Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I2 R1
|
1475 |
266.7 |
13469680 |
98.2% |
13227225 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,417,813 |
T→C |
intergenic (‑8/+48) |
b2300 ← / ← yfcF |
hypothetical protein/hypothetical protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,417,813 | 0 | T | C | 99.5%
| 699.6
/ ‑4.6
| 218 | intergenic (‑8/+48) | b2300/yfcF | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (108/108); total (110/108) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.83e-01 |
Only 100 of 243 total aligned reads displayed.
GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC > NC_000913/2417723‑2417902
|
cACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccct < 1:4470405/93‑1 (MQ=255)
aCCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGACGGTAACGACCCATGCAAGTCCGATGCAAACATCAGTTTCATCACTCAcccctc > 1:2679306/1‑93 (MQ=255)
aCCGCTTTGGGCAAACAACTCCAGAACACGTCCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCAcccctc < 1:4071203/93‑1 (MQ=255)
ccGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcg > 2:6522061/1‑93 (MQ=255)
gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc > 2:4781967/1‑93 (MQ=255)
gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc < 1:3779267/93‑1 (MQ=255)
gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc > 1:2988388/1‑93 (MQ=255)
gCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATCAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCtcgtc < 2:3555327/93‑1 (MQ=255)
ggCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACGCCTCGTCGaaaaa > 2:3008733/1‑93 (MQ=255)
cAAACACCTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCCCCCCTCGTCGAAAAAAc < 2:386978/93‑1 (MQ=255)
cAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAAc < 1:986529/93‑1 (MQ=255)
aacaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGt > 2:6613607/1‑93 (MQ=255)
acaacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTa > 1:3871697/1‑93 (MQ=255)
caacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTaa < 2:2634386/93‑1 (MQ=255)
caacTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTaa < 1:3676084/93‑1 (MQ=255)
acTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGc < 1:5998360/93‑1 (MQ=255)
acTCCAGAACACGTGCCGTCGCCGATAACGGCCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCTCCCCTCGTCGAAAAAACGTAAGc < 2:2304060/93‑1 (MQ=255)
acTCCAGAACACGCTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATTACTCACCCCTCGTCGAAAAAACGTAAGc > 1:1875077/1‑93 (MQ=255)
cTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCt > 2:1627141/1‑93 (MQ=255)
tCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTa > 2:6345360/1‑93 (MQ=255)
ccAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAt > 2:6476252/1‑93 (MQ=255)
aGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGa < 1:220076/93‑1 (MQ=255)
gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGCAAAAACGTAAGCTATgtt > 2:6037168/1‑91 (MQ=255)
gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt < 2:6098809/93‑1 (MQ=255)
gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt < 2:1148571/93‑1 (MQ=255)
gAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAt < 2:5099393/93‑1 (MQ=255)
acacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAc < 1:863101/93‑1 (MQ=255)
acacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAc > 2:1795143/1‑93 (MQ=255)
cacGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACt > 1:5307018/1‑93 (MQ=255)
cGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTgg < 2:2163349/93‑1 (MQ=255)
gTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGa > 1:4287690/1‑93 (MQ=255)
gTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGa > 2:181847/1‑93 (MQ=255)
gTTCCGTCGCCGGTAACGACCCATGAACGTCCGACGCAAACATCAGTTTCATCACTCACCCCTCGTCGCAAAAACGTAAGCTATGATACTGGa > 1:1005098/1‑93 (MQ=255)
ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt < 2:274428/93‑1 (MQ=255)
ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt > 1:5177959/1‑93 (MQ=255)
ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt > 2:50008/1‑93 (MQ=255)
ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt > 2:3353608/1‑93 (MQ=255)
ttCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAt > 1:6159616/1‑93 (MQ=255)
ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc < 1:5240715/93‑1 (MQ=255)
ccGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTc < 2:1053890/93‑1 (MQ=255)
cGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCt > 1:6045834/1‑93 (MQ=255)
gTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTg < 2:4020122/93‑1 (MQ=255)
tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt < 2:3193258/93‑1 (MQ=255)
tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt < 1:646850/93‑1 (MQ=255)
tCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGt > 1:1872781/1‑93 (MQ=255)
ccGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGt < 1:2787458/93‑1 (MQ=255)
cGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGtt < 1:3380677/93‑1 (MQ=255)
gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc > 1:6691828/1‑93 (MQ=255)
gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc < 1:6235408/93‑1 (MQ=255)
gTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGc > 1:1131757/1‑93 (MQ=255)
aaCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTa < 2:1131757/93‑1 (MQ=255)
aaCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTa < 2:5247175/93‑1 (MQ=255)
aaCGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTa < 1:3979699/93‑1 (MQ=255)
cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAACAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc < 1:784853/93‑1 (MQ=255)
cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc > 1:3437178/1‑93 (MQ=255)
cGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATc > 1:3000982/1‑93 (MQ=255)
ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc > 2:549230/1‑93 (MQ=255)
ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc > 2:6634644/1‑93 (MQ=255)
ccATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGcc > 1:1757127/1‑93 (MQ=255)
gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt < 2:3892164/93‑1 (MQ=255)
gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt < 2:5292663/93‑1 (MQ=255)
gAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAt < 1:5778582/93‑1 (MQ=255)
aaTGTTCGATGCAAACATCAGTTTNATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt < 1:1416603/93‑1 (MQ=255)
aaTGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGAtt < 2:4474830/93‑1 (MQ=255)
tGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGc < 2:1468532/93‑1 (MQ=255)
gTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCt < 2:1720795/93‑1 (MQ=255)
ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc > 1:3891799/1‑93 (MQ=255)
ccGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTc < 2:461915/93‑1 (MQ=255)
gATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGc > 1:3044692/1‑93 (MQ=255)
tGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCg > 2:4371154/1‑93 (MQ=255)
aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaag > 2:3402846/1‑92 (MQ=255)
aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa < 2:822607/93‑1 (MQ=255)
aaaCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGaaa > 2:1674038/1‑93 (MQ=255)
aaCATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAg > 2:56905/1‑93 (MQ=255)
aCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAgg > 1:116838/1‑92 (MQ=255)
aCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGt > 2:4282232/1‑93 (MQ=255)
aTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTga > 1:1309696/1‑92 (MQ=255)
aTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGc > 2:3624336/1‑93 (MQ=255)
tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATGAGCCAGATTGCTTCGCCGACAGTGCa > 1:6598704/1‑93 (MQ=255)
tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa > 1:1701427/1‑93 (MQ=255)
tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa > 1:2054846/1‑93 (MQ=255)
tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa > 1:2397135/1‑93 (MQ=255)
tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa < 1:5024699/93‑1 (MQ=255)
tCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCa > 1:5619032/1‑93 (MQ=255)
cAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCaa < 1:4695484/93‑1 (MQ=255)
aGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAt > 2:5602649/1‑93 (MQ=255)
tgcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaa < 2:2137112/91‑1 (MQ=255)
tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa < 2:2454189/93‑1 (MQ=255)
tcatcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATaaaa < 2:5398218/93‑1 (MQ=255)
catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc < 2:3254680/93‑1 (MQ=255)
catcaCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAAc < 2:4893195/93‑1 (MQ=255)
tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc < 1:4782817/93‑1 (MQ=255)
tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc < 2:1433296/93‑1 (MQ=255)
tcactcacCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGc > 2:6194684/1‑93 (MQ=255)
cactcaccCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCt < 1:3631532/93‑1 (MQ=255)
cactcaccCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCAATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCt < 2:4820492/93‑1 (MQ=255)
tcacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGa > 2:4216262/1‑93 (MQ=255)
cacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAc > 2:5123308/1‑93 (MQ=255)
cacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGCGCAATAAAACGCTGGAc > 2:743397/1‑93 (MQ=255)
cacccCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCCAAAGTGCAATAAAACGCTGGAc > 2:2690120/1‑93 (MQ=255)
|
GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC > NC_000913/2417723‑2417902
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGAC > NC_000913/2417723‑2417906
|
GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCT < SRR4302536.1848217/94‑1 (MQ=60)
CACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTC > SRR4302536.2811312/1‑94 (MQ=60)
CACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTC < SRR4302536.4604698/94‑1 (MQ=60)
CACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGACGGTAACGACCCATGCAAGTCCGATGCAAACATCAGTTTCATCACTCACCCCTC > SRR4302536.2759375/1‑94 (MQ=60)
ACCGCTTTGGGCAAACAACTCCAGAACACGTCCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCG < SRR4302536.4191857/94‑1 (MQ=60)
CGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTC > SRR4302536.3076319/1‑94 (MQ=60)
GCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCG < SRR4302536.4147703/94‑1 (MQ=60)
GCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCG < SRR4302536.3892035/94‑1 (MQ=60)
GGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAA < SRR4302536.4594384/94‑1 (MQ=60)
CAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACG < SRR4302536.1015637/94‑1 (MQ=60)
CAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGATTCATCACTCACCCCTCGTCGAAAAAACG > SRR4302536.6399558/1‑94 (MQ=60)
AAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGT > SRR4302536.1931469/1‑94 (MQ=60)
AAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGA > SRR4302536.1441677/1‑94 (MQ=60)
AACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTA > SRR4302536.3986854/1‑94 (MQ=60)
CAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAG < SRR4302536.3785985/94‑1 (MQ=60)
AACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGC > SRR4302536.4293456/1‑94 (MQ=60)
AACTCCAGAACACGCTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATTACTCACCCCTCGTCGAAAAAACGTAAGC > SRR4302536.1931508/1‑94 (MQ=60)
ACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCT < SRR4302536.6177172/94‑1 (MQ=60)
TCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTAT > SRR4302536.223155/1‑94 (MQ=60)
CCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATG < SRR4302536.308580/94‑1 (MQ=60)
CAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGA > SRR4302536.5457799/1‑94 (MQ=60)
AGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGAT < SRR4302536.225915/94‑1 (MQ=60)
GAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATA > SRR4302536.4920622/1‑94 (MQ=60)
GAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATA < SRR4302536.3770151/94‑1 (MQ=60)
GAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATA > SRR4302536.3563809/1‑94 (MQ=60)
AACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATAC > SRR4302536.3798224/1‑94 (MQ=60)
ACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACT > SRR4302536.5465391/1‑94 (MQ=60)
ACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACT < SRR4302536.888473/94‑1 (MQ=60)
ACACGTTCCGTCGCCCGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACT < SRR4302536.6832241/94‑1 (MQ=60)
CACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAATCATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTG > SRR4302536.4768398/1‑94 (MQ=60)
CGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGA > SRR4302536.4415776/1‑94 (MQ=60)
CGTTCCGTCGCCGGTAACGACCCATGAACGTCCGACGCAAACATCAGTTTCATCACTCACCCCTCGTCGCAAAAACGTAAGCTATGATACTGGA > SRR4302536.1034755/1‑94 (MQ=60)
GTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAT > SRR4302536.5332428/1‑94 (MQ=60)
GTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGAT > SRR4302536.6343111/1‑94 (MQ=60)
TTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATT < SRR4302536.5578495/94‑1 (MQ=60)
CCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCCCCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCT < SRR4302536.1812048/94‑1 (MQ=60)
CCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCT > SRR4302536.6226160/1‑94 (MQ=60)
CCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCT < SRR4302536.5396858/94‑1 (MQ=60)
GTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGACAAAACGTAAGCTATGATACTGGATTCTGT > SRR4302536.5345798/1‑94 (MQ=60)
GTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGT > SRR4302536.1275874/1‑94 (MQ=60)
GTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGT > SRR4302536.1929159/1‑94 (MQ=60)
GTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGT < SRR4302536.5011281/94‑1 (MQ=60)
CTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGT < SRR4302536.6881070/94‑1 (MQ=60)
TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC < SRR4302536.3926383/94‑1 (MQ=60)
TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC < SRR4302536.665886/94‑1 (MQ=60)
TCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTC > SRR4302536.1564629/1‑94 (MQ=60)
CGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATTCTGGATTCTGTCG < SRR4302536.5316499/94‑1 (MQ=60)
CCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTT < SRR4302536.2870226/94‑1 (MQ=60)
CGTTAACGACCCATGAATGTCCGATGCAAACATCAGTTCCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG < SRR4302536.6224518/94‑1 (MQ=60)
CGGTAACGACCCATGAATGTCCGATGCAAACTTCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGCTG > SRR4302536.1707729/1‑94 (MQ=60)
CGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG < SRR4302536.3481143/94‑1 (MQ=60)
CGGTAACGACCCATGAATGTCCGATGCAAACATCAGCTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTG > SRR4302536.2880724/1‑94 (MQ=60)
GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC > SRR4302536.6890578/1‑94 (MQ=60)
GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC > SRR4302536.5877605/1‑94 (MQ=60)
GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC > SRR4302536.1165778/1‑94 (MQ=60)
GGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGC > SRR4302536.3996785/1‑94 (MQ=60)
GTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAACAAACGTAAGCTATGATACTGGATTCTGTCGTTGCT < SRR4302536.2181104/94‑1 (MQ=60)
GTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCT < SRR4302536.6421175/94‑1 (MQ=60)
GTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCT < SRR4302536.4405488/94‑1 (MQ=60)
TAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCGCTCCCCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTA < SRR4302536.3183750/94‑1 (MQ=60)
AACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTAT < SRR4302536.6459781/94‑1 (MQ=60)
AACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTAT < SRR4302536.4097848/94‑1 (MQ=60)
ACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATC > SRR4302536.3539524/1‑94 (MQ=60)
ACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATC > SRR4302536.3089207/1‑94 (MQ=60)
ACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATC > SRR4302536.3089208/1‑94 (MQ=60)
CGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAGAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCA > SRR4302536.3070686/1‑94 (MQ=60)
CGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAACAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCA < SRR4302536.807834/94‑1 (MQ=60)
CGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCA < SRR4302536.1727245/94‑1 (MQ=60)
CCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCC > SRR4302536.1809578/1‑94 (MQ=60)
CCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCC > SRR4302536.2734731/1‑94 (MQ=60)
CATGAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAG < SRR4302536.5234202/94‑1 (MQ=60)
GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT < SRR4302536.5950541/94‑1 (MQ=60)
GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT > SRR4302536.1800394/1‑94 (MQ=60)
GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT > SRR4302536.5456146/1‑94 (MQ=60)
GAATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATT < SRR4302536.3700158/94‑1 (MQ=60)
AATGTTCGATGCAAACATCAGTTTNATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTG < SRR4302536.1458706/94‑1 (MQ=60)
AATGTCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTG > SRR4302536.1190452/1‑94 (MQ=60)
TCCGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTC > SRR4302536.4007516/1‑94 (MQ=60)
CGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGC > SRR4302536.678939/1‑94 (MQ=60)
CGATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGC > SRR4302536.3134172/1‑94 (MQ=60)
ATGCAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCG > SRR4302536.5927115/1‑94 (MQ=60)
CAAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAA > SRR4302536.6648985/1‑94 (MQ=60)
AAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAG > SRR4302536.6325285/1‑94 (MQ=60)
AAACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAG > SRR4302536.4016336/1‑94 (MQ=60)
AACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGT < SRR4302536.471640/94‑1 (MQ=60)
AACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGT < SRR4302536.1155480/94‑1 (MQ=60)
AACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGT > SRR4302536.824703/1‑94 (MQ=60)
AACATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGG > SRR4302536.119921/1‑94 (MQ=60)
CATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAACGTGC > SRR4302536.4088431/1‑94 (MQ=60)
CATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGA > SRR4302536.1348788/1‑94 (MQ=60)
ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATGAGCCAGATTGCTTCGCCGACAGTGCA > SRR4302536.6794973/1‑94 (MQ=60)
ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA < SRR4302536.2558393/94‑1 (MQ=60)
ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA > SRR4302536.5785937/1‑94 (MQ=60)
ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA > SRR4302536.2116725/1‑94 (MQ=60)
ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA > SRR4302536.2469702/1‑94 (MQ=60)
ATCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCA > SRR4302536.1750665/1‑94 (MQ=60)
TCAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAA < SRR4302536.5175310/94‑1 (MQ=60)
CAGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAAT < SRR4302536.4836683/94‑1 (MQ=60)
AGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATA < SRR4302536.319224/94‑1 (MQ=60)
AGTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATA < SRR4302536.1218334/94‑1 (MQ=60)
GTTTCATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAA < SRR4302536.982770/94‑1 (MQ=60)
GTTTCATCACTCACCACTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAA > SRR4302536.1987220/1‑94 (MQ=60)
GTTGCATCTCTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTGGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAA < SRR4302536.6838821/94‑1 (MQ=60)
tttccatACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAA < SRR4302536.4400864/87‑1 (MQ=60)
CATCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACG > SRR4302536.96464/1‑94 (MQ=60)
TCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCT < SRR4302536.69153/94‑1 (MQ=60)
TCACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCT < SRR4302536.4926819/94‑1 (MQ=60)
CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG > SRR4302536.240184/1‑94 (MQ=60)
CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG < SRR4302536.3740157/94‑1 (MQ=60)
CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG < SRR4302536.3501208/94‑1 (MQ=60)
CACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTG < SRR4302536.6292912/94‑1 (MQ=60)
ACTCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGG < SRR4302536.5996343/94‑1 (MQ=60)
TCACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGAC > SRR4302536.3869078/1‑94 (MQ=60)
CACCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACA > SRR4302536.1117143/1‑94 (MQ=60)
CCCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGA > SRR4302536.2975116/1‑94 (MQ=60)
CCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGAC < SRR4302536.1935122/94‑1 (MQ=60)
CCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGAC < SRR4302536.4387354/94‑1 (MQ=60)
CCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGAC < SRR4302536.2432320/94‑1 (MQ=60)
CCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGAC > SRR4302536.138855/1‑94 (MQ=60)
CCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGAC > SRR4302536.5923851/1‑94 (MQ=60)
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GCACCGCTTTGGGCAAACAACTCCAGAACACGTTCCGTCGCCGGTAACGACCCATGAATGTCCGATGCAAACATCAGTTTCATCACTCACTCCTCGTCGAAAAAACGTAAGCTATGATACTGGATTCTGTCGTTGCTATCAGCCAGATTGCTTCGCCGAAAGTGCAATAAAACGCTGGACAGAC > NC_000913/2417723‑2417906
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 2 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
