Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,417,813 |
T→C |
intergenic (‑8/+48) |
b2300 ← / ← yfcF |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,417,813 | 0 | T | C | 99.3%
| 476.0
/ NA
| 146 | intergenic (‑8/+48) | b2300/yfcF | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (74/71); minor base A (0/1); total (74/72) |
| Fisher's exact test for biased strand distribution p-value = 4.93e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 169 total aligned reads displayed.
GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC > NC_000913/2417723‑2417902
|
aCCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccctc > 2:1212796/1‑93 (MQ=255)
ccGCTTTGGGCAAACAACTCCAGAACGCGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg < 2:3469911/93‑1 (MQ=255)
cGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgt > 2:473076/1‑93 (MQ=255)
gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc < 1:69514/93‑1 (MQ=255)
gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc > 2:2725906/1‑93 (MQ=255)
ccTTTGGACAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc < 1:69513/92‑1 (MQ=255)
tttGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGa > 2:4162562/1‑93 (MQ=255)
tttGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGa > 2:1639752/1‑93 (MQ=255)
ttGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGaa > 2:3195117/1‑93 (MQ=255)
tGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGaaa > 2:757167/1‑93 (MQ=255)
cAAACAACTTCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAc < 2:2727698/93‑1 (MQ=255)
aaaCAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCATCCCTCGTCGAAAAAACg > 2:1012983/1‑93 (MQ=255)
aaaCAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACg > 1:294026/1‑93 (MQ=255)
aacaacTCCAGAACATGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAACACGt < 2:2524898/93‑1 (MQ=255)
aacaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGt < 2:2524899/93‑1 (MQ=255)
aacaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGt > 1:1985614/1‑93 (MQ=255)
caacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTaa < 2:1357863/93‑1 (MQ=255)
acgccAGAACACATTCCGTCGCCGCTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGc < 2:574774/90‑1 (MQ=255)
acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGc > 1:3321062/1‑93 (MQ=255)
acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGGTTCATCACTCACCCCTCGTCGAAGAAACGTAAGc > 1:1032024/1‑93 (MQ=255)
cTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCt > 1:4343987/1‑93 (MQ=255)
cTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCt > 2:429394/1‑93 (MQ=255)
cgaGAACACTTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt < 1:4494260/91‑1 (MQ=255)
ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt < 1:3717601/93‑1 (MQ=255)
ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt > 2:2415773/1‑93 (MQ=255)
cAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg > 1:2266105/1‑93 (MQ=255)
cAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg > 1:306289/1‑93 (MQ=255)
cAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg > 2:3889813/1‑93 (MQ=255)
cAGAACACCTTCCGTCGCCCGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATg < 2:1806851/93‑1 (MQ=255)
aGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGa < 2:1926840/93‑1 (MQ=255)
aGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGa > 2:3112485/1‑93 (MQ=255)
gAACACGTTCCGTCGCCTGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt < 1:1353329/93‑1 (MQ=255)
gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt < 1:2332252/93‑1 (MQ=255)
acacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAc < 1:3192944/93‑1 (MQ=255)
acacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAc > 2:2195853/1‑93 (MQ=255)
cacGTGCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACt < 1:51458/93‑1 (MQ=255)
gTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGa < 1:195370/93‑1 (MQ=255)
ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt > 2:3965320/1‑93 (MQ=255)
ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc > 2:2152849/1‑93 (MQ=255)
ccgcGCCGGGAACGAACCATGAATGGCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCt < 1:1507932/90‑1 (MQ=255)
cGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCt < 1:4010531/93‑1 (MQ=255)
gTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTg > 1:1765187/1‑93 (MQ=255)
gTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTg > 1:2449639/1‑93 (MQ=255)
tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt > 1:4151190/1‑93 (MQ=255)
tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt < 1:626905/93‑1 (MQ=255)
cGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTc > 1:3372514/1‑93 (MQ=255)
gCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCg > 2:716263/1‑93 (MQ=255)
gCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCg > 1:2189668/1‑93 (MQ=255)
ccGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGt < 2:2595148/93‑1 (MQ=255)
ccGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGt < 1:791888/93‑1 (MQ=255)
cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt < 1:2488407/93‑1 (MQ=255)
cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt > 2:3615066/1‑93 (MQ=255)
ggTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGttc > 2:2793183/1‑92 (MQ=255)
gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc < 2:2072063/93‑1 (MQ=255)
gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc > 1:1449842/1‑93 (MQ=255)
tAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCt < 2:3304955/93‑1 (MQ=255)
tAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCt > 1:1278817/1‑93 (MQ=255)
cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc < 1:2539777/93‑1 (MQ=255)
aCCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAg < 1:92459/93‑1 (MQ=255)
aCCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAg > 1:2710022/1‑93 (MQ=255)
cccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGc > 1:1433488/1‑93 (MQ=255)
cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa < 1:2051991/93‑1 (MQ=255)
cATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCa < 1:3819609/93‑1 (MQ=255)
aTGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAg > 1:3022375/1‑93 (MQ=255)
aTGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAg > 1:177456/1‑93 (MQ=255)
tGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa > 2:930956/1‑93 (MQ=255)
tGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa < 1:1217492/93‑1 (MQ=255)
tGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGa < 1:4025258/93‑1 (MQ=255)
gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt < 1:1115613/93‑1 (MQ=255)
tCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCtt > 2:3575888/1‑93 (MQ=255)
ccGATGCAACCATCAGTTCCATCACTCACACCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc < 2:2275205/93‑1 (MQ=255)
ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc < 2:2275204/93‑1 (MQ=255)
ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc < 1:1242580/93‑1 (MQ=255)
ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc < 1:4641798/93‑1 (MQ=255)
ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc > 2:2103275/1‑93 (MQ=255)
ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc < 2:1854305/93‑1 (MQ=255)
gATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGc > 2:3414034/1‑93 (MQ=255)
tGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCg < 2:4441930/93‑1 (MQ=255)
gCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCACCCAGATTGCTTCGCCGa > 1:1290448/1‑93 (MQ=255)
aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa < 1:1064821/93‑1 (MQ=255)
aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa > 1:3553614/1‑93 (MQ=255)
aaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAg > 1:120873/1‑93 (MQ=255)
aCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAgg > 1:58665/1‑92 (MQ=255)
ataaGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGc < 2:3355214/90‑1 (MQ=255)
aTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGc > 1:2521175/1‑93 (MQ=255)
tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa > 2:45702/1‑93 (MQ=255)
cAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCaa > 2:4671180/1‑93 (MQ=255)
ttCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaa < 1:54352/93‑1 (MQ=255)
tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa > 2:502959/1‑93 (MQ=255)
tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa < 1:4545814/93‑1 (MQ=255)
catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc < 2:4456236/93‑1 (MQ=255)
cactcaccCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCt < 1:585569/93‑1 (MQ=255)
actcacccCTCGTCGAAAAAACGTAAGCTATGATACTTGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg < 1:3694839/93‑1 (MQ=255)
actcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg < 1:507657/93‑1 (MQ=255)
actcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg < 2:1590963/93‑1 (MQ=255)
actcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTg < 2:2673598/93‑1 (MQ=255)
ctcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTgg < 1:3739396/93‑1 (MQ=255)
tcacccCGCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGa < 1:2762496/93‑1 (MQ=255)
cacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAc > 2:438324/1‑93 (MQ=255)
cacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAc < 1:2152008/93‑1 (MQ=255)
|
GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC > NC_000913/2417723‑2417902
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA > NC_000913/2417720‑2417905
|
TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACC > SRR4302544.1347100/1‑94 (MQ=60)
GGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCC > SRR4302544.2396773/1‑94 (MQ=60)
CACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTC < SRR4302544.560353/94‑1 (MQ=60)
CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC < SRR4302544.250066/94‑1 (MQ=60)
GCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCG < SRR4302544.70197/94‑1 (MQ=60)
GCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCG < SRR4302544.3659468/94‑1 (MQ=60)
GCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCG > SRR4302544.4589494/1‑94 (MQ=60)
CCTTTGGACAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCG < SRR4302544.70196/94‑1 (MQ=60)
CAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACG > SRR4302544.297069/1‑94 (MQ=60)
AAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGACTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGT > SRR4302544.2237263/1‑94 (MQ=60)
AAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGT > SRR4302544.2004894/1‑94 (MQ=60)
AACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACGTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTA < SRR4302544.1249933/94‑1 (MQ=60)
AACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTA < SRR4302544.1102355/94‑1 (MQ=60)
AACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGC > SRR4302544.3352699/1‑94 (MQ=60)
AACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGGTTCATCACTCACCCCTCGTCGAAGAAACGTAAGC > SRR4302544.1042294/1‑94 (MQ=60)
ACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCT < SRR4302544.693415/94‑1 (MQ=60)
ACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCT > SRR4302544.4388161/1‑94 (MQ=60)
ACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCA > SRR4302544.1262940/1‑94 (MQ=60)
CTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTA > SRR4302544.632898/1‑94 (MQ=60)
TCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAT < SRR4302544.1492646/94‑1 (MQ=60)
TCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATG < SRR4302544.291820/94‑1 (MQ=60)
CGAGAACACTTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATG < SRR4302544.4539368/94‑1 (MQ=60)
CCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATG > SRR4302544.2287428/1‑94 (MQ=60)
CCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATG > SRR4302544.309463/1‑94 (MQ=60)
CCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATG < SRR4302544.3754582/94‑1 (MQ=60)
CCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATG < SRR4302544.381707/94‑1 (MQ=60)
GAACACGTTCCGTCGCCTGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATA < SRR4302544.1366746/94‑1 (MQ=60)
GAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATA < SRR4302544.2354367/94‑1 (MQ=60)
ACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACT < SRR4302544.3223374/94‑1 (MQ=60)
CACGTGCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTG < SRR4302544.51982/94‑1 (MQ=60)
ACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGG > SRR4302544.4681325/1‑94 (MQ=60)
GTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAT < SRR4302544.197342/94‑1 (MQ=60)
GTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAT < SRR4302544.197341/94‑1 (MQ=60)
CCG‑CGCCGGGAACGAACCATGAATGGCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTG < SRR4302544.1522883/94‑1 (MQ=60)
CGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTG > SRR4302544.2003215/1‑94 (MQ=60)
CGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTG < SRR4302544.4050427/94‑1 (MQ=60)
CGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTG > SRR4302544.1782459/1‑94 (MQ=60)
CGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTG > SRR4302544.2473004/1‑94 (MQ=60)
GTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGT > SRR4302544.4192295/1‑94 (MQ=60)
TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC < SRR4302544.633069/94‑1 (MQ=60)
TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC > SRR4302544.3404714/1‑94 (MQ=60)
CGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCG > SRR4302544.2210352/1‑94 (MQ=60)
GCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGT < SRR4302544.2568446/94‑1 (MQ=60)
CCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTT < SRR4302544.799554/94‑1 (MQ=60)
CGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG < SRR4302544.2512239/94‑1 (MQ=60)
GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC > SRR4302544.1464250/1‑94 (MQ=60)
GTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCT > SRR4302544.3734501/1‑94 (MQ=60)
GTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCT > SRR4302544.1291413/1‑94 (MQ=60)
CGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCA < SRR4302544.2564166/94‑1 (MQ=60)
GGCCCATGAATGTCCGATGCAAACATCAGTTCCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAG < SRR4302544.1646181/94‑1 (MQ=60)
GACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAG > SRR4302544.2736086/1‑94 (MQ=60)
ACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGC < SRR4302544.93320/94‑1 (MQ=60)
ACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGC > SRR4302544.1447754/1‑94 (MQ=60)
CCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCC < SRR4302544.790923/94‑1 (MQ=60)
CATGAATGTCCGATGCACACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG < SRR4302544.4256827/94‑1 (MQ=60)
CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG < SRR4302544.3857472/94‑1 (MQ=60)
CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG > SRR4302544.179213/1‑94 (MQ=60)
CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG < SRR4302544.2071745/94‑1 (MQ=60)
CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG > SRR4302544.3051333/1‑94 (MQ=60)
CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG > SRR4302544.3381202/1‑94 (MQ=60)
CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG > SRR4302544.3051332/1‑94 (MQ=60)
ATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGA < SRR4302544.913718/94‑1 (MQ=60)
TGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAT < SRR4302544.1229536/94‑1 (MQ=60)
TGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAT < SRR4302544.4065350/94‑1 (MQ=60)
GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT < SRR4302544.1126750/94‑1 (MQ=60)
ATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGC > SRR4302544.3059508/1‑94 (MQ=60)
GTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTT > SRR4302544.2058152/1‑94 (MQ=60)
TCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTC > SRR4302544.218398/1‑94 (MQ=60)
CCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCG < SRR4302544.1254842/94‑1 (MQ=60)
CCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCG < SRR4302544.4687772/94‑1 (MQ=60)
CGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGC > SRR4302544.2561710/1‑94 (MQ=60)
TGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCACCCAGATTGCTTCGCCGA > SRR4302544.1303152/1‑94 (MQ=60)
CAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAA > SRR4302544.3587656/1‑94 (MQ=60)
AAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAG < SRR4302544.1075407/94‑1 (MQ=60)
AAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAG > SRR4302544.535445/1‑94 (MQ=60)
AAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAG > SRR4302544.121972/1‑94 (MQ=60)
AACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGG > SRR4302544.59261/1‑94 (MQ=60)
CATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGC > SRR4302544.2545393/1‑94 (MQ=60)
CATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGC > SRR4302544.4126930/1‑94 (MQ=60)
TTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAA < SRR4302544.3226288/94‑1 (MQ=60)
TTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAA < SRR4302544.54902/94‑1 (MQ=60)
TCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAC > SRR4302544.1194022/1‑94 (MQ=60)
TCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAC < SRR4302544.4591223/94‑1 (MQ=60)
CATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACG < SRR4302544.4020584/94‑1 (MQ=60)
CATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACG < SRR4302544.246753/94‑1 (MQ=60)
CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG < SRR4302544.591313/94‑1 (MQ=60)
ACTCTCCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGG < SRR4302544.1355137/94‑1 (MQ=60)
ACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTTGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGG < SRR4302544.3731645/94‑1 (MQ=60)
ACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGG < SRR4302544.512655/94‑1 (MQ=60)
ACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGG < SRR4302544.4734281/94‑1 (MQ=60)
CTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGA < SRR4302544.3776562/94‑1 (MQ=60)
TCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC < SRR4302544.1383746/94‑1 (MQ=60)
TCACCCCGCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC < SRR4302544.2789068/94‑1 (MQ=60)
CACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACA < SRR4302544.2172485/94‑1 (MQ=60)
CCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA < SRR4302544.800776/94‑1 (MQ=60)
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TGGGCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA > NC_000913/2417720‑2417905
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
