Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,343,154 |
T→C |
R90R (CGT→CGC) |
nrdA → |
ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,343,154 | 0 | T | C | 99.2%
| 761.4
/ ‑2.4
| 239 | R90R (CGT→CGC) | nrdA | ribonucleoside diphosphate reductase 1 alpha subunit, B1 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (106/131); minor base A (0/2); total (106/133) |
| Fisher's exact test for biased strand distribution p-value = 5.04e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.39e-01 |
Only 100 of 245 total aligned reads displayed.
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑TAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT > NC_000913/2343064‑2343243
|
aaCCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑Caa > 2:6331245/1‑93 (MQ=255)
aaCCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑Caa > 2:4846569/1‑93 (MQ=255)
ccATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGACTGGCGATCTTCTATCTCCG‑Caaaa > 1:5628006/1‑93 (MQ=255)
cATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑Caaaaa > 2:5862536/1‑93 (MQ=255)
cATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑Caaaaa > 2:4936756/1‑93 (MQ=255)
aTTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑Caaaaaa < 2:2743464/93‑1 (MQ=255)
aTTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑Caaaaaa < 2:1613072/93‑1 (MQ=255)
tATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGc < 2:4825826/93‑1 (MQ=255)
aTCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGcc > 2:6729813/1‑93 (MQ=255)
aTCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGcc < 2:547172/93‑1 (MQ=255)
cAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATATCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTa > 2:572663/1‑93 (MQ=255)
aaGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTAc > 2:1401222/1‑93 (MQ=255)
aaGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTAc < 2:3236801/93‑1 (MQ=255)
aGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCGCAAAAAAAGCCTAc < 2:612307/93‑1 (MQ=255)
aGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACg < 2:766647/93‑1 (MQ=255)
gCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCGCCTGCG‑CAAAAAAGCCTACGGc < 1:5699278/93‑1 (MQ=255)
gCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAg > 1:1290920/1‑93 (MQ=255)
gCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAg > 1:552857/1‑93 (MQ=255)
ccGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGt < 1:1119257/93‑1 (MQ=255)
cGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGtt < 2:4052930/93‑1 (MQ=255)
cGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGtt > 1:4348561/1‑93 (MQ=255)
cGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGtt < 2:3067249/93‑1 (MQ=255)
cGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGtt > 1:5286559/1‑93 (MQ=255)
aGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGa < 2:5820494/93‑1 (MQ=255)
aGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGa > 2:109736/1‑93 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAGAAAAGCCTACGGCCAGTTTGAg > 1:3193612/1‑93 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAg > 2:4645153/1‑93 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAg > 1:5572607/1‑93 (MQ=255)
gACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAg > 2:1335535/1‑93 (MQ=255)
aCCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgc < 1:4966060/93‑1 (MQ=255)
aCCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGACTACGGCCAGTTTGAgc > 1:6089398/1‑93 (MQ=255)
ccTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgcc < 1:3208735/93‑1 (MQ=255)
ccTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgcc < 2:1825586/93‑1 (MQ=255)
cTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgccg > 1:1019600/1‑93 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgccgc > 2:2236059/1‑93 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgccgc > 2:3730213/1‑93 (MQ=255)
tGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgccgc > 2:2327348/1‑93 (MQ=255)
gATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAgccgcc < 1:4510654/93‑1 (MQ=255)
aTCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCt < 1:3746169/93‑1 (MQ=255)
ctcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgc > 2:2082878/1‑93 (MQ=255)
tcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcg > 1:1778544/1‑93 (MQ=255)
tcCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTgcg > 1:5073872/1‑93 (MQ=255)
gTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGt < 2:1271187/93‑1 (MQ=255)
tGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTa < 1:6039782/93‑1 (MQ=255)
gATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAc > 2:2011894/1‑93 (MQ=255)
gcgcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGAc > 1:4387066/1‑93 (MQ=255)
gcgcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGAc < 2:3459450/93‑1 (MQ=255)
gcCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCa < 1:1266691/93‑1 (MQ=255)
ccGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAc > 2:6616775/1‑93 (MQ=255)
ggATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgt < 2:3164640/93‑1 (MQ=255)
ggATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgg > 2:3119929/1‑92 (MQ=255)
aTTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtgg < 2:2924888/93‑1 (MQ=255)
aTTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtgg < 1:3004778/93‑1 (MQ=255)
aTTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACgtgg > 2:3772109/1‑93 (MQ=255)
ttATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCTCCTGCGCTGTACGACCACgtggt < 1:5374403/93‑1 (MQ=255)
aTCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGGTTGAGCCGCCTGCGCTGTACGACCACGTGGTGa > 1:1162382/1‑93 (MQ=255)
tCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGaa < 2:4512777/93‑1 (MQ=255)
gTATCTCGCCGCGCGCCTGGCTATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt < 1:6276585/93‑1 (MQ=255)
gTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAAt < 1:2002063/93‑1 (MQ=255)
tATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATg < 1:1500729/93‑1 (MQ=255)
tgctcGCCGCGCGCCTGTCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATgg < 1:938511/91‑1 (MQ=255)
aTCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATgg > 1:2270359/1‑93 (MQ=255)
aTCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATgg < 1:6656079/93‑1 (MQ=255)
tctcGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt < 2:5565746/93‑1 (MQ=255)
tctcGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGt < 2:5057481/93‑1 (MQ=255)
ctcGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGCTc < 1:4079159/93‑1 (MQ=255)
cgccgcGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCga < 1:2011352/93‑1 (MQ=255)
gccgcGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCgag < 1:2525601/93‑1 (MQ=255)
cgcgcCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATgg > 2:5947371/1‑93 (MQ=255)
cgcCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGc < 2:5678808/93‑1 (MQ=255)
cTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCaaa > 2:533189/1‑93 (MQ=255)
tGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAt > 1:5937381/1‑93 (MQ=255)
ggCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa < 1:6006026/93‑1 (MQ=255)
ggCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa > 2:5361057/1‑93 (MQ=255)
gccGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATa < 1:4242107/91‑1 (MQ=255)
gCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCTCGTGGTGAAAATGGTCGAGATGGGCAAATAc < 1:2396483/93‑1 (MQ=255)
gCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAc < 1:5895180/93‑1 (MQ=255)
cGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACg > 1:4897028/1‑93 (MQ=255)
gATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa < 1:3652284/93‑1 (MQ=255)
gATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa < 1:3425032/93‑1 (MQ=255)
gATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGa < 2:1518653/93‑1 (MQ=255)
aTCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAt > 2:4413876/1‑93 (MQ=255)
tCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGGTa > 1:2014863/1‑93 (MQ=255)
cTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATaa < 1:6338888/93‑1 (MQ=255)
cTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATaa < 1:1649953/93‑1 (MQ=255)
ttCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat < 2:2513544/93‑1 (MQ=255)
ttCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat < 1:4621725/93‑1 (MQ=255)
ttCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAat < 2:6300552/93‑1 (MQ=255)
tCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatc < 2:3540739/93‑1 (MQ=255)
ccACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatca < 1:1827450/93‑1 (MQ=255)
ccACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatca > 2:6490398/1‑93 (MQ=255)
ccACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGAGCAAATACGATAatca > 1:283585/1‑93 (MQ=255)
cACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcat > 2:590232/1‑93 (MQ=255)
aCCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcatc < 1:3107627/93‑1 (MQ=255)
aCCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAatcatc < 2:4342604/93‑1 (MQ=255)
ccTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATct > 2:5252313/1‑93 (MQ=255)
ccTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATct < 2:4976070/93‑1 (MQ=255)
cTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctg > 2:1662475/1‑93 (MQ=255)
tGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgc < 1:6588618/93‑1 (MQ=255)
gcg‑cAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATctgct < 2:6044254/93‑1 (MQ=255)
|
AACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑TAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT > NC_000913/2343064‑2343243
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑TAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > NC_000913/2343061‑2343247
|
CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑C < SRR4302536.6433550/94‑1 (MQ=60)
AAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAA > SRR4302536.1456840/1‑94 (MQ=60)
ACCATTATCAAGGCTGCCGCAGATCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAA < SRR4302536.4465793/94‑1 (MQ=60)
CCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAA < SRR4302536.5850280/94‑1 (MQ=60)
TATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCC < SRR4302536.6227371/94‑1 (MQ=60)
TCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTA > SRR4302536.4530341/1‑94 (MQ=60)
TCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCATA > SRR4302536.1273757/1‑94 (MQ=60)
CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTAC > SRR4302536.5356385/1‑94 (MQ=60)
CAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTAC > SRR4302536.6827435/1‑94 (MQ=60)
AAGGCTGCCGCAGAGCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCGGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACG < SRR4302536.5646473/94‑1 (MQ=60)
AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACG > SRR4302536.6194666/1‑94 (MQ=60)
AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACG > SRR4302536.5119370/1‑94 (MQ=60)
AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACG > SRR4302536.1328117/1‑94 (MQ=60)
AAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACG > SRR4302536.549390/1‑94 (MQ=60)
GCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCGCCTGCG‑CAAAAAAGCCTACGGCC < SRR4302536.5868739/94‑1 (MQ=60)
TGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAACAAGCCTACGGCCAG > SRR4302536.1379727/1‑94 (MQ=60)
TGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAG > SRR4302536.566948/1‑94 (MQ=60)
TGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAG > SRR4302536.1329517/1‑94 (MQ=60)
GCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGT < SRR4302536.4161139/94‑1 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTT < SRR4302536.1152860/94‑1 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTT > SRR4302536.5444166/1‑94 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTT > SRR4302536.4478700/1‑94 (MQ=60)
CCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGCCCGGTT > SRR4302536.3281689/1‑94 (MQ=60)
CGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTT < SRR4302536.2333021/94‑1 (MQ=60)
GCAGACCTGATCTCCCGTGATGCGCGGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTG < SRR4302536.6356951/94‑1 (MQ=60)
GCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTG > SRR4302536.576397/1‑94 (MQ=60)
GCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCAGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTG < SRR4302536.5628287/94‑1 (MQ=60)
CAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGA < SRR4302536.3246350/94‑1 (MQ=60)
CAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGA < SRR4302536.611110/94‑1 (MQ=60)
AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAGAAAAGCCTACGGCCAGTTTGAG > SRR4302536.3287239/1‑94 (MQ=60)
AGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAG > SRR4302536.5738502/1‑94 (MQ=60)
GACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGACTACGGCCAGTTTGAGC > SRR4302536.6270996/1‑94 (MQ=60)
ACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCC < SRR4302536.5115244/94‑1 (MQ=60)
ACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCC < SRR4302536.4425656/94‑1 (MQ=60)
ACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCC > SRR4302536.4986713/1‑94 (MQ=60)
CCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCG > SRR4302536.1049777/1‑94 (MQ=60)
CCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCG < SRR4302536.3302872/94‑1 (MQ=60)
CCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCG > SRR4302536.2646613/1‑94 (MQ=60)
CTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGC < SRR4302536.591958/94‑1 (MQ=60)
CTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGC > SRR4302536.2072743/1‑94 (MQ=60)
GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCT < SRR4302536.4645957/94‑1 (MQ=60)
GATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCT < SRR4302536.123640/94‑1 (MQ=60)
ATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTG > SRR4302536.1990886/1‑94 (MQ=60)
ATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTG < SRR4302536.3858153/94‑1 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG > SRR4302536.5225762/1‑94 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG > SRR4302536.1719591/1‑94 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG > SRR4302536.1832328/1‑94 (MQ=60)
CTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCG < SRR4302536.6780526/94‑1 (MQ=60)
CCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCT < SRR4302536.4169231/94‑1 (MQ=60)
CCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTG > SRR4302536.924039/1‑94 (MQ=60)
GTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTA < SRR4302536.3825032/94‑1 (MQ=60)
TGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTAC < SRR4302536.6219910/94‑1 (MQ=60)
GATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACG < SRR4302536.3060506/94‑1 (MQ=60)
TGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGAC > SRR4302536.4518089/1‑94 (MQ=60)
CGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCA > SRR4302536.1608573/1‑94 (MQ=60)
GCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC > SRR4302536.306613/1‑94 (MQ=60)
GCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC < SRR4302536.2536360/94‑1 (MQ=60)
GCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCAC < SRR4302536.1304657/94‑1 (MQ=60)
CGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGT < SRR4302536.4720436/94‑1 (MQ=60)
GGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTG > SRR4302536.568866/1‑94 (MQ=60)
ATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGT < SRR4302536.5434474/94‑1 (MQ=60)
ATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGT < SRR4302536.3093135/94‑1 (MQ=60)
TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCTCCTGCGCTGTACGACCACGTGGTG < SRR4302536.5534743/94‑1 (MQ=60)
TTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTG < SRR4302536.4610725/94‑1 (MQ=60)
TATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGGTTGAGCCGCCTGCGCTGTACGACCACGTGGTGA > SRR4302536.1197371/1‑94 (MQ=60)
GTATCTCGCCGCGCGCCTGGCTATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG < SRR4302536.6463607/94‑1 (MQ=60)
GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG < SRR4302536.2062313/94‑1 (MQ=60)
GTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATG < SRR4302536.1895241/94‑1 (MQ=60)
TATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGG < SRR4302536.1544998/94‑1 (MQ=60)
TATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGG > SRR4302536.2339130/1‑94 (MQ=60)
TATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGG < SRR4302536.1813982/94‑1 (MQ=60)
tgCTCGCCGCGCGCCTGTCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGT < SRR4302536.966181/92‑1 (MQ=60)
ATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGT < SRR4302536.6853903/94‑1 (MQ=60)
TCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAATAAAGCCTACGGCGAGTTTGACCCGCCTGCGCTGTAGGACCACGTGGTGAAAATGGTC < SRR4302536.3392185/94‑1 (MQ=60)
TCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTC < SRR4302536.3481149/94‑1 (MQ=60)
TCCCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTC < SRR4302536.4254943/94‑1 (MQ=60)
CTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGCTCG < SRR4302536.4200065/94‑1 (MQ=60)
CGCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAG < SRR4302536.2071879/94‑1 (MQ=60)
GCCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGA < SRR4302536.2601741/94‑1 (MQ=60)
CCGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGAG > SRR4302536.5780478/1‑94 (MQ=60)
CGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATG < SRR4302536.5870272/94‑1 (MQ=60)
CGCGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATG > SRR4302536.2235446/1‑94 (MQ=60)
CGCGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGG > SRR4302536.708878/1‑94 (MQ=60)
CGCCTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCA < SRR4302536.1122784/94‑1 (MQ=60)
GCCTGGCGATCTTCCCCCTGCGCAAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCA < SRR4302536.2377165/94‑1 (MQ=60)
CTGGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAAT > SRR4302536.6114244/1‑94 (MQ=60)
GGCGATCTTCCACCTGCG‑CAAAGAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTGCGACCACGTGGTGAAAATGGTCGAGATGGGCAAAGAC < SRR4302536.5951183/94‑1 (MQ=60)
GGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAC < SRR4302536.6185080/94‑1 (MQ=60)
GGCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAC < SRR4302536.6479939/94‑1 (MQ=60)
GCCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATAC < SRR4302536.4368422/94‑1 (MQ=60)
GCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCTCGTGGTGAAAATGGTCGAGATGGGCAAATACG < SRR4302536.2469032/94‑1 (MQ=60)
GCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACG < SRR4302536.2554480/94‑1 (MQ=60)
GCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACG < SRR4302536.6070728/94‑1 (MQ=60)
GCGATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACG > SRR4302536.5044311/1‑94 (MQ=60)
GATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT < SRR4302536.3526976/94‑1 (MQ=60)
GATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAT < SRR4302536.3761476/94‑1 (MQ=60)
GATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGAA > SRR4302536.5080617/1‑94 (MQ=60)
ATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGGTA > SRR4302536.2075493/1‑94 (MQ=60)
ATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATA > SRR4302536.6125864/1‑94 (MQ=60)
ATCTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATA < SRR4302536.1873521/94‑1 (MQ=60)
CTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAAT > SRR4302536.6095840/1‑94 (MQ=60)
CTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAAT < SRR4302536.1697907/94‑1 (MQ=60)
CTTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAAT < SRR4302536.6527697/94‑1 (MQ=60)
TTCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATC < SRR4302536.4760592/94‑1 (MQ=60)
TCCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGAGCAAATACGATAATCA > SRR4302536.291129/1‑94 (MQ=60)
CCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCAT < SRR4302536.309975/94‑1 (MQ=60)
CCACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCAT < SRR4302536.1882556/94‑1 (MQ=60)
CACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATC > SRR4302536.6371522/1‑94 (MQ=60)
CACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATC < SRR4302536.4493878/94‑1 (MQ=60)
ACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCT > SRR4302536.6559477/1‑94 (MQ=60)
ACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCT < SRR4302536.4879683/94‑1 (MQ=60)
ACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCT < SRR4302536.3198353/94‑1 (MQ=60)
ACCTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCT < SRR4302536.115954/94‑1 (MQ=60)
CTGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGC < SRR4302536.3741932/94‑1 (MQ=60)
TGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT < SRR4302536.6784618/94‑1 (MQ=60)
TGCG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCT < SRR4302536.3291818/94‑1 (MQ=60)
GCG‑CAAAAAAGCCTACGCCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTG < SRR4302536.2065017/94‑1 (MQ=60)
CG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGG > SRR4302536.5122953/1‑94 (MQ=60)
CG‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGG < SRR4302536.3149699/94‑1 (MQ=60)
G‑CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGA > SRR4302536.5376086/1‑94 (MQ=60)
CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA < SRR4302536.6444613/94‑1 (MQ=60)
CAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > SRR4302536.4335964/1‑94 (MQ=60)
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CGAAACCATTATCAAGGCTGCCGCAGACCTGATCTCCCGTGATGCGCCGGATTATCAGTATCTCGCCGCGCGCCTGGCGATCTTCCACCTGCG‑TAAAAAAGCCTACGGCCAGTTTGAGCCGCCTGCGCTGTACGACCACGTGGTGAAAATGGTCGAGATGGGCAAATACGATAATCATCTGCTGGAA > NC_000913/2343061‑2343247
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
