,343,154 | 0 | T | C | 98.7%
| 473.3
/ ‑5.0
| 150 | R90R (CGT→CGC) | nrdA | ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base C (76/71); minor base A (1/1); total (77/73) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 159 total aligned reads displayed.
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT > NC_000913/2343064‑2343243
|
aaCCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaa > 1:482551/1‑93 (MQ=255)
aCCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaa > 2:3514307/1‑93 (MQ=255)
cATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGCTCTTCCACCTGCGCaaaaa > 1:1769688/1‑93 (MQ=255)
aTTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaaaaa < 2:1899340/93‑1 (MQ=255)
aTTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCaaaaaa < 1:4139239/93‑1 (MQ=255)
aTTATCAAGGATGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCcaaaaa > 2:1583535/1‑93 (MQ=255)
tATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGc < 2:2165270/93‑1 (MQ=255)
aTCAGGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGcc < 1:1121007/93‑1 (MQ=255)
aTCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGcc < 2:3653431/93‑1 (MQ=255)
tCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCt > 1:125477/1‑93 (MQ=255)
tCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCt < 1:2223998/93‑1 (MQ=255)
cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTa < 1:1130427/93‑1 (MQ=255)
aaGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAc > 1:181457/1‑93 (MQ=255)
gCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGc > 2:627624/1‑93 (MQ=255)
gCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGc > 2:1963243/1‑93 (MQ=255)
cTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGcc < 2:3584844/93‑1 (MQ=255)
cTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGcc > 1:2555025/1‑93 (MQ=255)
tGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCa > 2:4192584/1‑93 (MQ=255)
cGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGtt > 1:1074945/1‑93 (MQ=255)
cGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGtt < 2:893219/93‑1 (MQ=255)
gCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGttt < 2:3754699/93‑1 (MQ=255)
gCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGttt < 1:2295533/93‑1 (MQ=255)
aGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGa < 2:2821516/93‑1 (MQ=255)
aGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGa < 1:3650544/93‑1 (MQ=255)
aCCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgc < 1:14207/93‑1 (MQ=255)
aCCTGACCTCCCGTGACGCGCCGGATTATCACTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGAAAAAAAGCCTACGGCCAGTTTGAgc < 2:4304666/93‑1 (MQ=255)
ccTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgcc > 1:4542869/1‑93 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccgc > 1:532331/1‑93 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccgc > 2:4131639/1‑93 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAgccgc < 2:4605435/93‑1 (MQ=255)
aTCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCt < 1:4190016/93‑1 (MQ=255)
tctcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTg < 2:1602289/93‑1 (MQ=255)
ctcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgc < 1:3585437/93‑1 (MQ=255)
tcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcg > 2:3014619/1‑93 (MQ=255)
tcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcg > 2:2539225/1‑93 (MQ=255)
ccggTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcgc < 1:453196/90‑1 (MQ=255)
cccGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcgc < 1:3373515/93‑1 (MQ=255)
cccGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcgc < 2:1700231/93‑1 (MQ=255)
ccGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCt < 2:1451652/93‑1 (MQ=255)
ccGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGACGCCTGCGCt > 2:177329/1‑93 (MQ=255)
gATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCATACGGCCAGTCTGAGCCGCCTGCGCTGTAc > 1:3403154/1‑93 (MQ=255)
tGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCCGCGCTGTACGa > 1:2871386/1‑93 (MQ=255)
gcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCa > 1:2475305/1‑93 (MQ=255)
ggATTATCCGTACCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgt < 2:3430693/93‑1 (MQ=255)
aTTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtgg < 2:2702463/93‑1 (MQ=255)
aTTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtgg < 1:2160849/93‑1 (MQ=255)
ttATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtggt < 1:2296507/93‑1 (MQ=255)
ttATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtggt < 2:1760750/93‑1 (MQ=255)
ttATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtggt < 1:247316/93‑1 (MQ=255)
tATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtggtg < 2:673056/93‑1 (MQ=255)
tATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtggtg < 1:1800888/93‑1 (MQ=255)
cAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGaaa < 1:4398240/93‑1 (MQ=255)
tATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAGAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCCCGTGGTGAAAATg > 1:629290/1‑93 (MQ=255)
tATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATg < 1:2624003/93‑1 (MQ=255)
tATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATg > 1:629291/1‑93 (MQ=255)
tATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATg > 2:747198/1‑93 (MQ=255)
tctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt < 2:2870078/93‑1 (MQ=255)
ctcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGTCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTc < 2:2958423/93‑1 (MQ=255)
tcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCg > 1:2033753/1‑93 (MQ=255)
tcGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCg > 2:4467382/1‑93 (MQ=255)
cgccgcGCGCCTGGCGATCTTCCACCTGCTCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCga < 1:189975/93‑1 (MQ=255)
ctgcgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgaga < 2:2387754/91‑1 (MQ=255)
cgcgcgCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAt < 2:4383224/93‑1 (MQ=255)
gcgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATg < 2:1365306/93‑1 (MQ=255)
gcgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATg < 2:3243191/93‑1 (MQ=255)
gcgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATg > 1:3840194/1‑93 (MQ=255)
ccgcgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATg < 1:54849/92‑1 (MQ=255)
cgcCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGc < 2:1202805/93‑1 (MQ=255)
ccTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCaa > 1:3513433/1‑93 (MQ=255)
ccTGGCGAGCTTCCACCTGCGCAAAAAAGCCTAC‑GCCAGGTTTAACCGCCCGCGCCGGTCCACCCCGGGGCGGAAATGGTCGAGATGGGCaaa > 2:1645964/1‑93 (MQ=255)
cTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGAGCGAGATGGGCaaa > 2:4176804/1‑93 (MQ=255)
cTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTGTGAGCCGCCTGCGCTGTACGACCGCGTGGTGAAAATGGTCGAGATGGGCaaa < 1:2915353/93‑1 (MQ=255)
tGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAt > 1:2927534/1‑93 (MQ=255)
ggCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa < 2:2286705/93‑1 (MQ=255)
ggCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa > 2:4510128/1‑93 (MQ=255)
cGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATaag < 2:1151344/93‑3 (MQ=255)
cGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACg < 1:4497468/93‑1 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCACATACGa > 1:1018957/1‑93 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa > 1:94632/1‑93 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa > 2:2038213/1‑93 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa > 1:160347/1‑93 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa > 1:4365995/1‑93 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa > 1:94633/1‑93 (MQ=255)
gATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa < 1:4454013/93‑1 (MQ=255)
aTCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAt > 1:2523376/1‑93 (MQ=255)
aTCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAt > 1:788155/1‑93 (MQ=255)
tCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATa > 1:3554215/1‑93 (MQ=255)
tCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATa > 1:4154060/1‑93 (MQ=255)
ttCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat > 1:3891/1‑93 (MQ=255)
ttCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat < 1:2717436/93‑1 (MQ=255)
tCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatc > 2:2503103/1‑93 (MQ=255)
cccTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcatc < 2:1014420/92‑1 (MQ=255)
aCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcatc > 2:414455/1‑93 (MQ=255)
aCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcatc > 2:4731036/1‑93 (MQ=255)
aCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGATCGAGATGGGCAAATACGATAatcatc < 2:3948894/93‑1 (MQ=255)
aCCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGGGAAAATGGTCGAGATGGGCAAATACGATAatcatc > 2:4002509/1‑93 (MQ=255)
ccTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATct < 1:2413041/93‑1 (MQ=255)
tGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgc > 1:4271578/1‑93 (MQ=255)
cgcgcAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgc < 1:3620015/92‑1 (MQ=255)
cgcgcAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgc < 2:3347464/92‑1 (MQ=255)
|
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT > NC_000913/2343064‑2343243
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
AAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > NC_000913/2343063‑2343247
|
AAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAA > SRR4302544.487276/1‑94 (MQ=60)
ACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCACCTGGCGATCTTCCACCTGCGCAAAA > SRR4302544.1597732/1‑94 (MQ=60)
CCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGCTCTTCCACCTGCGCAAAAA > SRR4302544.1787008/1‑94 (MQ=60)
ATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAG < SRR4302544.4180224/94‑1 (MQ=60)
ATCAGGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCT < SRR4302544.1132185/94‑1 (MQ=60)
ATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCT > SRR4302544.126633/1‑94 (MQ=60)
ATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCT < SRR4302544.3148302/94‑1 (MQ=60)
ATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCT < SRR4302544.2830295/94‑1 (MQ=60)
TCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTA < SRR4302544.2244922/94‑1 (MQ=60)
CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC > SRR4302544.183252/1‑94 (MQ=60)
CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC < SRR4302544.1141690/94‑1 (MQ=60)
CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTAC > SRR4302544.183251/1‑94 (MQ=60)
AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACG > SRR4302544.204182/1‑94 (MQ=60)
AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACG < SRR4302544.668372/94‑1 (MQ=60)
GCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCC > SRR4302544.2579556/1‑94 (MQ=60)
CTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGCTCTTCCACCTGCGCAAAAACGCCTACGGCCA > SRR4302544.591710/1‑94 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTT > SRR4302544.1085634/1‑94 (MQ=60)
GCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTG < SRR4302544.2317175/94‑1 (MQ=60)
GCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTG < SRR4302544.2317176/94‑1 (MQ=60)
AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAG < SRR4302544.3686970/94‑1 (MQ=60)
AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAG > SRR4302544.4194045/1‑94 (MQ=60)
ACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCC < SRR4302544.14342/94‑1 (MQ=60)
ACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCC > SRR4302544.4588261/1‑94 (MQ=60)
ACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAACCCTACGGCCAGGTTGAGCC > SRR4302544.2504515/1‑94 (MQ=60)
CTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGC > SRR4302544.537608/1‑94 (MQ=60)
CTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGC > SRR4302544.2468312/1‑94 (MQ=60)
TGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCC > SRR4302544.2084870/1‑94 (MQ=60)
ATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTG < SRR4302544.4231520/94‑1 (MQ=60)
ATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTG < SRR4302544.3482124/94‑1 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG > SRR4302544.3553032/1‑94 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG < SRR4302544.3619849/94‑1 (MQ=60)
CCGGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCT < SRR4302544.457684/94‑1 (MQ=60)
CCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCT < SRR4302544.3405723/94‑1 (MQ=60)
GTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTA > SRR4302544.2364598/1‑94 (MQ=60)
TGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCATACGGCCAGTCTGAGCCGCCTGCGCTGTAC > SRR4302544.3435692/1‑94 (MQ=60)
ATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCCGCGCTGTACGA > SRR4302544.2899102/1‑94 (MQ=60)
GCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTACGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACC < SRR4302544.4290566/94‑1 (MQ=60)
CGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCA > SRR4302544.2498974/1‑94 (MQ=60)
ATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGT > SRR4302544.4464751/1‑94 (MQ=60)
ATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGT < SRR4302544.2181370/94‑1 (MQ=60)
TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTG > SRR4302544.1629553/1‑94 (MQ=60)
TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTG < SRR4302544.249907/94‑1 (MQ=60)
TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTG < SRR4302544.2318167/94‑1 (MQ=60)
TATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGA < SRR4302544.1818486/94‑1 (MQ=60)
ATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAA > SRR4302544.1129862/1‑94 (MQ=60)
CAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAA < SRR4302544.4442701/94‑1 (MQ=60)
GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAGAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCCCGTGGTGAAAATG > SRR4302544.635481/1‑94 (MQ=60)
GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG > SRR4302544.635482/1‑94 (MQ=60)
TATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGG < SRR4302544.2649163/94‑1 (MQ=60)
TATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGG < SRR4302544.2649162/94‑1 (MQ=60)
ATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGT > SRR4302544.4344744/1‑94 (MQ=60)
ACTCGCCGCGCGCCTGGTCATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGACTGCGCTGTACGACCACGTGGTGAAAATGGTC < SRR4302544.4742668/94‑1 (MQ=60)
CTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCG > SRR4302544.2053422/1‑94 (MQ=60)
CGCCGCGCGCCTGGCGATCTTCCACCTGCTCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAG < SRR4302544.191872/94‑1 (MQ=60)
CGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAG < SRR4302544.839146/94‑1 (MQ=60)
CGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATG > SRR4302544.3878291/1‑94 (MQ=60)
CGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAGGGTCGAGATG > SRR4302544.3878290/1‑94 (MQ=60)
CCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGG < SRR4302544.55403/94‑1 (MQ=60)
CGCGCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG > SRR4302544.2933039/1‑94 (MQ=60)
GCCTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAA > SRR4302544.3546959/1‑94 (MQ=60)
CTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAT > SRR4302544.2955671/1‑94 (MQ=60)
CTGGCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTGTGAGCCGCCTGCGCTGTACGACCGCGTGGTGAAAATGGTCGAGATGGGCAAAT < SRR4302544.2943386/94‑1 (MQ=60)
GCGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACG > SRR4302544.532059/1‑94 (MQ=60)
CGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCACATACGA > SRR4302544.1029132/1‑94 (MQ=60)
CGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGA > SRR4302544.95506/1‑94 (MQ=60)
CGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGA > SRR4302544.95507/1‑94 (MQ=60)
CGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGA < SRR4302544.4542605/94‑1 (MQ=60)
CGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGA > SRR4302544.4410277/1‑94 (MQ=60)
CGATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGA > SRR4302544.161913/1‑94 (MQ=60)
GATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT > SRR4302544.795779/1‑94 (MQ=60)
GATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT < SRR4302544.4498877/94‑1 (MQ=60)
GATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT > SRR4302544.2547623/1‑94 (MQ=60)
ATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATA > SRR4302544.4195203/1‑94 (MQ=60)
ATCTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATA > SRR4302544.3588266/1‑94 (MQ=60)
CTTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAAT > SRR4302544.3923/1‑94 (MQ=60)
TTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATC < SRR4302544.2743589/94‑1 (MQ=60)
CTCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATC < SRR4302544.1155319/94‑1 (MQ=60)
TCCACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCA < SRR4302544.4557368/94‑1 (MQ=60)
ACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCT < SRR4302544.3912443/94‑1 (MQ=60)
ACCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCGGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCT < SRR4302544.3636714/94‑1 (MQ=60)
CCTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTG < SRR4302544.2435991/94‑1 (MQ=60)
CTGCGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGC > SRR4302544.4315181/1‑94 (MQ=60)
CGCAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGG > SRR4302544.2469646/1‑94 (MQ=60)
CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > SRR4302544.1850534/1‑94 (MQ=60)
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AAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGTAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > NC_000913/2343063‑2343247
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
