Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F1 I1 R1
|
1357 |
179.3 |
9500450 |
96.1% |
9129932 |
93.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,454,538 |
T→C |
N175N (AAT→AAC) |
b3325 → |
YheF |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,454,538 | 0 | T | C | 98.6%
| 697.2
/ ‑3.5
| 214 | N175N (AAT→AAC) | b3325 | YheF |
| Reads supporting (aligned to +/- strand): ref base T (2/1); new base C (99/112); total (101/113) |
| Fisher's exact test for biased strand distribution p-value = 6.03e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 219 total aligned reads displayed.
CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCT > NC_000913/3454449‑3454627
|
cAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACaaa > 1:3721037/1‑93 (MQ=255)
cAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACaaa < 2:647529/93‑1 (MQ=255)
cAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACaaa < 2:3648396/93‑1 (MQ=255)
cAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACaaa < 2:2618264/93‑1 (MQ=255)
aGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAc > 1:3989288/1‑93 (MQ=255)
gatgatGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACt > 2:760087/1‑93 (MQ=255)
tgatgGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGa < 1:3240017/93‑1 (MQ=255)
gatggatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGAt < 2:229974/93‑1 (MQ=255)
gatggatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGAt < 2:3084293/93‑1 (MQ=255)
atggatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGAtt < 2:3930184/93‑1 (MQ=255)
atggatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGAtt > 2:2339052/1‑93 (MQ=255)
ggatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGa < 2:1973979/93‑1 (MQ=255)
ggatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGa < 1:2930607/93‑1 (MQ=255)
gatgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGaa > 2:2792182/1‑93 (MQ=255)
tgCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGt < 1:3073001/93‑1 (MQ=255)
gCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTc > 1:1259010/1‑93 (MQ=255)
gggTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCAt > 1:4492766/1‑93 (MQ=255)
gggTAGCGTCGGTAATGTTGTGCATTATGAACCCTACAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCAt < 2:2767937/93‑1 (MQ=255)
tAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATaaa < 2:2141646/93‑1 (MQ=255)
aGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAg > 2:4032913/1‑93 (MQ=255)
gCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAgc > 2:985514/1‑93 (MQ=255)
cGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAgcg > 2:2426188/1‑93 (MQ=255)
ggTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGtt > 2:1363913/1‑93 (MQ=255)
ggTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGtt > 2:1064444/1‑93 (MQ=255)
ggTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGtt > 2:2233925/1‑93 (MQ=255)
ggTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGtt > 1:10329/1‑93 (MQ=255)
ggTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGtt < 1:1655430/93‑1 (MQ=255)
gTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTg > 1:3303722/1‑93 (MQ=255)
gTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTg > 1:1689002/1‑93 (MQ=255)
aaTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGAt < 1:1791469/93‑1 (MQ=255)
aaTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGAt > 1:990716/1‑93 (MQ=255)
aaTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGAt < 1:469735/93‑1 (MQ=255)
aTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATg > 2:1448305/1‑93 (MQ=255)
aTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATg < 1:328039/93‑1 (MQ=255)
aTGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTACACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATg < 1:2690120/93‑1 (MQ=255)
tgttgtGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGt > 1:4379657/1‑93 (MQ=255)
ttgtGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCa > 1:962491/1‑93 (MQ=255)
ttgtGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATATCa > 2:1870107/1‑93 (MQ=255)
tgtgCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCAt > 2:4444537/1‑93 (MQ=255)
gtgCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATc < 1:2809402/93‑1 (MQ=255)
gCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCgg > 2:3503801/1‑93 (MQ=255)
gCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGGTGATGTCATCgg > 1:2616211/1‑93 (MQ=255)
cATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGc < 1:4359054/93‑1 (MQ=255)
ttATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGcac > 2:2704261/1‑93 (MQ=255)
ttATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGcac > 2:1796402/1‑93 (MQ=255)
aTGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACag < 2:1668322/93‑1 (MQ=255)
tGACCCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACaga < 2:599813/93‑1 (MQ=255)
tGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACaga < 1:1960738/93‑1 (MQ=255)
gAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACagag > 1:1064005/1‑93 (MQ=255)
aaCCCTCCAACGTTCTTATTCTGGCCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAgaga < 2:3486082/93‑1 (MQ=255)
aaCCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAgaga < 1:2472227/93‑1 (MQ=255)
aaCCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAgaga > 2:950366/1‑93 (MQ=255)
aaCCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAgaga < 1:1089107/93‑1 (MQ=255)
aCCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGaa > 1:2644404/1‑93 (MQ=255)
aCCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGaa < 1:476935/93‑1 (MQ=255)
ccTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAaga > 1:1106777/1‑92 (MQ=255)
cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca > 2:1244254/1‑93 (MQ=255)
cTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagca < 1:499541/93‑1 (MQ=255)
tCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGGTTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcag > 1:2495708/1‑93 (MQ=255)
tCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcag > 2:527554/1‑93 (MQ=255)
ccAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcagc < 2:3581732/93‑1 (MQ=255)
ccAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcagc < 2:4393080/93‑1 (MQ=255)
ccAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcagc < 1:4231546/93‑1 (MQ=255)
ccAACGTTATTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAagcagc < 1:1595851/93‑1 (MQ=255)
cAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAgcagca > 2:4734135/1‑93 (MQ=255)
cAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAgcagca > 1:1249279/1‑93 (MQ=255)
aCGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCaaa > 1:343286/1‑93 (MQ=255)
ttCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAatta < 1:4049227/93‑1 (MQ=255)
ttCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAatta < 2:3296577/93‑1 (MQ=255)
ttATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTc > 1:3343228/1‑93 (MQ=255)
tATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCa < 1:609594/93‑1 (MQ=255)
tATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCa < 1:2301788/93‑1 (MQ=255)
aTTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCAt > 2:3716876/1‑93 (MQ=255)
aTTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCAt > 1:2087101/1‑93 (MQ=255)
ttCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATc < 2:537918/93‑1 (MQ=255)
tCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCt < 1:2427151/93‑1 (MQ=255)
cTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTg < 1:1884147/93‑1 (MQ=255)
cTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTg < 2:3756450/93‑1 (MQ=255)
tGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTgg > 1:2521898/1‑93 (MQ=255)
aCCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGaa < 1:846271/93‑1 (MQ=255)
cGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGTAata < 2:2467749/93‑1 (MQ=255)
cGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAata > 1:3647147/1‑93 (MQ=255)
cGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAata < 2:1290533/93‑1 (MQ=255)
cGTGCCTCCACCATTAACAAACTGATTGAAGTCCTAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCg < 1:4575497/93‑1 (MQ=255)
cGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCg < 2:2198544/93‑1 (MQ=255)
cGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCg < 2:2001623/93‑1 (MQ=255)
gTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGcat > 1:3681285/1‑91 (MQ=255)
gCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCa < 2:4520152/93‑1 (MQ=255)
ccTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATC‑GCCCACAGACACCGCAAATTATTTATCTGGAATATGCGTCAgg > 1:2527538/1‑92 (MQ=255)
cTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGc < 2:1710786/93‑1 (MQ=255)
cTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGc < 2:2666003/93‑1 (MQ=255)
tCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCg > 1:3645406/1‑93 (MQ=255)
tCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCg > 1:1679503/1‑93 (MQ=255)
caccaTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGa > 2:905702/1‑93 (MQ=255)
accaTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGaa < 2:1763430/93‑1 (MQ=255)
caTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGa < 2:4297402/93‑1 (MQ=255)
caTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGa < 1:3508019/93‑1 (MQ=255)
caTTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGa < 1:3910025/93‑1 (MQ=255)
ttAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGTAATATGCGTCAGCGGAAGAtc < 2:4672686/93‑1 (MQ=255)
ttAACAAACTGATTGAAGTCATAAAGAGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAta > 1:1447074/1‑92 (MQ=255)
|
CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGGCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCT > NC_000913/3454449‑3454627
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
BRESEQ :: bam2aln output
CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC > NC_000913/3454445‑3454631
|
CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAAT < SRR4302544.3116377/94‑1 (MQ=60)
CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAAC < SRR4302544.2040068/94‑1 (MQ=60)
CCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAA > SRR4302544.3758046/1‑94 (MQ=60)
CAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAAC > SRR4302544.4028999/1‑94 (MQ=60)
GGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACT < SRR4302544.3338475/94‑1 (MQ=60)
AGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACT < SRR4302544.268101/94‑1 (MQ=60)
ATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGA > SRR4302544.1105382/1‑94 (MQ=60)
TGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGAT < SRR4302544.3271032/94‑1 (MQ=60)
ATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTG < SRR4302544.4002797/94‑1 (MQ=60)
TGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGA > SRR4302544.3304107/1‑94 (MQ=60)
GGGTGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAA < SRR4302544.4445956/94‑1 (MQ=60)
GGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAA < SRR4302544.2958767/94‑1 (MQ=60)
TGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTC < SRR4302544.2353114/94‑1 (MQ=60)
TGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTC > SRR4302544.1271393/1‑94 (MQ=60)
TGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTC < SRR4302544.3102290/94‑1 (MQ=60)
GCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCA > SRR4302544.1351733/1‑94 (MQ=60)
CGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCAT > SRR4302544.4537867/1‑94 (MQ=60)
GGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAA > SRR4302544.2661770/1‑94 (MQ=60)
TAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAG < SRR4302544.4744675/94‑1 (MQ=60)
TAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAG < SRR4302544.2224014/94‑1 (MQ=60)
AGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGC < SRR4302544.1074146/94‑1 (MQ=60)
GTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCG > SRR4302544.1570898/1‑94 (MQ=60)
GTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCG > SRR4302544.91183/1‑94 (MQ=60)
TCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGT > SRR4302544.2472146/1‑94 (MQ=60)
CGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTT > SRR4302544.10427/1‑94 (MQ=60)
CGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTT > SRR4302544.1746288/1‑94 (MQ=60)
CGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTT < SRR4302544.1092687/94‑1 (MQ=60)
CGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGAGTT > SRR4302544.733152/1‑94 (MQ=60)
GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG < SRR4302544.1671754/94‑1 (MQ=60)
GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG > SRR4302544.1705663/1‑94 (MQ=60)
GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG > SRR4302544.3335191/1‑94 (MQ=60)
GGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTG > SRR4302544.3312125/1‑94 (MQ=60)
TAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGAT > SRR4302544.1000472/1‑94 (MQ=60)
TAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGAT > SRR4302544.210773/1‑94 (MQ=60)
AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG < SRR4302544.474330/94‑1 (MQ=60)
AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG < SRR4302544.1625180/94‑1 (MQ=60)
AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG < SRR4302544.1933896/94‑1 (MQ=60)
AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG < SRR4302544.3862758/94‑1 (MQ=60)
AATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATG < SRR4302544.1808977/94‑1 (MQ=60)
ATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGT > SRR4302544.4424029/1‑94 (MQ=60)
ATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGT < SRR4302544.331449/94‑1 (MQ=60)
ATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGT > SRR4302544.1693377/1‑94 (MQ=60)
ATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTACACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGT < SRR4302544.2715920/94‑1 (MQ=60)
GTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCA < SRR4302544.250583/94‑1 (MQ=60)
GTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCA > SRR4302544.3512149/1‑94 (MQ=60)
GTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCA > SRR4302544.971944/1‑94 (MQ=60)
TTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCAT > SRR4302544.997579/1‑94 (MQ=60)
TGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATC > SRR4302544.485286/1‑94 (MQ=60)
TGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATC < SRR4302544.4518527/94‑1 (MQ=60)
GTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG < SRR4302544.2836507/94‑1 (MQ=60)
GTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG < SRR4302544.571759/94‑1 (MQ=60)
TGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGGTGATGTCATCG‑G > SRR4302544.2641321/1‑94 (MQ=60)
CATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCA < SRR4302544.4403293/94‑1 (MQ=60)
CATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCA > SRR4302544.3717727/1‑94 (MQ=60)
CATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCA > SRR4302544.265152/1‑94 (MQ=60)
ATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCAC < SRR4302544.61146/94‑1 (MQ=60)
TTATGAACCCTCCGACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACA < SRR4302544.2346506/94‑1 (MQ=60)
TATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAG > SRR4302544.4422956/1‑94 (MQ=60)
ATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGA < SRR4302544.3733459/94‑1 (MQ=60)
TGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAG < SRR4302544.1979770/94‑1 (MQ=60)
TGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAG > SRR4302544.1074583/1‑94 (MQ=60)
AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAA < SRR4302544.1099936/94‑1 (MQ=60)
AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAA < SRR4302544.2495862/94‑1 (MQ=60)
AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAA < SRR4302544.3225866/94‑1 (MQ=60)
AACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAA > SRR4302544.2669759/1‑94 (MQ=60)
ACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAG < SRR4302544.481604/94‑1 (MQ=60)
ACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAG < SRR4302544.2634335/94‑1 (MQ=60)
CCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGA > SRR4302544.1117811/1‑94 (MQ=60)
CTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGGTTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAG > SRR4302544.2519620/1‑94 (MQ=60)
CTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAG < SRR4302544.504451/94‑1 (MQ=60)
CTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAG < SRR4302544.4033435/94‑1 (MQ=60)
CCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCA < SRR4302544.4274663/94‑1 (MQ=60)
CCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCA > SRR4302544.1261577/1‑94 (MQ=60)
CCAACGTTATTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCA < SRR4302544.1611568/94‑1 (MQ=60)
CAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAA > SRR4302544.3116422/1‑94 (MQ=60)
AACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAA > SRR4302544.346830/1‑94 (MQ=60)
CGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATT > SRR4302544.3639269/1‑94 (MQ=60)
GTTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTA > SRR4302544.2737672/1‑94 (MQ=60)
TTCTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTAT < SRR4302544.4089557/94‑1 (MQ=60)
CTTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTC > SRR4302544.3375106/1‑94 (MQ=60)
TTATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCA < SRR4302544.17054/94‑1 (MQ=60)
TATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCAT > SRR4302544.2107182/1‑94 (MQ=60)
TATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCAT < SRR4302544.615580/94‑1 (MQ=60)
TATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCAT < SRR4302544.2323522/94‑1 (MQ=60)
ATTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATC > SRR4302544.1156828/1‑94 (MQ=60)
TTCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCT > SRR4302544.1269510/1‑94 (MQ=60)
TCTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTG < SRR4302544.2450250/94‑1 (MQ=60)
CTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGG < SRR4302544.1902360/94‑1 (MQ=60)
CTGACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGG > SRR4302544.2546123/1‑94 (MQ=60)
GACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAA > SRR4302544.170840/1‑94 (MQ=60)
ACCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAAT < SRR4302544.854628/94‑1 (MQ=60)
CCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATA > SRR4302544.3683539/1‑94 (MQ=60)
CCGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTAGAATA > SRR4302544.3683538/1‑94 (MQ=60)
CGGTCGTGCCTCCACCATTAACAAACTGATTGATGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATAT < SRR4302544.4612589/94‑1 (MQ=60)
CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATAT > SRR4302544.3061704/1‑94 (MQ=60)
CGGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATAT < SRR4302544.2895900/94‑1 (MQ=60)
GGTCGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATG > SRR4302544.1384433/1‑94 (MQ=60)
CGTGCCTCCACCATTAACAAACTGATTGAAGTCCTAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGT < SRR4302544.4621089/94‑1 (MQ=60)
CGTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCAT > SRR4302544.3717999/1‑94 (MQ=60)
GTGCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTC < SRR4302544.3811122/94‑1 (MQ=60)
GCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCGCCCACAGACA‑‑CCGCAAATTATTTATCTGGAATATGCGTCAGG > SRR4302544.2551829/1‑94 (MQ=59)
GCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAG > SRR4302544.2532378/1‑94 (MQ=60)
GCCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAG > SRR4302544.2551828/1‑94 (MQ=60)
CCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGACGCAGCAAATTATTCATCTGGAATATGCGTCAGC > SRR4302544.4633055/1‑94 (MQ=60)
CCTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGC > SRR4302544.4221202/1‑94 (MQ=60)
CTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCG < SRR4302544.3480459/94‑1 (MQ=60)
CTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCG > SRR4302544.1696043/1‑94 (MQ=60)
CTCCACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCG > SRR4302544.3681780/1‑94 (MQ=60)
ACCATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAG < SRR4302544.3448070/94‑1 (MQ=60)
CATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAT < SRR4302544.3948871/94‑1 (MQ=60)
CATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAT < SRR4302544.3541482/94‑1 (MQ=60)
CATTAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGAT < SRR4302544.1816394/94‑1 (MQ=60)
ATTAACAAACTGATTGAAGTCATAAAGAGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATA > SRR4302544.1461461/1‑94 (MQ=60)
TAACAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTC < SRR4302544.4377571/94‑1 (MQ=60)
CAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC > SRR4302544.3995797/1‑94 (MQ=60)
CAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC > SRR4302544.3995796/1‑94 (MQ=60)
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CCGCCAGATGATGGATGCGGGTAGCGTCGGTAATGTTGTGCATTATGAACCCTCCAACGTTCTTATTCTGACCGGTCGTGCCTCCACCATTAATAAACTGATTGAAGTCATAAAGCGCGTTGATGTCATCG‑GCACAGAGAAGCAGCAAATTATTCATCTGGAATATGCGTCAGCGGAAGATCTCGCC > NC_000913/3454445‑3454631
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 0 ≤ ATCG/ATCG < 6 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
