Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,387,335 |
T→C |
V68A (GTA→GCA) |
b2275 → |
hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,387,335 | 0 | T | C | 98.4%
| 582.7
/ ‑1.1
| 184 | V68A (GTA→GCA) | b2275 | hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/2); new base C (81/100); total (82/102) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.40e-01 |
Only 100 of 187 total aligned reads displayed.
ACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATC > NC_000913/2387245‑2387424
|
cGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCAcc > 2:1857701/1‑93 (MQ=255)
cGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCAcc < 1:1506404/93‑1 (MQ=255)
ggAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCt < 1:1167159/93‑1 (MQ=255)
ggAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCt > 2:3269532/1‑93 (MQ=255)
gagaCTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTg > 2:4456173/1‑93 (MQ=255)
gagaCTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAAAGGCGAATCGCACCTg > 2:4219426/1‑93 (MQ=255)
gaCTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGcc < 2:4637905/93‑1 (MQ=255)
cgTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCttt < 1:3552549/92‑1 (MQ=255)
gTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCtttt > 2:4009741/1‑93 (MQ=255)
gTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCtttt > 2:3090478/1‑93 (MQ=255)
tttCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTc < 2:4045122/93‑1 (MQ=255)
tCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCa > 2:3486557/1‑93 (MQ=255)
tCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTACAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCa > 2:4623454/1‑93 (MQ=255)
ggTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGc > 2:3448067/1‑93 (MQ=255)
gTTTGTACTGGCCTATTGGTAACGACTATAAACTTCCTATAGTGTGCGAAACGTCCCAGGGCGAATGGCCACTCCCACCTGCCTTTTCCAGCa < 2:4157449/93‑1 (MQ=255)
tGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTa > 1:4573550/1‑93 (MQ=255)
tGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTa < 2:1595522/93‑1 (MQ=255)
tACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTaag < 1:1716517/93‑1 (MQ=255)
tACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTaag < 1:227538/93‑1 (MQ=255)
aCTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTaaga < 2:3837920/93‑1 (MQ=255)
cTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTaagaa > 1:310903/1‑93 (MQ=255)
gggCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTaagaag < 2:3700246/92‑1 (MQ=255)
ggCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGTCGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGt > 1:3550905/1‑93 (MQ=255)
ggCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGt < 2:2884816/93‑1 (MQ=255)
ggCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGt < 2:3296606/93‑1 (MQ=255)
ccTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTc > 2:1113276/1‑93 (MQ=255)
ccTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTc < 1:1394464/93‑1 (MQ=255)
cTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCg > 2:3950752/1‑93 (MQ=255)
tATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCga > 1:3540207/1‑93 (MQ=255)
aTTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCgaa < 1:2914185/93‑1 (MQ=255)
aTTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCgaa < 1:4493887/93‑1 (MQ=255)
gTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAAt < 2:2080114/93‑1 (MQ=255)
tCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATg > 1:4373423/1‑93 (MQ=255)
cAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATgg > 2:4248707/1‑93 (MQ=255)
aGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGc < 1:3010916/93‑1 (MQ=255)
aGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGc < 1:3494624/93‑1 (MQ=255)
ggAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCt > 1:363465/1‑93 (MQ=255)
gAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTg > 2:2967772/1‑93 (MQ=255)
gAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTg > 1:3863651/1‑93 (MQ=255)
gCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGa < 2:1529556/93‑1 (MQ=255)
cATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGaa < 1:308227/93‑1 (MQ=255)
aTAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAg < 1:2555353/93‑1 (MQ=255)
tAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGt > 2:2519250/1‑93 (MQ=255)
aaCTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGa > 1:1505333/1‑93 (MQ=255)
aaCTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGa > 2:1743852/1‑93 (MQ=255)
aaCTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGa > 1:2033556/1‑93 (MQ=255)
aCTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGaa > 2:3163668/1‑93 (MQ=255)
aCTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGaa > 2:2295988/1‑93 (MQ=255)
aCTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGaa < 1:2339219/93‑1 (MQ=255)
aCTACCGATAGTGTGCGAAACGTACCAAGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGaa < 1:653784/93‑1 (MQ=255)
ataGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAatgatgct > 1:4697081/1‑91 (MQ=255)
taGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAatgatgatg > 2:4294187/1‑93 (MQ=255)
taGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAatgatgatg > 2:1803956/1‑93 (MQ=255)
gtgtGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATgatgatgat > 2:2687304/1‑93 (MQ=255)
tgtgCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATc > 2:626738/1‑93 (MQ=255)
tacGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATccc < 1:3161104/91‑1 (MQ=255)
cGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCa < 1:2284873/93‑1 (MQ=255)
cGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCa < 2:1775254/93‑1 (MQ=255)
gAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCAt < 2:3457126/93‑1 (MQ=255)
gAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCAt > 1:1858502/1‑93 (MQ=255)
gAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCAt > 2:2823113/1‑93 (MQ=255)
aaCGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGa > 1:2248179/1‑93 (MQ=255)
aaCGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGa > 1:3750176/1‑93 (MQ=255)
aaCGTACCATAGCGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGa < 2:3618836/93‑1 (MQ=255)
cGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGaaa < 1:1804804/93‑1 (MQ=255)
gTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGaaaa < 1:2804781/93‑1 (MQ=255)
gTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGaaaa > 2:832375/1‑93 (MQ=255)
tACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAt < 1:1132297/93‑1 (MQ=255)
tACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAt < 2:1628745/93‑1 (MQ=255)
aCCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATg < 1:2490772/93‑1 (MQ=255)
cATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGc > 2:1379255/1‑93 (MQ=255)
aTGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCa < 2:104554/93‑1 (MQ=255)
aTGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCa > 2:1157268/1‑93 (MQ=255)
aTGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCa < 2:1392697/93‑1 (MQ=255)
tGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCAt < 2:94887/93‑1 (MQ=255)
tGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCAt > 2:1637260/1‑93 (MQ=255)
ggcGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATc < 2:2226186/91‑1 (MQ=255)
gACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATc < 2:463154/93‑1 (MQ=255)
gACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCGTc < 2:875401/93‑1 (MQ=255)
gACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATc < 1:981864/93‑1 (MQ=255)
gACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATc < 1:862237/93‑1 (MQ=255)
gACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATc < 1:737882/93‑1 (MQ=255)
gACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATc < 2:736848/93‑1 (MQ=255)
aCGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCa < 1:4144868/93‑1 (MQ=255)
gAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCACCATGAAAATGGCATCAGc > 1:1032902/1‑93 (MQ=255)
gAATGGCGAATCGCCCCTGCCTTTTCCGGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGc < 1:1357435/93‑1 (MQ=255)
gAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGc < 2:4410798/93‑1 (MQ=255)
aaTGGCGAATCGCACCTGCCTTTTCCAGCATTAGGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCa > 1:1427641/1‑93 (MQ=255)
aaTGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCa > 2:1828985/1‑93 (MQ=255)
aaTGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCa < 1:3314064/93‑1 (MQ=255)
aTGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCAt > 2:3892897/1‑93 (MQ=255)
aTGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCAt < 2:2817753/93‑1 (MQ=255)
aTGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCAt > 1:2592931/1‑93 (MQ=255)
gCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGa > 1:668407/1‑93 (MQ=255)
cGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGaa < 2:2451368/93‑1 (MQ=255)
aaTCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGa < 1:4255857/93‑1 (MQ=255)
aTCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCTCATGAAAATGGCATCAGCATCGAAGAt > 2:2584989/1‑93 (MQ=255)
aTCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGAt > 1:4736639/1‑93 (MQ=255)
tCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATc < 1:1215112/93‑1 (MQ=255)
tCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAATGAATAATGATGATCCCCATGAAAATGGCATCAGCATCGAAGAta > 1:1606524/1‑92 (MQ=255)
|
ACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATC > NC_000913/2387245‑2387424
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGA > NC_000913/2387243‑2387428
|
TAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCA < SRR4302544.4661172/94‑1 (MQ=60)
TAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCA < SRR4302544.671050/94‑1 (MQ=60)
AACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCAC < SRR4302544.672790/94‑1 (MQ=60)
AACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCAC > SRR4302544.3259022/1‑94 (MQ=60)
CGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCT < SRR4302544.2320943/94‑1 (MQ=60)
CGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCT < SRR4302544.1521334/94‑1 (MQ=60)
GGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTG < SRR4302544.1178799/94‑1 (MQ=60)
CTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATAGCGAATCGCACCTGCCTTT > SRR4302544.4743965/1‑94 (MQ=60)
TGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTT < SRR4302544.3167929/94‑1 (MQ=60)
CGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTT < SRR4302544.3586579/94‑1 (MQ=60)
GGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCA > SRR4302544.726088/1‑94 (MQ=60)
TTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTA > SRR4302544.4619127/1‑94 (MQ=60)
GTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAG < SRR4302544.1824081/94‑1 (MQ=60)
TACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGA < SRR4302544.229899/94‑1 (MQ=60)
TACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGA < SRR4302544.1733392/94‑1 (MQ=60)
ACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAA > SRR4302544.314132/1‑94 (MQ=60)
TGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGTCGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGT > SRR4302544.3584914/1‑94 (MQ=60)
GGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTT > SRR4302544.3544173/1‑94 (MQ=60)
CCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCG < SRR4302544.1408376/94‑1 (MQ=60)
CTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGA > SRR4302544.3574084/1‑94 (MQ=60)
ATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAG < SRR4302544.2942212/94‑1 (MQ=60)
ATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAG < SRR4302544.4538994/94‑1 (MQ=60)
TTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGA < SRR4302544.1419377/94‑1 (MQ=60)
GGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAAT > SRR4302544.2852326/1‑94 (MQ=60)
GTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATG < SRR4302544.3968800/94‑1 (MQ=60)
GTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATG > SRR4302544.4722153/1‑94 (MQ=60)
GTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATG > SRR4302544.4417759/1‑94 (MQ=60)
AGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCT > SRR4302544.367185/1‑94 (MQ=60)
AGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCT < SRR4302544.3039775/94‑1 (MQ=60)
AGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCT < SRR4302544.3527945/94‑1 (MQ=60)
GGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTG > SRR4302544.3902007/1‑94 (MQ=60)
GCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAA < SRR4302544.2713084/94‑1 (MQ=60)
GCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAA > SRR4302544.204392/1‑94 (MQ=60)
CATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAG < SRR4302544.311427/94‑1 (MQ=60)
ATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGT < SRR4302544.2579888/94‑1 (MQ=60)
ATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGT < SRR4302544.2593214/94‑1 (MQ=60)
TAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCCCCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTG < SRR4302544.2198703/94‑1 (MQ=60)
TAAACTACCTATAGTGTGCGAAACGTACCATGACGAAGGGCGAAGCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTG < SRR4302544.1405568/94‑1 (MQ=60)
AAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGA > SRR4302544.1520242/1‑94 (MQ=60)
AAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGA > SRR4302544.2053225/1‑94 (MQ=60)
ACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAAT < SRR4302544.2361382/94‑1 (MQ=60)
ACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAAT < SRR4302544.660254/94‑1 (MQ=60)
ACTACCGATAGTGTGCGAAACGTACCAAGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAAT < SRR4302544.660253/94‑1 (MQ=60)
CTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCTCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATG < SRR4302544.3011554/94‑1 (MQ=60)
CTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGA < SRR4302544.1704329/94‑1 (MQ=60)
TATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCAGCTGCCTTTTCCAGGATTAAGAAGTTCGAAGCATGGCTGGAAGcgcagagttgt > SRR4302544.4743452/1‑83 (MQ=60)
TATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGCT > SRR4302544.4743451/1‑94 (MQ=60)
TAGTGTGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGA < SRR4302544.2443391/94‑1 (MQ=60)
TGCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCC < SRR4302544.1538706/94‑1 (MQ=60)
TACGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCC < SRR4302544.3191167/94‑1 (MQ=60)
GCGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCA < SRR4302544.3412965/94‑1 (MQ=60)
CGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCAT > SRR4302544.1876473/1‑94 (MQ=60)
CGAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCAT < SRR4302544.2306410/94‑1 (MQ=60)
gacccgtcCCATGACGACTGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATG < SRR4302544.4246204/86‑1 (MQ=60)
GAAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATG < SRR4302544.93880/94‑1 (MQ=60)
AAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGA > SRR4302544.2269310/1‑94 (MQ=60)
AAACGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGA > SRR4302544.3787423/1‑94 (MQ=60)
CGTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAA < SRR4302544.1822438/94‑1 (MQ=60)
GTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAT < SRR4302544.2831821/94‑1 (MQ=60)
GTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAT > SRR4302544.4437112/1‑94 (MQ=60)
GTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAT > SRR4302544.1453022/1‑94 (MQ=60)
GTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAT > SRR4302544.4299678/1‑94 (MQ=60)
CTACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAAT < SRR4302544.855945/94‑1 (MQ=60)
TACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATG < SRR4302544.1143571/94‑1 (MQ=60)
ACCATGACGAATGGCGGATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGG > SRR4302544.3773353/1‑94 (MQ=60)
ACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGG < SRR4302544.2514629/94‑1 (MQ=60)
ACCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGC > SRR4302544.1186436/1‑94 (MQ=60)
CCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGC > SRR4302544.3130589/1‑94 (MQ=60)
CCATGACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGC < SRR4302544.2562404/94‑1 (MQ=60)
GACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCA < SRR4302544.991488/94‑1 (MQ=60)
GACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCA < SRR4302544.3802008/94‑1 (MQ=60)
GACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCA < SRR4302544.870767/94‑1 (MQ=60)
GACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCA < SRR4302544.745102/94‑1 (MQ=60)
ACGAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAG < SRR4302544.4185900/94‑1 (MQ=60)
CGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCACCATGAAAATGGCATCAGC > SRR4302544.1043178/1‑94 (MQ=60)
GAATGGCGAATCGCCCCTGCCTTTTCCGGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCA < SRR4302544.1370904/94‑1 (MQ=60)
GAATGGCGAATCGCACCTGCCTTTTCCAGCATTAGGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCA > SRR4302544.1441842/1‑94 (MQ=60)
GAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCA > SRR4302544.535907/1‑94 (MQ=60)
GAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCA < SRR4302544.1370903/94‑1 (MQ=60)
GAATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCA > SRR4302544.228784/1‑94 (MQ=60)
AATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCAT > SRR4302544.2617874/1‑94 (MQ=60)
AATGGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCAT < SRR4302544.3345622/94‑1 (MQ=60)
GGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGA > SRR4302544.675007/1‑94 (MQ=60)
GGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGA < SRR4302544.36292/94‑1 (MQ=60)
GGCGAATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGA > SRR4302544.1173738/1‑94 (MQ=60)
AATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGAT < SRR4302544.1779741/94‑1 (MQ=60)
AATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGAT > SRR4302544.4783334/1‑94 (MQ=60)
AATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGAT < SRR4302544.4299240/94‑1 (MQ=60)
AATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATAATGATCCCCATGAAAATGGCATCAGCATCGAAGAT < SRR4302544.3580723/94‑1 (MQ=60)
ATCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAATGAATAATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATA > SRR4302544.1622360/1‑94 (MQ=60)
TCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCA > SRR4302544.721239/1‑94 (MQ=60)
TCGCACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCA < SRR4302544.1227138/94‑1 (MQ=60)
CACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATGAAGA > SRR4302544.1669649/1‑94 (MQ=60)
CACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGA > SRR4302544.2770778/1‑94 (MQ=60)
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TAACGGAGACTGTTTCGGTTTGTACTGGCCTATTGGTCAGGAGCATAAACTACCTATAGTGTGCGAAACGTACCATGACGAATGGCGAATCGTACCTGCCTTTTCCAGCATTAAGAAGTTCGAAGAATGGCTGGAAGTGAATGATGATGATCCCCATGAAAATGGCATCAGCATCGAAGATCAAGA > NC_000913/2387243‑2387428
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
